Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y41D4B_18
         (1119 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17543288|ref|NP_500113.1| putative secreted or extracellular ...   629   e-179
gi|39587953|emb|CAE67972.1| Hypothetical protein CBG13578 [Caeno...   144   3e-33
gi|48060153|gb|AAL32241.2| Hypothetical protein Y41D4B.26 [Caeno...    91   5e-17
gi|25153722|ref|NP_741322.1| nuclear receptor NHR-92 family memb...    91   5e-17
gi|39587952|emb|CAE67971.1| Hypothetical protein CBG13577 [Caeno...    86   1e-15
gi|39587948|emb|CAE67967.1| Hypothetical protein CBG13573 [Caeno...    53   1e-05
gi|17543296|ref|NP_500108.1| delta-like 1 precursor family membe...    49   2e-04
gi|39593230|emb|CAE64700.1| Hypothetical protein CBG09483 [Caeno...    46   0.002
gi|39588406|emb|CAE72757.1| Hypothetical protein CBG20006 [Caeno...    45   0.004
gi|17540946|ref|NP_502148.1| Delta/Serrate/lag-2  protein and EG...    43   0.015
gi|50507827|emb|CAB07218.2| Hypothetical protein H02I12.4 [Caeno...    43   0.015
gi|17540800|ref|NP_502191.1| Delta/Serrate/lag-2  protein family...    42   0.020
gi|31043794|emb|CAD91627.1| Hypothetical protein F15B9.9 [Caenor...    41   0.057
gi|17559704|ref|NP_506250.1| fatty Acid/Retinol binding protein ...    41   0.057
gi|285402|pir||B43963 RNA viral polymerase - Hantavirus >gnl|BL_...    39   0.28
gi|47575840|ref|NP_780744.2| Rho GTPase activating protein 20 [M...    37   1.1
gi|37360354|dbj|BAC98155.1| mKIAA1391 protein [Mus musculus]           37   1.1
gi|10281221|gb|AAG15493.1| glutamate dehydrogenase [Paramecium t...    34   5.4
gi|50287519|ref|XP_446189.1| unnamed protein product [Candida gl...    34   7.0


>gi|17543288|ref|NP_500113.1| putative secreted or extracellular
            protein precursor (40.8 kD) (4C401) [Caenorhabditis
            elegans]
 gi|14574340|gb|AAK68480.1| Hypothetical protein Y41D4B.6
            [Caenorhabditis elegans]
          Length = 372

 Score =  629 bits (1622), Expect = e-179
 Identities = 324/372 (87%), Positives = 324/372 (87%)
 Frame = +1

Query: 1    MTNLHLSLIXXXXXXXXXXXXXXXQIRLKSAYPLDTTVSLSRGNGSAYLKLPIALKANTT 180
            MTNLHLSLI               QIRLKSAYPLDTTVSLSRGNGSAYLKLPIALKANTT
Sbjct: 1    MTNLHLSLILVIFSLSGVFSSGFLQIRLKSAYPLDTTVSLSRGNGSAYLKLPIALKANTT 60

Query: 181  RELGRFPIEMLGNYSLVITGDKVEELGIKSSTYTASFNSTLGTHSPMKLNLPLNGLEIDI 360
            RELGRFPIEMLGNYSLVITGDKVEELGIKSSTYTASFNSTLGTHSPMKLNLPLNGLEIDI
Sbjct: 61   RELGRFPIEMLGNYSLVITGDKVEELGIKSSTYTASFNSTLGTHSPMKLNLPLNGLEIDI 120

Query: 361  ACDKKKISKKEIDRNFEKLQIPKNFRNWKGAKCDVPCQEKCTADTKIDNPLKVDIDYSID 540
            ACDKKKISKKEIDRNFEKLQIPKNFRNWKGAKCDVPCQEKCTADTKIDNPLKVDIDYSID
Sbjct: 121  ACDKKKISKKEIDRNFEKLQIPKNFRNWKGAKCDVPCQEKCTADTKIDNPLKVDIDYSID 180

Query: 541  LSKLPTFVQRLKETTHVDNKIRVPTGTPRQVPXXXXXXXXXXXXXXDALGNSISRLISSL 720
            LSKLPTFVQRLKETTHVDNKIRVPTGTPRQVP              DALGNSISRLISSL
Sbjct: 181  LSKLPTFVQRLKETTHVDNKIRVPTGTPRQVPKEVSKETKSKESNSDALGNSISRLISSL 240

Query: 721  KNFXXXXXXXXXXXXXVTMSRSDSESEKNDEEYLRSQRXXXXXXFSLDDGPSVQRISPID 900
            KNF             VTMSRSDSESEKNDEEYLRSQR      FSLDDGPSVQRISPID
Sbjct: 241  KNFISGGRSSIIPGISVTMSRSDSESEKNDEEYLRSQRPSPPSSFSLDDGPSVQRISPID 300

Query: 901  MSTENFGTERKSQPISFSMDDGPSIPGLPGMFSPFGMLSSMMSRFPRSTTQQKSEFSGIT 1080
            MSTENFGTERKSQPISFSMDDGPSIPGLPGMFSPFGMLSSMMSRFPRSTTQQKSEFSGIT
Sbjct: 301  MSTENFGTERKSQPISFSMDDGPSIPGLPGMFSPFGMLSSMMSRFPRSTTQQKSEFSGIT 360

Query: 1081 AEDIAADGIIKN 1116
            AEDIAADGIIKN
Sbjct: 361  AEDIAADGIIKN 372




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