Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y42G9A_6
(906 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17555856|ref|NP_498333.1| putative nuclear protein, with 2 co... 514 e-144
gi|39586497|emb|CAE73624.1| Hypothetical protein CBG21118 [Caeno... 430 e-119
gi|11527033|gb|AAG36875.1| golgin-80 [Manduca sexta] 35 1.8
gi|23484232|gb|EAA19634.1| Endonuclease/Exonuclease/phosphatase ... 34 3.9
gi|46228558|gb|EAK89428.1| hypothetical protein, potential AT ho... 33 6.7
gi|12836943|dbj|BAB23851.1| unnamed protein product [Mus musculu... 33 8.8
gi|34875049|ref|XP_221083.2| similar to CG1841-PA [Rattus norveg... 33 8.8
>gi|17555856|ref|NP_498333.1| putative nuclear protein, with 2
coiled coil domains (3H243) [Caenorhabditis elegans]
gi|7331868|gb|AAF60556.1| Hypothetical protein Y42G9A.1
[Caenorhabditis elegans]
Length = 301
Score = 514 bits (1324), Expect = e-144
Identities = 264/301 (87%), Positives = 264/301 (87%)
Frame = +1
Query: 1 MDDSQESSFSVSKYETNDDGSMGQFISINECEREIQMLERDIRQQKESSANAKTAITFDQ 180
MDDSQESSFSVSKYETNDDGSMGQFISINECEREIQMLERDIRQQKESSANAKTAITFDQ
Sbjct: 1 MDDSQESSFSVSKYETNDDGSMGQFISINECEREIQMLERDIRQQKESSANAKTAITFDQ 60
Query: 181 LRKIHTLSTLLGPHKELFFDRICRAADIQRASLKNRLKSNINKFEPSTPLSFQPGFDXXX 360
LRKIHTLSTLLGPHKELFFDRICRAADIQRASLKNRLKSNINKFEPSTPLSFQPGFD
Sbjct: 61 LRKIHTLSTLLGPHKELFFDRICRAADIQRASLKNRLKSNINKFEPSTPLSFQPGFDSQS 120
Query: 361 XXXXXXXXXNFVVTPTTLSSLLNNHTRKNHIEMLAPLASEEELMRFPAERQFDLMQIGFS 540
NFVVTPTTLSSLLNNHTRKNHIEMLAPLASEEELMRFPAERQFDLMQIGFS
Sbjct: 121 SLSTTSESQNFVVTPTTLSSLLNNHTRKNHIEMLAPLASEEELMRFPAERQFDLMQIGFS 180
Query: 541 YDEVKQLLEMFEKFKNDVQEINRLHTLTQILNQFCNYISMYAPPNLKMISSAFNLLELGN 720
YDEVKQLLEMFEKFKNDVQEINRLHTLTQILNQFCNYISMYAPPNLKMISSAFNLLELGN
Sbjct: 181 YDEVKQLLEMFEKFKNDVQEINRLHTLTQILNQFCNYISMYAPPNLKMISSAFNLLELGN 240
Query: 721 SAHEVKRVLLKAXXXXXXXXXDVXXXXXXXXXXXXXXXXNRDDLLLGLDRSPPSDDGTQK 900
SAHEVKRVLLKA DV NRDDLLLGLDRSPPSDDGTQK
Sbjct: 241 SAHEVKRVLLKARRREESEESDVSFSKKPRPSSRSPASPNRDDLLLGLDRSPPSDDGTQK 300
Query: 901 V 903
V
Sbjct: 301 V 301