Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y43F8C_6
         (738 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17565682|ref|NP_507805.1| putative protein family member (5U1...   442   e-123
gi|17556126|ref|NP_497692.1| putative protein family member, wit...   102   1e-20
gi|17553910|ref|NP_497629.1| putative secreted or extracellular ...    89   7e-17
gi|17565690|ref|NP_507809.1| putative secreted or extracellular ...    45   0.002
gi|17556120|ref|NP_497679.1| predicted CDS, putative endoplasmic...    44   0.003
gi|17552850|ref|NP_497562.1| predicted CDS, putative protein fam...    39   0.11
gi|7498319|pir||T33602 hypothetical protein E02H9.2 - Caenorhabd...    39   0.11
gi|23508624|ref|NP_701293.1| hypothetical protein [Plasmodium fa...    37   0.32
gi|23508289|ref|NP_700958.1| hypothetical protein [Plasmodium fa...    37   0.32
gi|50427341|ref|XP_462283.1| unnamed protein product [Debaryomyc...    36   0.72
gi|20840158|ref|XP_141283.1| similar to hypothetical protein [Mu...    36   0.72
gi|26333971|dbj|BAC30703.1| unnamed protein product [Mus musculus]     36   0.72
gi|3450826|gb|AAC32596.1| serum opacity factor [Streptococcus py...    35   1.2
gi|23508545|ref|NP_701214.1| hypothetical protein [Plasmodium fa...    35   1.6
gi|39587280|emb|CAE74934.1| Hypothetical protein CBG22821 [Caeno...    35   1.6
gi|23480033|gb|EAA16704.1| hypothetical protein [Plasmodium yoel...    35   1.6
gi|46437993|gb|EAK97331.1| hypothetical protein CaO19.5258 [Cand...    35   2.1
gi|16081072|ref|NP_391900.1| yydD [Bacillus subtilis subsp. subt...    33   4.7
gi|50285547|ref|XP_445202.1| unnamed protein product [Candida gl...    33   4.7
gi|23479204|gb|EAA16096.1| Plasmodium falciparum CDPK2 protein-r...    33   4.7
gi|21228740|ref|NP_634662.1| hypothetical protein MM2638 [Methan...    33   6.1
gi|4502115|ref|NP_001628.1| acyloxyacyl hydrolase precursor [Hom...    33   8.0
gi|42538984|ref|NP_973718.1| L-NAME induced actin cytoskeletal p...    33   8.0
gi|49477044|ref|YP_035243.1| probable S-layer protein [Bacillus ...    33   8.0
gi|17552860|ref|NP_497557.1| putative secreted or extracellular ...    33   8.0
gi|45914834|ref|ZP_00193324.2| COG4571: Outer membrane protease ...    33   8.0
gi|23508760|ref|NP_701428.1| hypothetical protein [Plasmodium fa...    33   8.0
gi|15617174|ref|NP_240387.1| hypothetical protein BU584 [Buchner...    33   8.0


>gi|17565682|ref|NP_507805.1| putative protein family member (5U106)
           [Caenorhabditis elegans]
 gi|7509828|pir||T26868 hypothetical protein Y43F8C.5 -
           Caenorhabditis elegans
 gi|3979956|emb|CAA21609.1| Hypothetical protein Y43F8C.5
           [Caenorhabditis elegans]
          Length = 245

 Score =  442 bits (1138), Expect = e-123
 Identities = 212/234 (90%), Positives = 212/234 (90%)
 Frame = -1

Query: 705 ALQHATAVDTTIEQTTPKPKWKMLQEQFDKEVEQHFLRLNDYRREVAKMMNWSSMNELKY 526
           ALQHATAVDTTIEQTTPKPKWKMLQEQFDKEVEQHFLRLNDYRREVAKMMNWSSMNELKY
Sbjct: 12  ALQHATAVDTTIEQTTPKPKWKMLQEQFDKEVEQHFLRLNDYRREVAKMMNWSSMNELKY 71

Query: 525 GDFNVSDGSNSFYYSTTNSFKEVVNNLIYWANNIVDDLKENKTICEDDEDCFGAYIINPM 346
           GDFNVSDGSNSFYYSTTNSFKEVVNNLIYWANNIVDDLKENKTICEDDEDCFGAYIINPM
Sbjct: 72  GDFNVSDGSNSFYYSTTNSFKEVVNNLIYWANNIVDDLKENKTICEDDEDCFGAYIINPM 131

Query: 345 YKSFKSSLHCGASELEPSSCDEPNAWCYFYPRSNVTWKATDQQIGEPGFACDADRYNKNG 166
           YKSFKSSLHCGASELEPSSCDEPNAWCYFYPRSNVTWKATDQQIGEPGFACDADRYNKNG
Sbjct: 132 YKSFKSSLHCGASELEPSSCDEPNAWCYFYPRSNVTWKATDQQIGEPGFACDADRYNKNG 191

Query: 165 LCSLDXXXXXXXXXXXXXXXXXXXXXXPKSSDSSANINILVFCIVSITTYLWSY 4
           LCSLD                      PKSSDSSANINILVFCIVSITTYLWSY
Sbjct: 192 LCSLDPPTTTTTTTTTTTVKPPPPTTTPKSSDSSANINILVFCIVSITTYLWSY 245




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