Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y43B11AL_3
         (1320 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17543374|ref|NP_501099.1| cyclin-like F-box family member (4H...   867   0.0
gi|39593501|emb|CAE61793.1| Hypothetical protein CBG05756 [Caeno...   254   3e-66
gi|17553776|ref|NP_498994.1| cyclin-like F-box family member (3K...   127   8e-28
gi|32565585|ref|NP_498995.2| cyclin-like F-box family member (3K...   125   2e-27
gi|345351|pir||S31129 hypothetical protein F59B2.9 - Caenorhabdi...   114   5e-24
gi|39585063|emb|CAE62714.1| Hypothetical protein CBG06869 [Caeno...    96   1e-18
gi|39585064|emb|CAE62715.1| Hypothetical protein CBG06870 [Caeno...    87   9e-16
gi|17558866|ref|NP_504399.1| cyclin-like F-box family member (5F...    76   2e-12
gi|32564986|ref|NP_498482.2| cyclin-like F-box family member (3H...    68   4e-10
gi|7506328|pir||T16695 hypothetical protein R05H11.1 - Caenorhab...    68   6e-10
gi|17536535|ref|NP_493753.1| putative protein family member (2A8...    64   8e-09
gi|38176053|gb|AAB71043.2| Hypothetical protein T27A1.2 [Caenorh...    64   8e-09
gi|17510619|ref|NP_490869.1| predicted CDS, putative cytoplasmic...    62   2e-08
gi|17552704|ref|NP_497698.1| cyclin-like F-box family member (3E...    61   5e-08
gi|39593998|emb|CAE70108.1| Hypothetical protein CBG16556 [Caeno...    61   7e-08
gi|17508893|ref|NP_492562.1| putative protein family member (1K2...    60   2e-07
gi|39582548|emb|CAE63867.1| Hypothetical protein CBG08432 [Caeno...    60   2e-07
gi|39595167|emb|CAE60204.1| Hypothetical protein CBG03766 [Caeno...    59   2e-07
gi|39590650|emb|CAE65020.1| Hypothetical protein CBG09858 [Caeno...    59   3e-07
gi|39590887|emb|CAE65261.1| Hypothetical protein CBG10152 [Caeno...    57   1e-06
gi|17570373|ref|NP_508368.1| putative mitochondrial protein fami...    55   3e-06
gi|17535961|ref|NP_493775.1| cyclin-like F-box family member (2A...    54   6e-06
gi|39595157|emb|CAE60194.1| Hypothetical protein CBG03754 [Caeno...    54   6e-06
gi|17560006|ref|NP_507748.1| cyclin-like F-box family member (5T...    54   1e-05
gi|17532035|ref|NP_493736.1| cyclin-like F-box family member (2A...    53   2e-05
gi|17558298|ref|NP_505764.1| predicted CDS, putative cytoplasmic...    52   2e-05
gi|17543454|ref|NP_502619.1| predicted CDS, putative cytoplasmic...    52   2e-05
gi|49035165|gb|AAK68353.2| Hypothetical protein F29G9.7 [Caenorh...    52   3e-05
gi|17560370|ref|NP_504562.1| predicted CDS, putative cytoplasmic...    52   3e-05
gi|17564208|ref|NP_507027.1| cyclin-like F-box family member (5Q...    50   1e-04
gi|17532051|ref|NP_493732.1| putative cytoplasmic protein family...    49   2e-04
gi|39583301|emb|CAE60093.1| Hypothetical protein CBG03617 [Caeno...    49   2e-04
gi|32699231|gb|AAB71205.2| Hypothetical protein C24H12.9 [Caenor...    49   2e-04
gi|39584449|emb|CAE72587.1| Hypothetical protein CBG19776 [Caeno...    49   3e-04
gi|17535945|ref|NP_493792.1| cyclin-like F-box family member (2A...    49   3e-04
gi|17536797|ref|NP_493765.1| predicted CDS, putative protein fam...    49   3e-04
gi|17539908|ref|NP_500594.1| putative cytoplasmic protein family...    48   5e-04
gi|17564210|ref|NP_507029.1| putative protein family member (5Q5...    48   6e-04
gi|17507471|ref|NP_492847.1| putative cytoplasmic protein family...    47   8e-04
gi|17508809|ref|NP_493003.1| cyclin-like F-box family member (1M...    47   0.001
gi|17555720|ref|NP_499353.1| cyclin-like F-box family member (3L...    47   0.001
gi|39583805|emb|CAE74878.1| Hypothetical protein CBG22737 [Caeno...    46   0.002
gi|39583279|emb|CAE60071.1| Hypothetical protein CBG03589 [Caeno...    46   0.002
gi|17507475|ref|NP_492845.1| predicted CDS, peptidase family A16...    45   0.004
gi|39581912|emb|CAE72874.1| Hypothetical protein CBG20177 [Caeno...    45   0.004
gi|39581284|emb|CAE60030.1| Hypothetical protein CBG03537 [Caeno...    45   0.005
gi|25395375|pir||G88021 protein W10D9.2 [imported] - Caenorhabdi...    45   0.005
gi|39596326|emb|CAE69964.1| Hypothetical protein CBG16359 [Caeno...    44   0.007
gi|17532055|ref|NP_493734.1| predicted CDS, cyclin-like F-box fa...    43   0.015
gi|32565425|ref|NP_871891.1| cyclin-like F-box family member (1K...    42   0.033
gi|39581283|emb|CAE60029.1| Hypothetical protein CBG03535 [Caeno...    41   0.073
gi|39589447|emb|CAE74476.1| Hypothetical protein CBG22224 [Caeno...    40   0.095
gi|38176057|gb|AAB71056.3| Hypothetical protein W10D9.2 [Caenorh...    40   0.12
gi|17540294|ref|NP_502240.1| cyclin-like F-box family member (4M...    40   0.12
gi|17536835|ref|NP_493737.1| cyclin-like F-box family member (2A...    40   0.12
gi|17564566|ref|NP_506441.1| cyclin-like F-box family member (5O...    40   0.16
gi|17569785|ref|NP_508225.1| predicted CDS, putative protein fam...    40   0.16
gi|7508239|pir||T25124 hypothetical protein T22G5.3 - Caenorhabd...    40   0.16
gi|7507212|pir||T24545 hypothetical protein T05F1.11 - Caenorhab...    40   0.16
gi|32698452|emb|CAB60388.2| Hypothetical protein Y47H10A.2 [Caen...    39   0.21
gi|17559384|ref|NP_504434.1| cyclin-like F-box family member (5F...    39   0.21
gi|17510081|ref|NP_493053.1| cyclin-like F-box family member (1M...    39   0.21
gi|17536833|ref|NP_493738.1| predicted CDS, putative endoplasmic...    39   0.21
gi|17555102|ref|NP_497154.1| cyclin-like F-box family member (3A...    39   0.21
gi|17564212|ref|NP_507030.1| cyclin-like F-box family member, po...    39   0.21
gi|17541590|ref|NP_501431.1| cyclin-like F-box family member (4J...    39   0.21
gi|17558542|ref|NP_507446.1| cyclin-like F-box family member (5S...    39   0.28
gi|17553632|ref|NP_498736.1| predicted CDS, cyclin-like F-box fa...    39   0.28
gi|7500177|pir||T31804 hypothetical protein F29G9.7 - Caenorhabd...    39   0.36
gi|17553654|ref|NP_499733.1| cyclin-like F-box family member (35...    39   0.36
gi|39580965|emb|CAE72935.1| Hypothetical protein CBG20260 [Caeno...    38   0.61
gi|39583582|emb|CAE65686.1| Hypothetical protein CBG10761 [Caeno...    38   0.61
gi|17532981|ref|NP_494359.1| cyclin-like F-box family member (2D...    38   0.61
gi|17543002|ref|NP_500634.1| cyclin-like F-box family member (4F...    36   1.8
gi|17555108|ref|NP_497157.1| very Early Transcript VET-3, cyclin...    36   2.3
gi|7500438|pir||T32345 hypothetical protein F34D6.1 - Caenorhabd...    35   3.0
gi|17533665|ref|NP_494331.1| cyclin-like F-box (2C970) [Caenorha...    35   3.0
gi|7498363|pir||T32607 hypothetical protein E04A4.1 - Caenorhabd...    35   3.0
gi|17542776|ref|NP_500471.1| predicted CDS, putative protein (4E...    35   3.0
gi|32566327|ref|NP_500625.2| predicted CDS, cyclin-like F-box fa...    35   3.0
gi|17532979|ref|NP_494358.1| predicted CDS, cyclin-like F-box fa...    35   4.0
gi|39586577|emb|CAE73704.1| Hypothetical protein CBG21217 [Caeno...    35   4.0
gi|17510891|ref|NP_492734.1| cyclin-like F-box family member (1L...    35   4.0
gi|17508165|ref|NP_492933.1| cyclin-like F-box (1M75) [Caenorhab...    35   4.0
gi|17541606|ref|NP_502237.1| cyclin-like F-box family member (4M...    35   5.2
gi|38047963|gb|AAR09884.1| similar to Drosophila melanogaster Ba...    34   6.8
gi|17555104|ref|NP_497155.1| cyclin-like F-box family member (3A...    34   6.8
gi|39582523|emb|CAE65610.1| Hypothetical protein CBG10639 [Caeno...    34   8.9
gi|48824367|ref|ZP_00285751.1| COG2972: Predicted signal transdu...    34   8.9
gi|46488413|gb|AAS99528.1| aspartic protease PM5 [Plasmodium viv...    34   8.9
gi|46488451|gb|AAS99547.1| aspartic protease PM5 [Plasmodium viv...    34   8.9
gi|3378134|gb|AAC28455.1| brahma associated protein 60 kDa [Dros...    34   8.9
gi|9631420|ref|NP_048328.1| ORF MSV257 leucine rich repeat gene ...    34   8.9


>gi|17543374|ref|NP_501099.1| cyclin-like F-box family member (4H831)
            [Caenorhabditis elegans]
 gi|14574347|gb|AAK68484.1| Hypothetical protein Y43B11AL.1
            [Caenorhabditis elegans]
          Length = 439

 Score =  867 bits (2239), Expect = 0.0
 Identities = 426/439 (97%), Positives = 426/439 (97%)
 Frame = +1

Query: 1    MSTPFHLLKLPLVAQQEVFKKFEIVDIVEISFTSTRVRDTLRSTRLRAVEHHVKFSHDYP 180
            MSTPFHLLKLPLVAQQEVFKKFEIVDIVEISFTSTRVRDTLRSTRLRAVEHHVKFSHDYP
Sbjct: 1    MSTPFHLLKLPLVAQQEVFKKFEIVDIVEISFTSTRVRDTLRSTRLRAVEHHVKFSHDYP 60

Query: 181  YITTKSKNDGECCLRLVFLPFPLSIQNRPDMKIGCHQFGKCFVPDDTILCTHHNVEFAAS 360
            YITTKSKNDGECCLRLVFLPFPLSIQNRPDMKIGCHQFGKCFVPDDTILCTHHNVEFAAS
Sbjct: 61   YITTKSKNDGECCLRLVFLPFPLSIQNRPDMKIGCHQFGKCFVPDDTILCTHHNVEFAAS 120

Query: 361  ILFDYIFAIFPGPVDLKLSVCNIRNLSSLLLNKNFTNCQKLEVHETAETEVCPLDLXXXX 540
            ILFDYIFAIFPGPVDLKLSVCNIRNLSSLLLNKNFTNCQKLEVHETAETEVCPLDL
Sbjct: 121  ILFDYIFAIFPGPVDLKLSVCNIRNLSSLLLNKNFTNCQKLEVHETAETEVCPLDLEEIV 180

Query: 541  XXXXXXXXXNIYTTQCETVRIEQIFNLETVILHNAQWITLPDLLSLNCRFGSFRKFNINQ 720
                     NIYTTQCETVRIEQIFNLETVILHNAQWITLPDLLSLNCRFGSFRKFNINQ
Sbjct: 181  KEVRVEKEINIYTTQCETVRIEQIFNLETVILHNAQWITLPDLLSLNCRFGSFRKFNINQ 240

Query: 721  NLLEAFSKNWLNSKSRTLEFMKFGFPEHGVSFQWNKSELPLKPWNPQIRSRYYYLKKDLS 900
            NLLEAFSKNWLNSKSRTLEFMKFGFPEHGVSFQWNKSELPLKPWNPQIRSRYYYLKKDLS
Sbjct: 241  NLLEAFSKNWLNSKSRTLEFMKFGFPEHGVSFQWNKSELPLKPWNPQIRSRYYYLKKDLS 300

Query: 901  LAGIEKSFGSNYIDCSEGLDIIRSDGLTATILIQDNFDKNILFLVWRDPHPENSRITELK 1080
            LAGIEKSFGSNYIDCSEGLDIIRSDGLTATILIQDNFDKNILFLVWRDPHPENSRITELK
Sbjct: 301  LAGIEKSFGSNYIDCSEGLDIIRSDGLTATILIQDNFDKNILFLVWRDPHPENSRITELK 360

Query: 1081 EQILVEIDAYTEAKTQQTNPYFTHISDSFMNDTESTEYDLFGIDMFLKLSPKDVIYEKVE 1260
            EQILVEIDAYTEAKTQQTNPYFTHISDSFMNDTESTEYDLFGIDMFLKLSPKDVIYEKVE
Sbjct: 361  EQILVEIDAYTEAKTQQTNPYFTHISDSFMNDTESTEYDLFGIDMFLKLSPKDVIYEKVE 420

Query: 1261 KVFRLKKEIKMLREQKFDV 1317
            KVFRLKKEIKMLREQKFDV
Sbjct: 421  KVFRLKKEIKMLREQKFDV 439




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