Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y47G6A_4
(3561 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508447|ref|NP_491163.1| MutS Homolog (133.6 kD) (msh-6) [Ca... 2165 0.0
gi|39598285|emb|CAE68977.1| Hypothetical protein CBG14959 [Caeno... 1803 0.0
gi|15625580|gb|AAL04170.1| mismatch repair protein Msh6 [Danio r... 680 0.0
gi|33504503|ref|NP_878280.1| mutS homolog 6 [Danio rerio] >gnl|B... 678 0.0
gi|6754744|ref|NP_034960.1| mutS homolog 6 [Mus musculus] >gnl|B... 676 0.0
gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus] 676 0.0
gi|2506881|sp|P54276|MSH6_MOUSE DNA mismatch repair protein MSH6... 671 0.0
gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens] 659 0.0
gi|1709123|sp|P52701|MSH6_HUMAN DNA mismatch repair protein MSH6... 659 0.0
gi|4504191|ref|NP_000170.1| mutS homolog 6; G/T mismatch-binding... 659 0.0
gi|7512474|pir||JC5839 GTBP-N protein - human >gnl|BL_ORD_ID|211... 659 0.0
gi|34862150|ref|XP_345634.1| similar to mismatch repair protein ... 647 0.0
gi|24664545|ref|NP_648755.1| CG7003-PA [Drosophila melanogaster]... 610 e-172
gi|31207841|ref|XP_312887.1| ENSANGP00000014707 [Anopheles gambi... 606 e-171
gi|48095711|ref|XP_392346.1| similar to Probable DNA mismatch re... 592 e-167
gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon n... 587 e-166
gi|15235223|ref|NP_192116.1| DNA mismatch repair protein MSH6-1 ... 514 e-144
gi|49615726|gb|AAT67045.1| DNA mismatch repair protein [Petunia ... 504 e-141
gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana] 503 e-140
gi|50739008|ref|XP_419359.1| PREDICTED: similar to GTBP-N [Gallu... 487 e-136
gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gib... 453 e-125
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Cand... 439 e-121
gi|19075844|ref|NP_588344.1| mutS family DNA mismatch repair pro... 436 e-120
gi|32416726|ref|XP_328841.1| hypothetical protein [Neurospora cr... 436 e-120
gi|38102177|gb|EAA49046.1| hypothetical protein MG00704.4 [Magna... 435 e-120
gi|50306061|ref|XP_452992.1| unnamed protein product [Kluyveromy... 429 e-118
gi|49087928|ref|XP_405845.1| hypothetical protein AN1708.2 [Aspe... 426 e-117
gi|50288573|ref|XP_446716.1| unnamed protein product [Candida gl... 424 e-117
gi|50422829|ref|XP_459992.1| unnamed protein product [Debaryomyc... 422 e-116
gi|50557004|ref|XP_505910.1| hypothetical protein [Yarrowia lipo... 420 e-115
gi|23490759|gb|EAA22456.1| G/T mismatch binding protein-related ... 419 e-115
gi|6320302|ref|NP_010382.1| Protein required for mismatch repair... 416 e-114
gi|1588283|prf||2208298A MSH6 gene 414 e-114
gi|45201212|ref|NP_986782.1| AGR116Wp [Eremothecium gossypii] >g... 414 e-113
gi|2662381|dbj|BAA23675.1| GTBP-ALT [Homo sapiens] >gnl|BL_ORD_I... 410 e-112
gi|50255340|gb|EAL18075.1| hypothetical protein CNBK0960 [Crypto... 406 e-111
gi|49073526|ref|XP_400975.1| hypothetical protein UM03360.1 [Ust... 374 e-101
gi|23613078|ref|NP_703400.1| DNA repair protein, putative [Plasm... 337 2e-90
gi|12846234|dbj|BAB27085.1| unnamed protein product [Mus musculus] 324 1e-86
gi|7012942|gb|AAF35250.1| mismatch binding protein Mus3 [Zea mays] 322 3e-86
gi|32416686|ref|XP_328821.1| hypothetical protein [Neurospora cr... 262 4e-68
gi|20807804|ref|NP_622975.1| MutS-like ATPases involved in misma... 261 8e-68
gi|46125469|ref|XP_387288.1| hypothetical protein FG07112.1 [Gib... 252 4e-65
gi|21674323|ref|NP_662388.1| DNA mismatch repair protein MutS [C... 252 5e-65
gi|38109663|gb|EAA55499.1| hypothetical protein MG09306.4 [Magna... 250 2e-64
gi|19074680|ref|NP_586186.1| DNA MISMATCH REPAIR PROTEIN OF THE ... 250 2e-64
gi|50761967|ref|XP_424897.1| PREDICTED: similar to mutS homolog ... 243 2e-62
gi|20089412|ref|NP_615487.1| DNA mismatch repair protein [Methan... 243 3e-62
gi|48840303|ref|ZP_00297230.1| COG0249: Mismatch repair ATPase (... 241 9e-62
gi|15644466|ref|NP_229518.1| DNA mismatch repair protein [Thermo... 240 2e-61
gi|49092850|ref|XP_407886.1| hypothetical protein AN3749.2 [Aspe... 239 3e-61
gi|46312102|ref|ZP_00212701.1| COG0249: Mismatch repair ATPase (... 238 8e-61
gi|30089006|gb|AAP13535.1| mutS homolog 3 (E. coli) [Homo sapiens] 237 2e-60
gi|4505249|ref|NP_002430.1| mutS homolog 3; mutS (E. coli) homol... 237 2e-60
gi|21227785|ref|NP_633707.1| DNA mismatch repair protein [Methan... 236 2e-60
gi|48787755|ref|ZP_00283734.1| COG0249: Mismatch repair ATPase (... 236 4e-60
gi|118951|sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 ... 236 4e-60
gi|32421125|ref|XP_331006.1| DNA MISMATCH REPAIR PROTEIN MSH2 [N... 235 5e-60
gi|38102376|gb|EAA49221.1| hypothetical protein MG00879.4 [Magna... 235 6e-60
gi|1619909|gb|AAB16999.1| DNA mismatch repair protein [Thermotog... 234 8e-60
gi|15675890|ref|NP_270064.1| putative DNA mismatch repair protei... 234 8e-60
gi|387849|gb|AAB60711.1| MutS homologue; major mRNA product cont... 233 2e-59
gi|46324220|ref|ZP_00224581.1| COG0249: Mismatch repair ATPase (... 233 2e-59
gi|18310137|ref|NP_562071.1| DNA mismatch repair protein [Clostr... 233 3e-59
gi|21911342|ref|NP_665610.1| putative DNA mismatch repair protei... 232 4e-59
gi|34481396|emb|CAC79990.1| sperm protein [Homo sapiens] 232 5e-59
gi|400971|sp|P13705|MSH3_MOUSE DNA MISMATCH REPAIR PROTEIN MSH3 ... 232 5e-59
gi|50290307|ref|XP_447585.1| unnamed protein product [Candida gl... 231 1e-58
gi|6324482|ref|NP_014551.1| Protein that forms heterodimers, wit... 230 2e-58
gi|34499116|ref|NP_903331.1| DNA mismatch repair protein [Chromo... 230 2e-58
gi|172002|gb|AAA34802.1| homologue of bacterial MutS protein 230 2e-58
gi|30686920|ref|NP_194284.2| DNA mismatch repair protein MSH3 (M... 229 3e-58
gi|48857810|ref|ZP_00311790.1| COG0249: Mismatch repair ATPase (... 229 4e-58
gi|19746989|ref|NP_608125.1| putative DNA mismatch repair protei... 229 4e-58
gi|1083296|pir||JC4019 DNA mismatch repair protein rep-3 - mouse 228 6e-58
gi|50259027|gb|EAL21706.1| hypothetical protein CNBC5700 [Crypto... 228 6e-58
gi|22538235|ref|NP_689086.1| DNA mismatch repair protein HexA [S... 228 1e-57
gi|15614932|ref|NP_243235.1| DNA mismatch repair protein (mismat... 226 3e-57
gi|19114864|ref|NP_593952.1| mating-type switching protein swi4 ... 225 5e-57
gi|24380425|ref|NP_722380.1| DNA mismatch repair protein [Strept... 225 5e-57
gi|34539964|ref|NP_904443.1| DNA mismatch repair protein MutS [P... 224 1e-56
gi|15892324|ref|NP_360038.1| DNA mismatch repair protein MutS [R... 224 1e-56
gi|46123905|ref|XP_386506.1| MSH2_NEUCR DNA mismatch repair prot... 223 3e-56
gi|42528103|ref|NP_973201.1| DNA mismatch repair protein MutS [T... 222 6e-56
gi|50260303|gb|EAL22962.1| hypothetical protein CNBA7300 [Crypto... 221 7e-56
gi|15595142|ref|NP_212931.1| DNA mismatch repair protein (mutS) ... 221 1e-55
gi|135075|sp|P26359|SWI4_SCHPO Mating-type switching protein swi... 221 1e-55
gi|34580662|ref|ZP_00142142.1| DNA mismatch repair protein MutS ... 221 1e-55
gi|50286559|ref|XP_445708.1| unnamed protein product [Candida gl... 220 2e-55
gi|20152859|gb|AAM13399.1| MutS homolog 7 [Triticum aestivum] 219 5e-55
gi|29377617|ref|NP_816771.1| DNA mismatch repair protein HexA [E... 218 8e-55
gi|50416203|ref|XP_457536.1| unnamed protein product [Debaryomyc... 218 8e-55
gi|4775578|emb|CAB42555.1| MUS2 protein [Zea mays] 217 1e-54
gi|4775580|emb|CAB42556.1| MUS2 protein [Zea mays] 217 1e-54
gi|49095364|ref|XP_409143.1| hypothetical protein AN5006.2 [Aspe... 217 2e-54
gi|15834794|ref|NP_296553.1| DNA mismatch repair protein MutS [C... 217 2e-54
gi|49075682|ref|XP_401890.1| hypothetical protein UM04275.1 [Ust... 216 4e-54
gi|33241254|ref|NP_876196.1| Mismatch repair ATPase [Prochloroco... 216 4e-54
gi|42523431|ref|NP_968811.1| DNA mismatch repair protein [Bdello... 215 5e-54
gi|15604167|ref|NP_220682.1| DNA MISMATCH REPAIR PROTEIN MUTS (m... 215 5e-54
gi|16078767|ref|NP_389586.1| mutS [Bacillus subtilis subsp. subt... 214 9e-54
gi|1002520|gb|AAB19235.1| MutS 212 5e-53
gi|23509476|ref|NP_702143.1| DNA mismatch repair protein Msh2p, ... 212 6e-53
gi|49072702|ref|XP_400640.1| hypothetical protein UM03025.1 [Ust... 212 6e-53
gi|17545870|ref|NP_519272.1| PROBABLE DNA MISMATCH REPAIR PROTEI... 211 8e-53
gi|15618850|ref|NP_225136.1| DNA Mismatch Repair [Chlamydophila ... 211 8e-53
gi|15836474|ref|NP_300998.1| DNA mismatch repair [Chlamydophila ... 211 8e-53
gi|28899326|ref|NP_798931.1| DNA mismatch repair protein MutS [V... 211 8e-53
gi|28210987|ref|NP_781931.1| DNA mismatch repair protein mutS [C... 211 8e-53
gi|46436018|gb|EAK95388.1| hypothetical protein CaO19.3608 [Cand... 211 1e-52
gi|28850334|gb|AAO53119.1| similar to Homo sapiens (Human). DNA ... 211 1e-52
gi|34906192|ref|NP_914443.1| putative DNA mismatch repair gene [... 211 1e-52
gi|47095354|ref|ZP_00232964.1| DNA mismatch repair protein MutS ... 210 2e-52
gi|50739005|ref|XP_419358.1| PREDICTED: similar to DNA mismatch ... 210 2e-52
gi|49474920|ref|YP_032961.1| DNA mismatch repair protein mutS [B... 210 2e-52
gi|29348530|ref|NP_812033.1| DNA mismatch repair protein mutS [B... 210 2e-52
gi|28574182|ref|NP_788058.1| CG4215-PB [Drosophila melanogaster]... 210 2e-52
gi|34330121|dbj|BAC82442.1| hypothetical protein [Gallus gallus] 210 2e-52
gi|24584320|ref|NP_523565.2| CG4215-PA [Drosophila melanogaster]... 210 2e-52
gi|46141457|ref|ZP_00146715.2| COG0249: Mismatch repair ATPase (... 209 3e-52
gi|47550851|ref|NP_999943.1| mismatch repair protein Msh2 [Danio... 209 4e-52
gi|45199121|ref|NP_986150.1| AFR603Cp [Eremothecium gossypii] >g... 209 5e-52
gi|15895112|ref|NP_348461.1| Mismatch repair protein MutS, ATPas... 209 5e-52
gi|27467892|ref|NP_764529.1| DNA mismatch repair protein [Staphy... 209 5e-52
gi|1079288|pir||S53609 DNA mismatch repair protein MSH2 - Africa... 208 7e-52
gi|23002388|ref|ZP_00046065.1| COG0249: Mismatch repair ATPase (... 208 7e-52
gi|47087243|ref|NP_998689.1| zgc:55333 [Danio rerio] >gnl|BL_ORD... 208 8e-52
gi|15603695|ref|NP_246769.1| MutS [Pasteurella multocida Pm70] >... 208 8e-52
gi|675456|gb|AAA62406.1| Spellchecker1 [Drosophila melanogaster] 208 8e-52
gi|50875729|emb|CAG35569.1| probable DNA mismatch repair protein... 208 8e-52
gi|26988358|ref|NP_743783.1| DNA mismatch repair protein MutS [P... 208 8e-52
gi|6224917|gb|AAF06013.1| MutS homolog 7 [Arabidopsis thaliana] 208 8e-52
gi|30687514|ref|NP_850630.1| DNA mismatch repair protein MSH6-2 ... 208 8e-52
gi|29654365|ref|NP_820057.1| DNA mismatch repair protein MutS [C... 207 1e-51
gi|50250471|emb|CAH03856.1| DNA mismatch repair protein MutS [Ps... 207 1e-51
gi|46907631|ref|YP_014020.1| DNA mismatch repair protein MutS [L... 207 2e-51
gi|123080|sp|P10564|HEXA_STRPN DNA mismatch repair protein hexA ... 207 2e-51
gi|31236793|ref|XP_319476.1| ENSANGP00000014300 [Anopheles gambi... 207 2e-51
gi|15903929|ref|NP_359479.1| DNA mismatch repair protein HexA [S... 207 2e-51
gi|48861267|ref|ZP_00315170.1| COG0249: Mismatch repair ATPase (... 207 2e-51
gi|1079805|gb|AAA82080.1| similar to S. cerevisiae Msh2p (Swiss-... 206 2e-51
gi|4557761|ref|NP_000242.1| mutS homolog 2; mutS (E. coli) homol... 206 2e-51
gi|16803443|ref|NP_464928.1| DNA mismatch repair (recognition) [... 206 3e-51
gi|46155973|ref|ZP_00133579.2| COG0249: Mismatch repair ATPase (... 206 4e-51
gi|25407596|pir||B85295 probable DNA mismatch repair protein [im... 206 4e-51
gi|42518561|ref|NP_964491.1| DNA mismatch repair protein MutS [L... 206 4e-51
gi|46914609|emb|CAG21386.1| putative DNA mismatch repair protein... 205 6e-51
gi|48732754|ref|ZP_00266497.1| COG0249: Mismatch repair ATPase (... 205 6e-51
gi|49473773|ref|YP_031815.1| DNA mismatch repair protein mutS [B... 205 6e-51
gi|448278|prf||1916402A mismatch repair protein 204 1e-50
gi|6319935|ref|NP_010016.1| Mismatch repair protein, forms dimer... 204 1e-50
gi|21401750|ref|NP_657735.1| MutS_N, MutS family, N-terminal put... 204 2e-50
gi|42782853|ref|NP_980100.1| DNA mismatch repair protein MutS [B... 204 2e-50
gi|47568274|ref|ZP_00238977.1| DNA mismatch repair protein MutS ... 204 2e-50
gi|49478366|ref|YP_037830.1| DNA mismatch repair protein [Bacill... 204 2e-50
gi|48770731|ref|ZP_00275074.1| COG0249: Mismatch repair ATPase (... 204 2e-50
gi|48853484|ref|ZP_00307654.1| COG0249: Mismatch repair ATPase (... 204 2e-50
gi|16800508|ref|NP_470776.1| DNA mismatch repair (recognition) [... 203 2e-50
gi|30021861|ref|NP_833492.1| DNA mismatch repair protein mutS [B... 203 2e-50
gi|39996921|ref|NP_952872.1| DNA mismatch repair protein MutS [G... 203 2e-50
gi|23023444|ref|ZP_00062680.1| COG0249: Mismatch repair ATPase (... 203 3e-50
gi|23467513|ref|ZP_00123094.1| COG0249: Mismatch repair ATPase (... 203 3e-50
gi|13591999|ref|NP_112320.1| mismatch repair protein 2 [Rattus n... 202 6e-50
gi|28871201|ref|NP_793820.1| DNA mismatch repair protein MutS [P... 201 1e-49
gi|49615728|gb|AAT67046.1| DNA mismatch repair protein [Petunia ... 201 1e-49
gi|7487958|pir||T05793 msh3 protein homolog M7J2.90 - Arabidopsi... 201 1e-49
gi|23105060|ref|ZP_00091518.1| COG0249: Mismatch repair ATPase (... 201 1e-49
gi|48107179|ref|XP_396178.1| similar to hypothetical protein [Ap... 200 2e-49
gi|32171452|sp|Q8DC53|MUTS_VIBVU DNA mismatch repair protein mutS 200 2e-49
gi|27364957|ref|NP_760485.1| Mismatch repair ATPase [Vibrio vuln... 200 2e-49
gi|15640557|ref|NP_230186.1| DNA mismatch repair protein MutS [V... 199 3e-49
gi|37930232|gb|AAP76283.1| MutS [Pseudomonas sp. PCL1171] 199 4e-49
gi|45188042|ref|NP_984265.1| ADR168Cp [Eremothecium gossypii] >g... 199 5e-49
gi|15793265|ref|NP_283087.1| DNA mismatch repair protein [Neisse... 199 5e-49
gi|50250468|emb|CAH03854.1| DNA mismatch repair protein MutS [Ps... 198 7e-49
gi|15598816|ref|NP_252310.1| DNA mismatch repair protein MutS [P... 198 7e-49
gi|46437024|gb|EAK96377.1| hypothetical protein CaO19.3093 [Cand... 198 7e-49
gi|46164334|ref|ZP_00137010.2| COG0249: Mismatch repair ATPase (... 198 7e-49
gi|726086|gb|AAA75027.1| MutS homolog 2 198 9e-49
gi|44888160|sp|Q7MHR2|MUTS_VIBVY DNA mismatch repair protein mutS 198 9e-49
gi|37680991|ref|NP_935600.1| mismatch repair ATPase [Vibrio vuln... 198 9e-49
gi|13027779|gb|AAK08648.1| putative mismatch repair protein MSH2... 197 1e-48
gi|50084669|ref|YP_046179.1| methyl-directed mismatch repair, re... 197 1e-48
gi|32731695|gb|AAP87090.1| DNA mismatch repair protein MutS [Sta... 197 1e-48
gi|15926878|ref|NP_374411.1| DNA mismatch repair protein [Staphy... 197 1e-48
gi|14194229|gb|AAK56305.1| DNA mismatch repair protein MutS [Sta... 197 1e-48
gi|127555|sp|P27345|MUTS_AZOVI DNA mismatch repair protein mutS ... 197 1e-48
gi|30047836|gb|AAH50897.1| MutS homolog 2 [Mus musculus] 197 1e-48
gi|6678938|ref|NP_032654.1| mutS homolog 2 [Mus musculus] >gnl|B... 197 1e-48
gi|15217083|gb|AAK92494.1| mismatch repair protein [Acinetobacte... 197 1e-48
gi|15639319|ref|NP_218768.1| DNA mismatch repair protein (mutS) ... 197 2e-48
gi|42630971|ref|ZP_00156509.1| COG0249: Mismatch repair ATPase (... 197 2e-48
gi|7287834|gb|AAF44872.1| symbol=spel1; synonym=BG:DS01068.9; cD... 197 2e-48
gi|16272647|ref|NP_438865.1| DNA mismatch repair protein [Haemop... 196 4e-48
gi|46188426|ref|ZP_00125872.2| COG0249: Mismatch repair ATPase (... 196 4e-48
gi|23112901|ref|ZP_00098327.1| COG0249: Mismatch repair ATPase (... 195 6e-48
gi|14009831|gb|AAK51796.1| putative mismatch repair protein MSH8... 195 6e-48
gi|15677973|ref|NP_275145.1| DNA mismatch repair protein MutS [N... 195 6e-48
gi|47226649|emb|CAG07808.1| unnamed protein product [Tetraodon n... 195 6e-48
gi|46128895|ref|ZP_00154530.2| COG0249: Mismatch repair ATPase (... 194 1e-47
gi|23099086|ref|NP_692552.1| DNA mismatch repair protein [Oceano... 194 1e-47
gi|7229490|gb|AAF42850.1| mismatch repair protein MutS [Pseudomo... 194 1e-47
gi|45519317|ref|ZP_00170868.1| COG0249: Mismatch repair ATPase (... 194 1e-47
gi|4139230|gb|AAD04176.1| mismatch repair protein [Arabidopsis t... 194 1e-47
gi|50310365|ref|XP_455202.1| unnamed protein product [Kluyveromy... 194 1e-47
gi|14348673|gb|AAK61336.1| mismatch repair protein Msh2p [Kluyve... 194 1e-47
gi|9864530|gb|AAG00261.1| MSH2 [Trypanosoma cruzi] 194 2e-47
gi|7108493|gb|AAF36440.1| mismatch repair system component MutS ... 193 2e-47
gi|15217089|gb|AAK92499.1| mismatch repair protein [Acinetobacte... 193 3e-47
gi|50554795|ref|XP_504806.1| hypothetical protein [Yarrowia lipo... 193 3e-47
gi|45645397|gb|AAS73298.1| DNA mismatch repair protein [Haemophi... 193 3e-47
gi|45645387|gb|AAS73293.1| DNA mismatch repair protein [Haemophi... 192 4e-47
gi|42520087|ref|NP_966002.1| DNA mismatch repair protein MutS [W... 192 4e-47
gi|48428294|sp|P61673|MUTS_WOLPM DNA mismatch repair protein mutS 192 4e-47
gi|49235253|ref|ZP_00329325.1| COG0249: Mismatch repair ATPase (... 192 5e-47
gi|42565226|ref|NP_566804.3| DNA mismatch repair protein MSH2 (M... 192 5e-47
gi|50590183|ref|ZP_00331597.1| COG0249: Mismatch repair ATPase (... 192 6e-47
gi|50543500|ref|XP_499916.1| hypothetical protein [Yarrowia lipo... 191 8e-47
gi|48833815|ref|ZP_00290831.1| COG0249: Mismatch repair ATPase (... 191 8e-47
gi|50405181|ref|YP_054273.1| DNA mismatch repair protein Msh2, p... 191 8e-47
gi|44888234|sp|Q8YES6|MUTS_BRUME DNA mismatch repair protein mutS 191 8e-47
gi|17988084|ref|NP_540718.1| DNA MISMATCH REPAIR PROTEIN MUTS [B... 191 8e-47
gi|45645395|gb|AAS73297.1| DNA mismatch repair protein [Haemophi... 191 1e-46
gi|23501058|ref|NP_697185.1| DNA mismatch repair protein MutS [B... 191 1e-46
gi|35367191|gb|AAN85564.1| MutS [Enterococcus faecium] 189 3e-46
gi|27597156|dbj|BAC55150.1| ORF23 [Methylobacillus sp. 12S] 189 3e-46
gi|35367182|gb|AAN85562.1| MutS [Enterococcus faecium] 189 4e-46
gi|48845722|ref|ZP_00299996.1| COG0249: Mismatch repair ATPase (... 189 4e-46
gi|48824210|ref|ZP_00285618.1| COG0249: Mismatch repair ATPase (... 188 7e-46
gi|24214846|ref|NP_712327.1| MutS protein [Leptospira interrogan... 188 7e-46
gi|45657640|ref|YP_001726.1| DNA mismatch repair protein [Leptos... 188 9e-46
gi|45645391|gb|AAS73295.1| DNA mismatch repair protein [Haemophi... 188 9e-46
gi|24374941|ref|NP_718984.1| DNA mismatch repair protein MutS [S... 187 1e-45
gi|16330413|ref|NP_441141.1| DNA mismatch repair protein [Synech... 187 2e-45
gi|7404405|sp|P73769|MUTS_SYNY3 DNA mismatch repair protein mutS 187 2e-45
gi|46121133|ref|ZP_00174003.2| COG0249: Mismatch repair ATPase (... 187 2e-45
gi|47574360|ref|ZP_00244396.1| COG0249: Mismatch repair ATPase (... 187 2e-45
gi|37524723|ref|NP_928067.1| DNA mismatch repair protein MutS [P... 187 2e-45
gi|15887696|ref|NP_353377.1| AGR_C_602p [Agrobacterium tumefacie... 186 3e-45
gi|17934261|ref|NP_531051.1| DNA mismatch repair protein, MutS f... 186 3e-45
gi|50425323|ref|XP_461255.1| unnamed protein product [Debaryomyc... 186 3e-45
gi|27904861|ref|NP_777987.1| DNA mismatch repair protein MutS [B... 186 5e-45
gi|3024198|sp|P70755|MUTS_AQUPY DNA mismatch repair protein mutS... 186 5e-45
gi|49615724|gb|AAT67044.1| DNA mismatch repair protein [Petunia ... 185 6e-45
gi|19704028|ref|NP_603590.1| DNA mismatch repair protein mutS [F... 184 1e-44
gi|15789484|ref|NP_279308.1| mismatch repair protein; MutS2 [Hal... 184 1e-44
gi|28378884|ref|NP_785776.1| DNA mismatch repair protein MutS [L... 184 1e-44
gi|30249667|ref|NP_841737.1| mutS; DNA mismatch repair protein [... 184 1e-44
gi|15789477|ref|NP_279301.1| mismatch repair protein; MutS1 [Hal... 183 2e-44
gi|16123504|ref|NP_406817.1| DNA mismatch repair protein MutS [Y... 183 3e-44
gi|46113088|ref|ZP_00182285.2| COG0249: Mismatch repair ATPase (... 182 4e-44
gi|41724552|ref|ZP_00151389.1| COG0249: Mismatch repair ATPase (... 182 4e-44
gi|7243293|dbj|BAA92687.1| mismatch repair system component MutS... 182 5e-44
gi|46308507|ref|ZP_00210700.1| COG0249: Mismatch repair ATPase (... 182 7e-44
gi|15964148|ref|NP_384501.1| PROBABLE DNA MISMATCH REPAIR PROTEI... 182 7e-44
gi|46228852|gb|EAK89722.1| MutS like ABC ATpase involved in DNA ... 181 9e-44
gi|33862201|ref|NP_893762.1| putative DNA mismatch repair protei... 180 2e-43
gi|17508445|ref|NP_491202.1| MutS Homolog (95.9 kD) (msh-2) [Cae... 179 3e-43
gi|15605835|ref|NP_213212.1| DNA mismatch repair protein MutS [A... 179 6e-43
gi|32488645|emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa (japo... 178 7e-43
gi|50306133|ref|XP_453028.1| unnamed protein product [Kluyveromy... 178 9e-43
gi|15674192|ref|NP_268367.1| mismatch repair protein [Lactococcu... 177 1e-42
gi|11386957|sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH... 177 1e-42
gi|32474719|ref|NP_867713.1| DNA mismatch repair protein MUTS [P... 177 2e-42
gi|23484124|gb|EAA19563.1| DNA mismatch repair protein msh2 [Pla... 176 3e-42
gi|48871118|ref|ZP_00323834.1| COG0249: Mismatch repair ATPase (... 176 4e-42
gi|23485142|gb|EAA20237.1| MutS homolog 2-related [Plasmodium yo... 176 4e-42
gi|14577935|gb|AAK68860.1| DNA mismatch repair protein HexA [Lac... 176 5e-42
gi|46203782|ref|ZP_00050988.2| COG0249: Mismatch repair ATPase (... 174 1e-41
gi|15217096|gb|AAK92503.1| mismatch repair protein [Acinetobacte... 174 2e-41
gi|15217094|gb|AAK92502.1| mismatch repair protein [Acinetobacte... 174 2e-41
gi|15605525|ref|NP_220311.1| DNA Mismatch Repair [Chlamydia trac... 174 2e-41
gi|1000885|gb|AAB59572.1| The deletion results in premature stop 173 3e-41
gi|45509267|ref|ZP_00161602.1| COG0249: Mismatch repair ATPase (... 172 5e-41
gi|26252149|gb|AAH40784.1| Unknown (protein for MGC:49148) [Mus ... 172 5e-41
gi|45513671|ref|ZP_00165237.1| COG0249: Mismatch repair ATPase (... 172 5e-41
gi|46439068|gb|EAK98390.1| hypothetical protein CaO19.496 [Candi... 171 2e-40
gi|21242056|ref|NP_641638.1| DNA mismatch repair protein [Xantho... 170 2e-40
gi|23129777|ref|ZP_00111600.1| COG0249: Mismatch repair ATPase (... 170 2e-40
gi|21951840|gb|AAM82366.1| mismatch repair protein MutS [Salmone... 170 2e-40
gi|21951842|gb|AAM82367.1| mismatch repair protein MutS [Salmone... 170 2e-40
gi|17231130|ref|NP_487678.1| DNA mismatch repair protein [Nostoc... 170 3e-40
gi|33149555|gb|AAP96858.1| MutS protein [Salmonella enterica] 169 4e-40
gi|33149591|gb|AAP96876.1| MutS protein [Salmonella enterica] 169 4e-40
gi|33149537|gb|AAP96849.1| MutS protein [Salmonella enterica] 169 4e-40
gi|33149503|gb|AAP96832.1| MutS protein [Salmonella enterica] >g... 169 4e-40
gi|33149637|gb|AAP96899.1| MutS protein [Salmonella enterica] 169 4e-40
gi|33149581|gb|AAP96871.1| MutS protein [Salmonella enterica] 169 4e-40
gi|21951820|gb|AAM82356.1| mismatch repair protein MutS [Salmone... 169 4e-40
gi|22087665|gb|AAM90996.1| DNA mismatch repair protein [Fusobact... 169 4e-40
gi|16761683|ref|NP_457300.1| DNA mismatch repair protein [Salmon... 169 4e-40
gi|79102|pir||A28668 DNA mismatch repair protein mutS - Salmonel... 169 4e-40
gi|33149623|gb|AAP96892.1| MutS protein [Salmonella enterica] 169 6e-40
gi|33149593|gb|AAP96877.1| MutS protein [Salmonella enterica] 169 6e-40
gi|21951832|gb|AAM82362.1| mismatch repair protein MutS [Salmone... 169 6e-40
gi|7387928|sp|Q9ZIX6|MUTS_THECA DNA mismatch repair protein mutS... 169 6e-40
gi|33149557|gb|AAP96859.1| MutS protein [Salmonella enterica] 168 7e-40
gi|21951852|gb|AAM82372.1| mismatch repair protein MutS [Escheri... 168 7e-40
gi|34810696|pdb|1OH5|A Chain A, The Crystal Structure Of E. Coli... 168 7e-40
gi|17017340|gb|AAL33627.1| MutS [Escherichia coli] 168 7e-40
gi|15832843|ref|NP_311616.1| MutS [Escherichia coli O157:H7] >gn... 168 7e-40
gi|24114026|ref|NP_708536.1| MutS protein [Shigella flexneri 2a ... 168 7e-40
gi|26249133|ref|NP_755173.1| DNA mismatch repair protein mutS [E... 168 7e-40
gi|16130640|ref|NP_417213.1| methyl-directed mismatch repair; me... 168 7e-40
gi|1592569|gb|AAB97931.1| DNA mismatch repair protein [Escherich... 168 7e-40
gi|33149553|gb|AAP96857.1| MutS protein [Salmonella enterica] 168 1e-39
gi|15803252|ref|NP_289284.1| methyl-directed mismatch repair [Es... 168 1e-39
gi|33149523|gb|AAP96842.1| MutS protein [Salmonella enterica] 167 1e-39
gi|33864614|ref|NP_896173.1| putative DNA mismatch repair protei... 167 1e-39
gi|21230664|ref|NP_636581.1| DNA mismatch repair protein [Xantho... 167 1e-39
gi|33862352|ref|NP_893912.1| putative DNA mismatch repair protei... 167 2e-39
gi|34763050|ref|ZP_00144024.1| DNA mismatch repair protein mutS ... 167 2e-39
gi|21951828|gb|AAM82360.1| mismatch repair protein MutS [Salmone... 167 2e-39
gi|21951838|gb|AAM82365.1| mismatch repair protein MutS [Salmone... 167 2e-39
gi|33600645|ref|NP_888205.1| mismatch repair protein [Bordetella... 167 2e-39
gi|44888187|sp|Q7WLT5|MUTS_BORBR DNA mismatch repair protein mutS 167 2e-39
gi|33149603|gb|AAP96882.1| MutS protein [Salmonella enterica] 167 2e-39
gi|15924286|ref|NP_371820.1| DNA mismatch repair protein [Staphy... 167 2e-39
gi|48868424|ref|ZP_00321760.1| COG0249: Mismatch repair ATPase (... 167 2e-39
gi|49483458|ref|YP_040682.1| DNA mismatch repair protein MutS [S... 167 2e-39
gi|21951836|gb|AAM82364.1| mismatch repair protein MutS [Salmone... 167 2e-39
gi|29840586|ref|NP_829692.1| DNA mismatch repair protein MutS [C... 167 2e-39
gi|37496418|emb|CAC88861.1| MutS protein [Ralstonia solanacearum] 167 2e-39
gi|33596868|ref|NP_884511.1| mismatch repair protein [Bordetella... 166 3e-39
gi|44888185|sp|Q7W880|MUTS_BORPA DNA mismatch repair protein mutS 166 3e-39
gi|28948844|pdb|1NG9|A Chain A, E.Coli Muts R697a: An Atpase-Asy... 166 4e-39
gi|33592656|ref|NP_880300.1| mismatch repair protein [Bordetella... 166 4e-39
gi|45645393|gb|AAS73296.1| DNA mismatch repair protein [Haemophi... 165 6e-39
gi|45645389|gb|AAS73294.1| DNA mismatch repair protein [Haemophi... 165 6e-39
gi|45645383|gb|AAS73291.1| DNA mismatch repair protein [Haemophi... 165 6e-39
gi|21951830|gb|AAM82361.1| mismatch repair protein MutS [Salmone... 165 6e-39
gi|45185367|ref|NP_983084.1| ABR137Wp [Eremothecium gossypii] >g... 165 6e-39
gi|23475239|ref|ZP_00130528.1| COG0249: Mismatch repair ATPase (... 165 8e-39
gi|45915111|ref|ZP_00193653.2| COG0249: Mismatch repair ATPase (... 165 8e-39
gi|6166561|sp|O13921|MSH1_SCHPO MutS protein homolog 1 >gnl|BL_O... 165 8e-39
gi|50312249|ref|XP_456156.1| unnamed protein product [Kluyveromy... 164 1e-38
gi|28198974|ref|NP_779288.1| DNA mismatch repair protein [Xylell... 164 1e-38
gi|32129770|sp|Q9PCR2|MUTS_XYLFA DNA mismatch repair protein mutS 164 1e-38
gi|15838317|ref|NP_299005.1| mismatch repair protein [Xylella fa... 164 1e-38
gi|22996017|ref|ZP_00040293.1| COG0249: Mismatch repair ATPase (... 164 1e-38
gi|37520602|ref|NP_923979.1| DNA mismatch repair protein [Gloeob... 164 2e-38
gi|22994002|ref|ZP_00038530.1| COG0249: Mismatch repair ATPase (... 164 2e-38
gi|19114561|ref|NP_593649.1| muts protein homolog 1 [Schizosacch... 163 2e-38
gi|7188744|gb|AAF37851.1| mismatch repair protein MutS [Sinorhiz... 163 2e-38
gi|13474446|ref|NP_106014.1| DNA mismatch repair protein mutS [M... 163 3e-38
gi|39933589|ref|NP_945865.1| DNA mismatch repair protein mutS [R... 163 3e-38
gi|22299783|ref|NP_683030.1| DNA mismatch repair protein [Thermo... 163 3e-38
gi|47092692|ref|ZP_00230478.1| DNA mismatch repair protein MutS ... 162 4e-38
gi|46580059|ref|YP_010867.1| DNA mismatch repair protein MutS [D... 162 4e-38
gi|50739071|ref|XP_426110.1| PREDICTED: similar to hypothetical ... 162 5e-38
gi|50119993|ref|YP_049160.1| DNA mismatch repair protein [Erwini... 162 7e-38
gi|27376035|ref|NP_767564.1| DNA mismatch repair protein [Bradyr... 162 7e-38
gi|46446855|ref|YP_008220.1| putative DNA mismatch repair protei... 162 7e-38
gi|16124268|ref|NP_418832.1| DNA mismatch repair protein MutS [C... 161 9e-38
gi|33152989|ref|NP_874342.1| DNA mismatch repair protein MutS [H... 161 9e-38
gi|48763860|ref|ZP_00268413.1| COG0249: Mismatch repair ATPase (... 161 1e-37
gi|23016472|ref|ZP_00056227.1| COG0249: Mismatch repair ATPase (... 159 3e-37
gi|11514100|pdb|1E3M|A Chain A, The Crystal Structure Of E. Coli... 159 6e-37
gi|23499288|emb|CAD51365.1| PF00_0002 [Plasmodium falciparum 3D7... 159 6e-37
gi|50428111|ref|XP_457638.1| unnamed protein product [Debaryomyc... 159 6e-37
gi|28200489|gb|AAO31616.1| DNA mismatch repair protein [Vibrio v... 158 8e-37
gi|48850476|ref|ZP_00304718.1| COG0249: Mismatch repair ATPase (... 158 1e-36
gi|21672681|ref|NP_660748.1| DNA mismatch repair protein MutS [B... 157 1e-36
gi|7328295|emb|CAB82462.1| DNA mismatch repair protein [Staphylo... 156 3e-36
gi|15217092|gb|AAK92501.1| mismatch repair protein [Acinetobacte... 155 5e-36
gi|15617028|ref|NP_240241.1| DNA mismatch repair protein MutS [B... 155 7e-36
gi|48475216|gb|AAT44285.1| unknown protein [Oryza sativa (japoni... 154 2e-35
gi|32033435|ref|ZP_00133779.1| COG0249: Mismatch repair ATPase (... 153 2e-35
gi|2145507|pir||S62790 mismatch DNA recognition protein mutS [va... 152 6e-35
gi|46199262|ref|YP_004929.1| DNA mismatch repair protein mutS [T... 152 6e-35
gi|2497996|sp|Q56239|MUTS_THETH DNA mismatch repair protein mutS 152 6e-35
gi|1871501|dbj|BAA09880.1| MutS [Thermus thermophilus] 152 6e-35
gi|22960355|ref|ZP_00007996.1| COG0249: Mismatch repair ATPase (... 151 9e-35
gi|39586272|emb|CAE66683.1| Hypothetical protein CBG12022 [Caeno... 151 1e-34
gi|36949366|ref|NP_002431.2| mutS homolog 4; mutS (E. coli) homo... 150 2e-34
gi|2463653|gb|AAB72039.1| MSH4 [Homo sapiens] 150 3e-34
gi|21542526|gb|AAH33030.1| MutS homolog 4 [Homo sapiens] 150 3e-34
gi|38104682|gb|EAA51216.1| hypothetical protein MG08738.4 [Magna... 148 8e-34
gi|33519230|gb|AAQ20788.1| MutS homolog 4 variant alpha [Mus mus... 148 8e-34
gi|48893307|ref|ZP_00326576.1| COG0249: Mismatch repair ATPase (... 148 8e-34
gi|33519232|gb|AAQ20789.1| MutS homolog 4 variant beta [Mus musc... 148 8e-34
gi|19112758|ref|NP_595966.1| dna mismatch repair protein Msh2p [... 148 8e-34
gi|23168970|gb|AAN08917.1| putative mismatch repair protein MSH3... 148 8e-34
gi|26396556|sp|O74773|MSH2_SCHPO DNA mismatch repair protein msh... 148 8e-34
gi|13994197|ref|NP_114076.1| mutS homolog 4 [Mus musculus] >gnl|... 148 1e-33
gi|2497995|sp|Q56215|MUTS_THEAQ DNA mismatch repair protein mutS... 147 1e-33
gi|31615694|pdb|1NNE|A Chain A, Crystal Structure Of The Muts-Ad... 147 1e-33
gi|50293845|ref|XP_449334.1| unnamed protein product [Candida gl... 147 1e-33
gi|16416651|gb|AAL18350.1| MutS homolog 4 [Mus musculus] 147 2e-33
gi|50255429|gb|EAL18164.1| hypothetical protein CNBK1840 [Crypto... 145 7e-33
gi|47087111|ref|NP_997701.1| mutS homolog 5 [Rattus norvegicus] ... 145 7e-33
gi|49087334|ref|XP_405616.1| hypothetical protein AN1479.2 [Aspe... 145 9e-33
gi|5725250|emb|CAB52406.1| G7 protein [Homo sapiens] 142 4e-32
gi|13241522|gb|AAK16354.1| DNA mismatch repair protein MutS [Esc... 142 7e-32
gi|13241544|gb|AAK16365.1| DNA mismatch repair protein MutS [Esc... 142 7e-32
gi|8052216|emb|CAB92351.1| MutS protein [Escherichia coli] 141 1e-31
gi|4100661|gb|AAD00921.1| DNA mismatch repair protein [Escherich... 141 1e-31
gi|13241460|gb|AAK16323.1| DNA mismatch repair protein MutS [Esc... 141 1e-31
gi|3986757|gb|AAC84154.1| MutS homolog [Mus musculus] >gnl|BL_OR... 141 1e-31
gi|7305281|ref|NP_038628.1| mutS homolog 5 [Mus musculus] >gnl|B... 141 1e-31
gi|17534743|ref|NP_495451.1| germline-specific mismatch repair M... 141 1e-31
gi|50083056|gb|AAT70180.1| MSH4 [Arabidopsis thaliana] 141 1e-31
gi|26638662|ref|NP_079535.3| mutS homolog 5 isoform a; mutS (E. ... 141 1e-31
gi|13241478|gb|AAK16332.1| DNA mismatch repair protein MutS [Esc... 141 1e-31
gi|13241490|gb|AAK16338.1| DNA mismatch repair protein MutS [Esc... 141 1e-31
gi|13241476|gb|AAK16331.1| DNA mismatch repair protein MutS [Esc... 141 1e-31
gi|4505253|ref|NP_002432.1| mutS homolog 5 isoform c; mutS (E. c... 141 1e-31
gi|13399878|pdb|1FW6|A Chain A, Crystal Structure Of A Taq Muts-... 140 2e-31
gi|13241594|gb|AAK16390.1| DNA mismatch repair protein MutS [Esc... 140 2e-31
gi|11514356|pdb|1EWQ|A Chain A, Crystal Structure Taq Muts Compl... 140 2e-31
gi|13241560|gb|AAK16373.1| DNA mismatch repair protein MutS [Esc... 140 2e-31
gi|13241596|gb|AAK16391.1| DNA mismatch repair protein MutS [Esc... 140 2e-31
gi|13241466|gb|AAK16326.1| DNA mismatch repair protein MutS [Esc... 140 2e-31
gi|11514361|pdb|1EWR|A Chain A, Crystal Structure Of Taq Muts >g... 140 2e-31
gi|13241600|gb|AAK16393.1| DNA mismatch repair protein MutS [Esc... 140 3e-31
gi|3108220|gb|AAC62533.1| MutS homolog 5 [Homo sapiens] 140 3e-31
gi|13241484|gb|AAK16335.1| DNA mismatch repair protein MutS [Esc... 139 4e-31
gi|13241540|gb|AAK16363.1| DNA mismatch repair protein MutS [Esc... 139 4e-31
gi|34861090|ref|XP_227831.2| similar to MutS homolog 4 [Rattus n... 139 4e-31
gi|46108970|ref|XP_381543.1| hypothetical protein FG01367.1 [Gib... 139 4e-31
gi|46124901|ref|XP_387004.1| hypothetical protein FG06828.1 [Gib... 139 5e-31
gi|13241602|gb|AAK16394.1| DNA mismatch repair protein MutS [Esc... 139 5e-31
gi|13241498|gb|AAK16342.1| DNA mismatch repair protein MutS [Esc... 139 5e-31
gi|25396654|pir||E88197 protein him-14 [imported] - Caenorhabdit... 139 5e-31
gi|13241530|gb|AAK16358.1| DNA mismatch repair protein MutS [Esc... 139 6e-31
gi|13241576|gb|AAK16381.1| DNA mismatch repair protein MutS [Esc... 139 6e-31
gi|13241502|gb|AAK16344.1| DNA mismatch repair protein MutS [Esc... 139 6e-31
gi|13241580|gb|AAK16383.1| DNA mismatch repair protein MutS [Esc... 138 1e-30
gi|13241578|gb|AAK16382.1| DNA mismatch repair protein MutS [Esc... 138 1e-30
gi|50256039|gb|EAL18767.1| hypothetical protein CNBI2590 [Crypto... 137 1e-30
gi|13241526|gb|AAK16356.1| DNA mismatch repair protein MutS [Esc... 137 1e-30
gi|13241586|gb|AAK16386.1| DNA mismatch repair protein MutS [Esc... 137 1e-30
gi|13241500|gb|AAK16343.1| DNA mismatch repair protein MutS [Esc... 137 1e-30
gi|13241508|gb|AAK16347.1| DNA mismatch repair protein MutS [Shi... 137 2e-30
gi|26638664|ref|NP_751897.1| mutS homolog 5 isoform b; mutS (E. ... 137 2e-30
gi|13241572|gb|AAK16379.1| DNA mismatch repair protein MutS [Esc... 137 2e-30
gi|30584843|gb|AAP36674.1| Homo sapiens mutS homolog 5 (E. coli)... 137 2e-30
gi|14318519|ref|NP_116652.1| dispensable for DNA repair, require... 137 2e-30
gi|730066|sp|P40965|MSH4_YEAST MUTS protein homolog 4 >gnl|BL_OR... 137 2e-30
gi|48097380|ref|XP_393768.1| similar to MSH4 [Apis mellifera] 136 3e-30
gi|46442333|gb|EAL01623.1| hypothetical protein CaO19.2713 [Cand... 136 3e-30
gi|13241590|gb|AAK16388.1| DNA mismatch repair protein MutS [Esc... 136 3e-30
gi|46122645|ref|XP_385876.1| hypothetical protein FG05700.1 [Gib... 136 4e-30
gi|11359791|pir||T43201 MutS protein homolog - Caenorhabditis el... 135 7e-30
gi|17539736|ref|NP_502531.1| MutS Homolog, germline specific DNA... 135 7e-30
gi|46440004|gb|EAK99315.1| hypothetical protein CaO19.2579 [Cand... 135 7e-30
gi|13241512|gb|AAK16349.1| DNA mismatch repair protein MutS [Shi... 135 9e-30
gi|50546479|ref|XP_500709.1| hypothetical protein [Yarrowia lipo... 135 9e-30
gi|30580411|sp|O94065|MSH4_CANAL MUTS protein homolog 4 >gnl|BL_... 134 1e-29
gi|6320047|ref|NP_010127.1| Protein of the MutS family, forms a ... 134 2e-29
gi|47210390|emb|CAF91023.1| unnamed protein product [Tetraodon n... 134 2e-29
gi|49079686|ref|XP_403461.1| hypothetical protein UM05846.1 [Ust... 133 3e-29
gi|1582703|prf||2119252A MSH5 gene 133 3e-29
gi|7448107|pir||T08098 probable DNA mismatch repair protein mutS... 132 5e-29
gi|48120552|ref|XP_393225.1| similar to CG1453-PA [Apis mellifera] 132 5e-29
gi|45548309|ref|ZP_00188342.1| COG0249: Mismatch repair ATPase (... 132 6e-29
gi|13241568|gb|AAK16377.1| DNA mismatch repair protein MutS [Esc... 132 6e-29
gi|41719274|ref|ZP_00148178.1| COG0249: Mismatch repair ATPase (... 131 1e-28
gi|13241536|gb|AAK16361.1| DNA mismatch repair protein MutS [Esc... 131 1e-28
gi|33519234|gb|AAQ20790.1| MutS homolog 4 variant gamma [Mus mus... 130 2e-28
gi|19173014|ref|NP_597565.1| DNA MISMATCH REPAIR PROTEIN [Enceph... 130 2e-28
gi|6321912|ref|NP_011988.1| mutS homolog involved in mitochondri... 130 2e-28
gi|172000|gb|AAA34801.1| homologue of bacterial MutS protein 130 2e-28
gi|13241514|gb|AAK16350.1| DNA mismatch repair protein MutS [Shi... 130 2e-28
gi|13241518|gb|AAK16352.1| DNA mismatch repair protein MutS [Shi... 130 3e-28
gi|38104087|gb|EAA50707.1| hypothetical protein MG04466.4 [Magna... 129 4e-28
gi|32414427|ref|XP_327693.1| hypothetical protein [Neurospora cr... 128 9e-28
gi|38108904|gb|EAA54848.1| hypothetical protein MG05639.4 [Magna... 128 9e-28
gi|50311117|ref|XP_455582.1| unnamed protein product [Kluyveromy... 128 9e-28
gi|26996739|gb|AAH41031.1| MSH5 protein [Homo sapiens] 128 1e-27
gi|50287275|ref|XP_446067.1| unnamed protein product [Candida gl... 128 1e-27
gi|13241510|gb|AAK16348.1| DNA mismatch repair protein MutS [Shi... 127 1e-27
gi|33519242|gb|AAQ20795.1| MutS homolog 4 variant theta 2 [Mus m... 127 1e-27
gi|13182948|gb|AAK15001.1| Msh4p-related protein [Candida glabra... 127 2e-27
gi|13241506|gb|AAK16346.1| DNA mismatch repair protein MutS [Shi... 127 2e-27
gi|50260513|gb|EAL23168.1| hypothetical protein CNBA5130 [Crypto... 126 3e-27
gi|15236048|ref|NP_193469.1| DNA mismatch repair MutS family pro... 125 7e-27
gi|46442092|gb|EAL01384.1| hypothetical protein CaO19.10228 [Can... 124 1e-26
gi|50289945|ref|XP_447404.1| unnamed protein product [Candida gl... 124 2e-26
gi|47230170|emb|CAG10584.1| unnamed protein product [Tetraodon n... 124 2e-26
gi|50305947|ref|XP_452934.1| unnamed protein product [Kluyveromy... 121 1e-25
gi|22971986|ref|ZP_00018894.1| hypothetical protein [Chloroflexu... 119 4e-25
gi|45773926|gb|AAS76767.1| At3g20475 [Arabidopsis thaliana] 119 5e-25
gi|32815504|gb|AAP88157.1| MutS [Bacillus anthracis] >gnl|BL_ORD... 118 9e-25
gi|32815524|gb|AAP88167.1| MutS [Bacillus cereus] >gnl|BL_ORD_ID... 118 9e-25
gi|32815528|gb|AAP88169.1| MutS [Bacillus cereus] >gnl|BL_ORD_ID... 118 9e-25
gi|32815538|gb|AAP88174.1| MutS [Bacillus cereus] >gnl|BL_ORD_ID... 118 9e-25
gi|32815598|gb|AAP88204.1| MutS [Bacillus mycoides] 118 9e-25
gi|32815564|gb|AAP88187.1| MutS [Bacillus cereus] >gnl|BL_ORD_ID... 118 9e-25
gi|110917|pir||A32495 rep-1 protein, form A - mouse 118 1e-24
gi|32815520|gb|AAP88165.1| MutS [Bacillus anthracis] >gnl|BL_ORD... 117 3e-24
gi|49081052|ref|XP_403976.1| hypothetical protein UM06361.1 [Ust... 114 1e-23
gi|47225430|emb|CAG11913.1| unnamed protein product [Tetraodon n... 114 1e-23
gi|32423277|ref|XP_332076.1| hypothetical protein [Neurospora cr... 113 4e-23
gi|29247495|gb|EAA39055.1| GLP_21_30436_27545 [Giardia lamblia A... 112 6e-23
gi|5305132|emb|CAB46193.1| mismatch binding protein [Pseudomonas... 112 8e-23
gi|5814102|gb|AAD52100.1| MSH5 [Mus musculus] 111 1e-22
gi|4099512|gb|AAD00647.1| MutS homolog 2 [Arabidopsis thaliana] 111 1e-22
gi|39579383|emb|CAE56902.1| Hypothetical protein CBG24743 [Caeno... 110 2e-22
gi|7512546|pir||T34526 hypothetical protein DKFZp434C1615.1 - hu... 110 3e-22
>gi|17508447|ref|NP_491163.1| MutS Homolog (133.6 kD) (msh-6)
[Caenorhabditis elegans]
gi|15375264|gb|AAK95890.1| Msh (muts homolog) family protein 6
[Caenorhabditis elegans]
Length = 1186
Score = 2165 bits (5609), Expect = 0.0
Identities = 1099/1186 (92%), Positives = 1099/1186 (92%)
Frame = +1
Query: 1 MSKRQSSLMSFFXXXXXXXXXXXXXXXXXXXXXXXLKNDTPKISNDSEKKVLKRSNSKTV 180
MSKRQSSLMSFF LKNDTPKISNDSEKKVLKRSNSKTV
Sbjct: 1 MSKRQSSLMSFFTKTPKSEKPEEEVKEKSVEEPKSLKNDTPKISNDSEKKVLKRSNSKTV 60
Query: 181 SSPVKTPRNASKRPKVVVCXXXXXXXXXXXXXFEMKXXXXXXXXXXXXXXXXXXXXXVVE 360
SSPVKTPRNASKRPKVVVC FEMK VVE
Sbjct: 61 SSPVKTPRNASKRPKVVVCSSSEGEDDDGDEDFEMKEAEEHESSDESEADENASDCEVVE 120
Query: 361 SPESTPQSTPKRGGKKKISKPLLAENTPKSVKMAGKSKKVIPDGEAVSMAGVLDKMDKIM 540
SPESTPQSTPKRGGKKKISKPLLAENTPKSVKMAGKSKKVIPDGEAVSMAGVLDKMDKIM
Sbjct: 121 SPESTPQSTPKRGGKKKISKPLLAENTPKSVKMAGKSKKVIPDGEAVSMAGVLDKMDKIM 180
Query: 541 DGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPKTL 720
DGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPKTL
Sbjct: 181 DGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPKTL 240
Query: 721 WVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRGSY 900
WVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRGSY
Sbjct: 241 WVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRGSY 300
Query: 901 AHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQXXXXXXXXXXXXXXXXXSN 1080
AHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQ SN
Sbjct: 301 AHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQKTKTKEKVVRREVCRVTSN 360
Query: 1081 GTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPETGKSSYGVCMIDTTTAHIRIGQF 1260
GTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPETGKSSYGVCMIDTTTAHIRIGQF
Sbjct: 361 GTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPETGKSSYGVCMIDTTTAHIRIGQF 420
Query: 1261 EDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDV 1440
EDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDV
Sbjct: 421 EDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDV 480
Query: 1441 VRIVSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLIDVD 1620
VRIVSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLIDVD
Sbjct: 481 VRIVSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLIDVD 540
Query: 1621 MLSMRNVTIYNSNSMENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLTSLYYVIN 1800
MLSMRNVTIYNSNSMENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLTSLYYVIN
Sbjct: 541 MLSMRNVTIYNSNSMENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLTSLYYVIN 600
Query: 1801 KCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDRL 1980
KCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDRL
Sbjct: 601 KCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDRL 660
Query: 1981 LQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQKX 2160
LQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQK
Sbjct: 661 LQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQKE 720
Query: 2161 XXXXXXXXXXXXNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVK 2340
NEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVK
Sbjct: 721 GEGCELLDELLGNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVK 780
Query: 2341 EALNELNDYKDSVAKKYSCSIKFVDSGKVKYLLEMPENTKVSSSFELKSRRKGFIRYSTP 2520
EALNELNDYKDSVAKKYSCSIKFVDSGKVKYLLEMPENTKVSSSFELKSRRKGFIRYSTP
Sbjct: 781 EALNELNDYKDSVAKKYSCSIKFVDSGKVKYLLEMPENTKVSSSFELKSRRKGFIRYSTP 840
Query: 2521 DSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKS 2700
DSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKS
Sbjct: 841 DSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKS 900
Query: 2701 SPFEMCMPEFDFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAAVMLL 2880
SPFEMCMPEFDFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAAVMLL
Sbjct: 901 SPFEMCMPEFDFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAAVMLL 960
Query: 2881 TGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFI 3060
TGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFI
Sbjct: 961 TGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFI 1020
Query: 3061 ELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSI 3240
ELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSI
Sbjct: 1021 ELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSI 1080
Query: 3241 CDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQ 3420
CDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQ
Sbjct: 1081 CDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQ 1140
Query: 3421 VVRNAYLESNKFASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI 3558
VVRNAYLESNKFASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI
Sbjct: 1141 VVRNAYLESNKFASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI 1186
>gi|39598285|emb|CAE68977.1| Hypothetical protein CBG14959
[Caenorhabditis briggsae]
Length = 1185
Score = 1803 bits (4671), Expect = 0.0
Identities = 915/1191 (76%), Positives = 1000/1191 (83%), Gaps = 5/1191 (0%)
Frame = +1
Query: 1 MSKRQSSLMSFFXXXXXXXXXXXXXXXXXXXXXXXLKNDTPKISNDSEKKVLKRSNSKTV 180
MSKRQSSLMSFF + N K S EKKVLKR+NS+TV
Sbjct: 1 MSKRQSSLMSFFTKTPKSEKLETENEKKKEP----IVNAKEKGSQVEEKKVLKRTNSQTV 56
Query: 181 SSPVKTPRNASKRPKVVVCXXXXXXXXXXXXXFEMKXXXXXXXXXXXXXXXXXXXXXVVE 360
SSPVKTPR A+KR +VV+ FEMK
Sbjct: 57 SSPVKTPRTATKRARVVL--SSSEGEDDDDEDFEMKDAEAAQESSEESEGDENASDDCEV 114
Query: 361 SPESTPQSTPKRGGKKKISKPLLAENTPKSVKMA--GKSKKVIPDGEAVSMAGVLDKMDK 534
+ ESTPQ+TPK K+ + TPKSVK + GK ++VIP+GE VSMA V +K++K
Sbjct: 115 TYESTPQTTPKNTPKRNKKLTKVLSETPKSVKSSAIGKVRRVIPEGEEVSMAVVEEKIEK 174
Query: 535 IMDGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPK 714
IM+GE ERK+ V+K K + E EP ERFDHES D+LKPDKIRD KR MSDPEYDPK
Sbjct: 175 IMEGELERKKNVDKGGSKKKQQEEEEPTERFDHESLDWLKPDKIRDASKRAMSDPEYDPK 234
Query: 715 TLWVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRG 894
TLWVPPDFH KQTPGHRQWWT+KSQHFDTI+LFKVGKFYETYHMDAVEVVRALNIAFMRG
Sbjct: 235 TLWVPPDFHLKQTPGHRQWWTIKSQHFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRG 294
Query: 895 SYAHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQXXXXXXXXXXXXXXXXX 1074
SYAHAGFPEHAASKFADQLMNHGYKVAR+EQTETPQMLEERNQ
Sbjct: 295 SYAHAGFPEHAASKFADQLMNHGYKVARVEQTETPQMLEERNQKAKSKDKVVRREVCRVT 354
Query: 1075 SNGTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPETGKSSYGVCMIDTTTAHIRIG 1254
SNGTRTYGVLDGVDLGSA+STLDPTAKHLLAIKEFHN ETGKS+YGVCMIDTTTAHIR+G
Sbjct: 355 SNGTRTYGVLDGVDLGSATSTLDPTAKHLLAIKEFHNTETGKSTYGVCMIDTTTAHIRVG 414
Query: 1255 QFEDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAE 1434
QFEDDDYRSQLRTL ANVIVVQ +VER S+S +TKSIINGILFSVP+EHLLPKKQF+TAE
Sbjct: 415 QFEDDDYRSQLRTLFANVIVVQTLVERSSMSVSTKSIINGILFSVPIEHLLPKKQFLTAE 474
Query: 1435 DVVRIVSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLID 1614
D VR +S +DY+GS+ S WP+VLK ML+DSS+LPKPS+ WQLA SAFGAI WYLRDSLID
Sbjct: 475 DCVRDLSKDDYFGSEVSGWPDVLKLMLDDSSVLPKPSSKWQLAFSAFGAIVWYLRDSLID 534
Query: 1615 VDMLSMRNVTIYNSNSMEND---QKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLTSL 1785
VDM+SMRN+T+Y+SN+ + + Q+ +K+DW GK+LILDGT LENLNIVPNGRDSHLTSL
Sbjct: 535 VDMISMRNITLYDSNNSKPEKINQEDDKVDWKGKHLILDGTVLENLNIVPNGRDSHLTSL 594
Query: 1786 YYVINKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIP 1965
YYV+NKCSTPFGRRLLRSWLLQPTCDP L RQ+AIKW++S DA SF +TA ATLKKIP
Sbjct: 595 YYVLNKCSTPFGRRLLRSWLLQPTCDPATLRLRQEAIKWMISSDAESFFSTAIATLKKIP 654
Query: 1966 DLDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYI 2145
DLDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKI ELLAAIDGFKLCNKLRKEY
Sbjct: 655 DLDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYQ 714
Query: 2146 KVQKXXXXXXXXXXXXXNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEA 2325
VQ+ NEQ++EEVDENI++FEKMFDR+TA+KDGKIVPNAGCD+EYD+A
Sbjct: 715 TVQQEGEGCELLDELLGNEQQVEEVDENIFYFEKMFDRTTALKDGKIVPNAGCDDEYDQA 774
Query: 2326 LNRVKEALNELNDYKDSVAKKYSCSIKFVDSGKVKYLLEMPENTKVSSSFELKSRRKGFI 2505
+VKEAL+ELN YKD +AKKYSCSIKFVDSGKVKYLLEMPENTKVSS FELKSRRKGFI
Sbjct: 775 TAKVKEALSELNAYKDKIAKKYSCSIKFVDSGKVKYLLEMPENTKVSSDFELKSRRKGFI 834
Query: 2506 RYSTPDSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLA 2685
RYSTPDSE+LVA LD EKEKSKLGDDATRRVFEQFGHKNPIWLETV+LVS FDVLTSLA
Sbjct: 835 RYSTPDSEELVAFLDIAEKEKSKLGDDATRRVFEQFGHKNPIWLETVQLVSKFDVLTSLA 894
Query: 2686 LFAKSSPFEMCMPEFDFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEA 2865
F+KSSPF+M MPEFDF + PYLIV+KG+HPCLALQSRNEVTQTTSFIANSTTMG +EA
Sbjct: 895 TFSKSSPFDMTMPEFDFESAKPYLIVEKGLHPCLALQSRNEVTQTTSFIANSTTMGQTEA 954
Query: 2866 AVMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGE 3045
AVMLLTGPNMGGKSTLMRQTAVLAILAH+G MVPAFSMRLTPIDRIFTRIGANDRIMCGE
Sbjct: 955 AVMLLTGPNMGGKSTLMRQTAVLAILAHMGCMVPAFSMRLTPIDRIFTRIGANDRIMCGE 1014
Query: 3046 STFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFST 3225
STFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKI++DL CRTFFST
Sbjct: 1015 STFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKIANDLVCRTFFST 1074
Query: 3226 HYHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLA 3405
HYHSICDSFTNHPN+RLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLA
Sbjct: 1075 HYHSICDSFTNHPNIRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLA 1134
Query: 3406 GIDHQVVRNAYLESNKFASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI 3558
GID +VVR AY ESNKFASNLIIDPKIRHLVECARDD+FDV +LK+MIEAI
Sbjct: 1135 GIDQKVVRVAYAESNKFASNLIIDPKIRHLVECARDDSFDVTKLKQMIEAI 1185
>gi|15625580|gb|AAL04170.1| mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 680 bits (1755), Expect = 0.0
Identities = 420/1115 (37%), Positives = 613/1115 (54%), Gaps = 50/1115 (4%)
Frame = +1
Query: 364 PESTPQSTPKRGGKKK-ISKPLLAENTPKSVKMAGKS-KKVIPDGEA-VSMAGVLDKMDK 534
PE+ P S K +K+ KP +++ P++ K A + V D ++ +S D D
Sbjct: 291 PETEPDSPVKPIKRKRPTEKPTKSKSKPETPKRAPAALPSVSTDAKSRLSAFSAPDNFDS 350
Query: 535 IMDGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPK 714
G T G +DHE ++L+ K +D ++ SD YDP
Sbjct: 351 QNSANG--------TEGGSTV---------WDHEKLEWLQDGKRKDAQRKRQSDENYDPT 393
Query: 715 TLWVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRG 894
TL+VP DF + TPG R+WW +KS+ FDT+L +KVGKFYE YHMDAV V LN+ FM+G
Sbjct: 394 TLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYHMDAVIGVNELNLTFMKG 453
Query: 895 SYAHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQXXXXXXXXXXXXXXXX- 1071
++AH+GFPE +F+D L+ GYKVAR+EQTETP M+E R +
Sbjct: 454 TWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPDMMEARCKKLARPTKFDKVVKREVC 513
Query: 1072 --XSNGTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPE-TGKSS-YGVCMIDTTTA 1239
+ GT+TY VLDG + S K+LL+IKE + TG YGVC IDT+
Sbjct: 514 RIITRGTQTYSVLDGAPSETQS-------KYLLSIKEKSEEDSTGHGHIYGVCFIDTSVG 566
Query: 1240 HIRIGQFEDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQ 1419
IGQF+DD + S+LRTL+A+ Q I E+G+ S T I I+ S E L Q
Sbjct: 567 RFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVASSLQEGLNAGSQ 626
Query: 1420 FMTAEDVVRIVSNEDYY------GSDASEWPEVLKGMLEDSSILP-KPSTDWQLALSAFG 1578
F A+ +++++ EDY+ S P LK M + L P T ++LALSA G
Sbjct: 627 FWDAQKTLKVLAEEDYFKESKDDNKKESVLPPALKAMTSECDALSLTPKTGYELALSALG 686
Query: 1579 AIFWYLRDSLIDVDMLSMRNVTIYNSNSMENDQKKEKIDWNGKN---LILDGTALENLNI 1749
+YL+ L+D ++ SM N Y +E +Q + K ++LDG L NL I
Sbjct: 687 GCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGGASCFFAKTNQRMVLDGVTLANLEI 746
Query: 1750 VPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASS 1926
+ N +L ++ C TPFG+RLL+ W+ P C+P + R A++ L+ A S
Sbjct: 747 LQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLCNPSSIGDRLDALEDLMG--APS 804
Query: 1927 FMTTATATLKKIPDLDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAID 2106
+ T LKK+PDL+RLL KIH++G + + HPDSRAI ++ + +++KIA+ LAA++
Sbjct: 805 QTSEVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDSRAILYEEVVYSKRKIADFLAALE 864
Query: 2107 GFKLCNKLRKEYIKVQ-------KXXXXXXXXXXXXXNEQEM-EEVDENIYFFEKMFDRS 2262
GFK+ KE + + K NE + ++ + ++ FD
Sbjct: 865 GFKVM----KEIVSIMEPVGEGLKSKLLRQVVLLKTENEDGLFPDLSPELKRWDTAFDHQ 920
Query: 2263 TAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYKDSVAKKYSC-SIKFVDSGKVKYLL 2439
A G I P AG D EYD+ALN +KE +L DY D K+ C ++ + +G+ +Y L
Sbjct: 921 KARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKKRLGCKNLSYWGTGRNRYQL 980
Query: 2440 EMPENTKVSS---SFELKSRRKGFIRYSTPDSEQLVAALDAVEKEKSKLGDDATRRVFEQ 2610
E+PE+ S +E++S +KG+ RYST D E++ + L + E ++ D RR+F
Sbjct: 981 EVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQSWEDKRDAALKDCMRRLFYN 1040
Query: 2611 FGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFEMCMPEF----DFNATDPYLIVDKGVH 2778
F W V+ ++ DVL S+ +++S+ M PE D + + P+L + H
Sbjct: 1041 FDKNYKDWQTAVECMAVLDVLLSMCRYSQSADGSMARPEMALPGDGSYSAPFLDLRGSRH 1100
Query: 2779 PCLALQSRNEVTQT---TSFIANSTTMGA------------SEAAVMLLTGPNMGGKSTL 2913
PC VT+T FI N +G + A +L+TGPNMGGKSTL
Sbjct: 1101 PC--------VTKTFFGDDFIPNDIFIGCPGDEEEAQDDAKALAPCVLVTGPNMGGKSTL 1152
Query: 2914 MRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKN 3093
MRQ ++ ILA +G VPA S+RLTP+DR+FTR+GA+DRIM GESTFF+EL ET +L +
Sbjct: 1153 MRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILLH 1212
Query: 3094 ATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSICDSFTNHPNVR 3273
AT HSL+L+DELGRGT+T+DGTAIASAV++++S+ + CRT FSTHYHS+ + P VR
Sbjct: 1213 ATNHSLVLLDELGRGTATYDGTAIASAVVKELSEKICCRTLFSTHYHSLVEDHVQDPAVR 1272
Query: 3274 LAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQVVRNAYLESNK 3453
L HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA I V+++ + ++
Sbjct: 1273 LGHMACMVENE-CEDPSQETITFLYKFIRGACPKSYGFNAARLANIPEDVIQSGHKKARD 1331
Query: 3454 FASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI 3558
F + + + L A + +L +I+ +
Sbjct: 1332 FERSTVSLRIFKKLCSFAESPRAEREQLTTLIQTL 1366
>gi|33504503|ref|NP_878280.1| mutS homolog 6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 [Danio rerio]
Length = 1369
Score = 678 bits (1750), Expect = 0.0
Identities = 420/1115 (37%), Positives = 613/1115 (54%), Gaps = 50/1115 (4%)
Frame = +1
Query: 364 PESTPQSTPKRGGKKK-ISKPLLAENTPKSVKMAGKS-KKVIPDGEA-VSMAGVLDKMDK 534
PE+ P S K +K+ KP +++ P++ K A + V D ++ +S D D
Sbjct: 291 PETEPDSPVKPIKRKRPTEKPTKSKSKPETPKRAPAALPSVSTDAKSRLSAFSAPDNFDS 350
Query: 535 IMDGEGERKRIVEKTTGAKNKAVELEPAERFDHESFDFLKPDKIRDGFKRPMSDPEYDPK 714
G T G +DHE ++L+ K +D ++ SD YDP
Sbjct: 351 QSSANG--------TEGGSTV---------WDHEKLEWLQDGKRKDAQRKRQSDENYDPT 393
Query: 715 TLWVPPDFHQKQTPGHRQWWTMKSQHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRG 894
TL+VP DF + TPG R+WW +KS+ FDT+L +KVGKFYE YHMDAV V LN+ FM+G
Sbjct: 394 TLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYHMDAVIGVNELNLTFMKG 453
Query: 895 SYAHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQXXXXXXXXXXXXXXXX- 1071
++AH+GFPE +F+D L+ GYKVAR+EQTETP M+E R +
Sbjct: 454 TWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPNMMEARCKKLARPTKFDKVVKREVC 513
Query: 1072 --XSNGTRTYGVLDGVDLGSASSTLDPTAKHLLAIKEFHNPE-TGKSS-YGVCMIDTTTA 1239
+ GT+TY VLDG + S K+LL+IKE + TG YGVC IDT+
Sbjct: 514 RIITRGTQTYSVLDGAPSETQS-------KYLLSIKEKSEEDSTGHGHIYGVCFIDTSVG 566
Query: 1240 HIRIGQFEDDDYRSQLRTLLANVIVVQAIVERGSISSTTKSIINGILFSVPVEHLLPKKQ 1419
IGQF+DD + S+LRTL+A+ Q I E+G+ S T I I+ S E L Q
Sbjct: 567 RFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVASSLQEGLNAGSQ 626
Query: 1420 FMTAEDVVRIVSNEDYY------GSDASEWPEVLKGMLEDSSILP-KPSTDWQLALSAFG 1578
F A+ +++++ EDY+ AS P LK M + L P T ++LALSA G
Sbjct: 627 FWDAQKTLKVLAEEDYFKESKDDNKKASVLPPALKAMTPECDALSLTPKTGYELALSALG 686
Query: 1579 AIFWYLRDSLIDVDMLSMRNVTIYNSNSMENDQKKEKIDWNGKN---LILDGTALENLNI 1749
+YL+ L+D ++ SM N Y +E +Q + K ++LDG L NL I
Sbjct: 687 GCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGGASCFFAKTNQRMVLDGVTLANLEI 746
Query: 1750 VPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASS 1926
+ N +L ++ C TPFG+RLL+ W+ P C+ + R A++ L+ A S
Sbjct: 747 LQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLCNLSSIGDRLDALEDLMG--APS 804
Query: 1927 FMTTATATLKKIPDLDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAID 2106
+ T LKK+PDL+RLL KIH++G + + HPDSRAI ++ + +++KIA+ LAA++
Sbjct: 805 QTSEVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDSRAILYEEVVYSKRKIADFLAALE 864
Query: 2107 GFKLCNKLRKEYIKVQ-------KXXXXXXXXXXXXXNEQEM-EEVDENIYFFEKMFDRS 2262
GFK+ KE + + K NE + ++ + ++ FD
Sbjct: 865 GFKVM----KEIVSIMEPVGEDLKSKLLRQVVLLKTENEDGLFPDLSPELKRWDTAFDHQ 920
Query: 2263 TAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYKDSVAKKYSC-SIKFVDSGKVKYLL 2439
A G I P AG D EYD+ALN +KE +L DY D K+ C ++ + +G+ +Y L
Sbjct: 921 KARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKKRLGCKNLSYWGTGRNRYQL 980
Query: 2440 EMPENTKVSS---SFELKSRRKGFIRYSTPDSEQLVAALDAVEKEKSKLGDDATRRVFEQ 2610
E+PE+ S +E++S +KG+ RYST D E++ + L + E ++ D RR+F
Sbjct: 981 EVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQSWEDKRDAALKDCMRRLFYN 1040
Query: 2611 FGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFEMCMPEF----DFNATDPYLIVDKGVH 2778
F W V+ ++ DVL S+ +++S+ M PE D + + P+L + H
Sbjct: 1041 FDKNYKDWQTAVECMAVLDVLLSMCRYSQSADGSMARPEMALPGDGSYSAPFLDLRGSRH 1100
Query: 2779 PCLALQSRNEVTQT---TSFIANSTTMGA------------SEAAVMLLTGPNMGGKSTL 2913
PC VT+T FI N +G + A +L+TGPNMGGKSTL
Sbjct: 1101 PC--------VTKTFFGDDFIPNDIFIGCPGDEEEAQDDTKALAPCVLVTGPNMGGKSTL 1152
Query: 2914 MRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKN 3093
MRQ ++ ILA +G VPA S+RLTP+DR+FTR+GA+DRIM GESTFF+EL ET +L +
Sbjct: 1153 MRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILLH 1212
Query: 3094 ATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSICDSFTNHPNVR 3273
AT HSL+L+DELGRGT+T+DGTAIASAV++++S+ + CRT FSTHYHS+ + P VR
Sbjct: 1213 ATNHSLVLLDELGRGTATYDGTAIASAVVKELSEKICCRTLFSTHYHSLVEDHVQDPAVR 1272
Query: 3274 LAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQVVRNAYLESNK 3453
L HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA I V+++ + ++
Sbjct: 1273 LGHMACMVENE-CEDPSQETITFLYKFIRGACPKSYGFNAARLANIPEDVIQSGHKKARD 1331
Query: 3454 FASNLIIDPKIRHLVECARDDNFDVGELKRMIEAI 3558
F + + + L A + +L +I+ +
Sbjct: 1332 FERSTVSLRIFKKLCSFAESPRAEREQLTTLIQTL 1366
>gi|6754744|ref|NP_034960.1| mutS homolog 6 [Mus musculus]
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 [Mus musculus]
Length = 1358
Score = 676 bits (1744), Expect = 0.0
Identities = 388/975 (39%), Positives = 568/975 (57%), Gaps = 33/975 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LKP+K RD +R PE++P TL+VP +F TPG R+WW +KSQ+FD ++
Sbjct: 366 HETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIF 425
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDAV V L + FM+G++AH+GFPE A +F+D L+ GYKVAR+EQT
Sbjct: 426 YKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQT 485
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VLDG DP+ +
Sbjct: 486 ETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYSVLDG----------DPSENYS 535
Query: 1153 KHLLAIKEFHNPETGKSS-YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
++LL++KE +G + YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 536 RYLLSLKEKEEETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILF 595
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYY---GSDASEWPEV 1500
E+G++S+ TK+++ G L S E L+P QF A +R + Y+ G ++ P V
Sbjct: 596 EKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLPLV 655
Query: 1501 LKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNSME 1668
LKGM +S S+ P + +LALSA G I +YL+ LID ++LSM N Y +S+++
Sbjct: 656 LKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVS 715
Query: 1669 NDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWL 1845
+ + ++LD L NL I NG + +L ++ C TPFG+RLL+ WL
Sbjct: 716 TVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWL 775
Query: 1846 LQPTCDPKKLEQRQKAIKWLVS-PDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYRSE 2022
P C P + R A++ L++ PD +T LKK+PDL+RLL KIH +G +S+
Sbjct: 776 CAPLCSPSAISDRLDAVEDLMAVPDK---VTEVADLLKKLPDLERLLSKIHNVGSPLKSQ 832
Query: 2023 KHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQKXXXXXXXXXXXXXNE 2202
HPDSRAI ++ ++KKI + L+A++GFK+ K+ +V
Sbjct: 833 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQS 892
Query: 2203 QEME----EVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYK 2370
+ + ++ + ++ FD A K G I P AG D +YD+AL ++E L +Y
Sbjct: 893 KSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 952
Query: 2371 DSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQLV 2538
D + C SI + G+ +Y LE+PEN + +ELKS +KG RY T E+ +
Sbjct: 953 DKQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKL 1012
Query: 2539 AALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFEMC 2718
A L E+ + D RR+F F + W V+ ++ DVL LA +++ MC
Sbjct: 1013 ANLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMC 1072
Query: 2719 MPEFDFNATD--PYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAA-------V 2871
PE D P+L HPC+ + FI N +G E A
Sbjct: 1073 RPEIVLPGEDTHPFLEFKGSRHPCITKTFFGD-----DFIPNDILIGCEEEAEEHGKAYC 1127
Query: 2872 MLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGEST 3051
+L+TGPNMGGKSTL+RQ +LA++A +G VPA RLTP+DR+FTR+GA+DRIM GEST
Sbjct: 1128 VLVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGEST 1187
Query: 3052 FFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHY 3231
FF+EL ET +L++AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTHY
Sbjct: 1188 FFVELSETASILRHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHY 1247
Query: 3232 HSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGI 3411
HS+ + ++ VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA +
Sbjct: 1248 HSLVEDYSKSVCVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLANL 1306
Query: 3412 DHQVVRNAYLESNKF 3456
+V++ + ++ +F
Sbjct: 1307 PEEVIQKGHRKAREF 1321
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 676 bits (1744), Expect = 0.0
Identities = 388/975 (39%), Positives = 568/975 (57%), Gaps = 33/975 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LKP+K RD +R PE++P TL+VP +F TPG R+WW +KSQ+FD ++
Sbjct: 366 HETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIF 425
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDAV V L + FM+G++AH+GFPE A +F+D L+ GYKVAR+EQT
Sbjct: 426 YKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQT 485
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VLDG DP+ +
Sbjct: 486 ETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYSVLDG----------DPSENYS 535
Query: 1153 KHLLAIKEFHNPETGKSS-YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
++LL++KE +G + YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 536 RYLLSLKEKEEETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILF 595
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYY---GSDASEWPEV 1500
E+G++S+ TK+++ G L S E L+P QF A +R + Y+ G ++ P V
Sbjct: 596 EKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLPLV 655
Query: 1501 LKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNSME 1668
LKGM +S S+ P + +LALSA G I +YL+ LID ++LSM N Y +S+++
Sbjct: 656 LKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVS 715
Query: 1669 NDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWL 1845
+ + ++LD L NL I NG + +L ++ C TPFG+RLL+ WL
Sbjct: 716 TVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWL 775
Query: 1846 LQPTCDPKKLEQRQKAIKWLVS-PDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYRSE 2022
P C P + R A++ L++ PD +T LKK+PDL+RLL KIH +G +S+
Sbjct: 776 CAPLCSPSAISDRLDAVEDLMAVPDK---VTEVADLLKKLPDLERLLSKIHNVGSPLKSQ 832
Query: 2023 KHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQKXXXXXXXXXXXXXNE 2202
HPDSRAI ++ ++KKI + L+A++GFK+ K+ +V
Sbjct: 833 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQS 892
Query: 2203 QEME----EVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYK 2370
+ + ++ + ++ FD A K G I P AG D +YD+AL ++E L +Y
Sbjct: 893 KSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 952
Query: 2371 DSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQLV 2538
D + C SI + G+ +Y LE+PEN + +ELKS +KG RY T E+ +
Sbjct: 953 DKQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKL 1012
Query: 2539 AALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFEMC 2718
A L E+ + D RR+F F + W V+ ++ DVL LA +++ MC
Sbjct: 1013 ANLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMC 1072
Query: 2719 MPEFDFNATD--PYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAA-------V 2871
PE D P+L HPC+ + FI N +G E A
Sbjct: 1073 RPEIVLPGEDTHPFLEFKGSRHPCITKTFFGD-----DFIPNDILIGCEEEAEEHGKAYC 1127
Query: 2872 MLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGEST 3051
+L+TGPNMGGKSTL+RQ +LA++A +G VPA RLTP+DR+FTR+GA+DRIM GEST
Sbjct: 1128 VLVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGEST 1187
Query: 3052 FFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHY 3231
FF+EL ET +L++AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTHY
Sbjct: 1188 FFVELSETASILRHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHY 1247
Query: 3232 HSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGI 3411
HS+ + ++ VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA +
Sbjct: 1248 HSLVEDYSKSVCVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLANL 1306
Query: 3412 DHQVVRNAYLESNKF 3456
+V++ + ++ +F
Sbjct: 1307 PEEVIQKGHRKAREF 1321
>gi|2506881|sp|P54276|MSH6_MOUSE DNA mismatch repair protein MSH6
(MutS-alpha 160 kDa subunit) (G/T mismatch binding
protein) (GTBP) (GTMBP) (P160)
gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein
Length = 1358
Score = 671 bits (1732), Expect = 0.0
Identities = 386/974 (39%), Positives = 564/974 (57%), Gaps = 32/974 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LK K RD +R PE++P TL+VP +F TPG R+WW +KSQ+FD ++
Sbjct: 366 HETLEWLKQKKRRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIF 425
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDAV V L + FM+G++AH+GFPE A +F+D L+ GYKVAR+EQT
Sbjct: 426 YKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQT 485
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VLDG DP+ +
Sbjct: 486 ETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYSVLDG----------DPSENYS 535
Query: 1153 KHLLAIKEFHNPETGKSS-YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
++LL++KE +G + YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 536 RYLLSLKEKEEETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILF 595
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYY---GSDASEWPEV 1500
E+G++S+ TK+++ G L S E L+P QF A +R + Y+ G ++ P V
Sbjct: 596 EKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLPLV 655
Query: 1501 LKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNSME 1668
LKGM +S S+ P + +LALSA G I +YL+ LID ++LSM N Y +S+++
Sbjct: 656 LKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVS 715
Query: 1669 NDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWL 1845
+ + ++LD L NL I NG + +L ++ C TPFG+RLL+ WL
Sbjct: 716 TVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGNLLERLDTCHTPFGKRLLKQWL 775
Query: 1846 LQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYRSEK 2025
P C P + R A++ L++ +T LKK+PDL+RLL KIH +G +S+
Sbjct: 776 CAPLCSPSAISDRLDAVEDLMAVPYK--VTEVADLLKKLPDLERLLSKIHNVGSPLKSQN 833
Query: 2026 HPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQKXXXXXXXXXXXXXNEQ 2205
HPDSRAI ++ ++KKI + L+A++GFK+ K+ +V +
Sbjct: 834 HPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSK 893
Query: 2206 EME----EVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYKD 2373
+ ++ + ++ FD A K G I P AG D +YD+AL ++E L +Y D
Sbjct: 894 SPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLD 953
Query: 2374 SVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQLVA 2541
+ C SI + G+ +Y LE+PEN + +ELKS +KG RY T E+ +A
Sbjct: 954 KQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLA 1013
Query: 2542 ALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFEMCM 2721
L E+ + D RR+F F + W V+ ++ DVL LA +++ MC
Sbjct: 1014 NLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCR 1073
Query: 2722 PEFDFNATD--PYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASEAA-------VM 2874
PE D P+L HPC+ + FI N +G E A +
Sbjct: 1074 PEIVLPGEDTHPFLEFKGSRHPCITKTFFGD-----DFIPNDILIGCEEEAEEHGKAYCV 1128
Query: 2875 LLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTF 3054
L+TGPNMGGKSTL+RQ +LA++A +G VPA RLTP+DR+FTR+GA+DRIM GESTF
Sbjct: 1129 LVTGPNMGGKSTLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTF 1188
Query: 3055 FIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTHYH 3234
F+EL ET +L++AT HSL+LVDELGRGT+TFDGTAIASAV++++++ + CRT FSTHYH
Sbjct: 1189 FVELSETASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYH 1248
Query: 3235 SICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAGID 3414
S+ + ++ VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA +
Sbjct: 1249 SLVEDYSKSVCVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLANLP 1307
Query: 3415 HQVVRNAYLESNKF 3456
+V++ + ++ +F
Sbjct: 1308 EEVIQKGHRKAREF 1321
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 659 bits (1701), Expect = 0.0
Identities = 388/976 (39%), Positives = 562/976 (56%), Gaps = 34/976 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LK +K RD +R P++D TL+VP DF TPG R+WW +KSQ+FD ++
Sbjct: 367 HETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIC 426
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDA+ V L + FM+G++AH+GFPE A +++D L+ GYKVAR+EQT
Sbjct: 427 YKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQT 486
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VL+G DP+ +
Sbjct: 487 ETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEG----------DPSENYS 536
Query: 1153 KHLLAIKEFHNPETGKS-SYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
K+LL++KE +G + +YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 537 KYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLF 596
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYYGSDASEW-----P 1494
E+G++S TK+I+ L E L+P QF A +R + E+Y+ S+ P
Sbjct: 597 EKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLP 656
Query: 1495 EVLKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNS 1662
+VLKGM +S SI P +LALSA G +YL+ LID ++LSM N Y +S++
Sbjct: 657 QVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDT 716
Query: 1663 MENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRS 1839
+ + + ++LD L NL I NG + +L ++ C TPFG+RLL+
Sbjct: 717 VSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 776
Query: 1840 WLLQPTCDPKKLEQRQKAIKWL-VSPDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYR 2016
WL P C+ + R AI+ L V PD S LKK+PDL+RLL KIH +G +
Sbjct: 777 WLCAPLCNHYAINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERLLSKIHNVGSPLK 833
Query: 2017 SEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKL---RKEYIKVQKXXXXXXXXXX 2187
S+ HPDSRAI ++ ++KKI + L+A++GFK+ K+ +E K
Sbjct: 834 SQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISL 893
Query: 2188 XXXN-EQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELND 2364
N E ++ + ++ FD A K G I P AG D +YD+AL ++E L +
Sbjct: 894 QTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLE 953
Query: 2365 YKDSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQ 2532
Y + + C +I + G+ +Y LE+PEN + +ELKS +KG RY T E+
Sbjct: 954 YLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEK 1013
Query: 2533 LVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFE 2712
+A L E+ + D RR+F F W V+ ++ DVL LA +++
Sbjct: 1014 KLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGP 1073
Query: 2713 MCMPEFDF-NATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASE-------AA 2868
MC P T P+L + HPC+ + FI N +G E A
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGD-----DFIPNDILIGCEEEEQENGKAY 1128
Query: 2869 VMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGES 3048
+L+TGPNMGGKSTLMRQ +LA++A +G VPA RLTPIDR+FTR+GA+DRIM GES
Sbjct: 1129 CVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1188
Query: 3049 TFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTH 3228
TFF+EL ET +L +AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTH
Sbjct: 1189 TFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTH 1248
Query: 3229 YHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAG 3408
YHS+ + ++ + VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA
Sbjct: 1249 YHSLVEDYSQNVAVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLAN 1307
Query: 3409 IDHQVVRNAYLESNKF 3456
+ +V++ + ++ +F
Sbjct: 1308 LPEEVIQKGHRKAREF 1323
>gi|1709123|sp|P52701|MSH6_HUMAN DNA mismatch repair protein MSH6
(MutS-alpha 160 kDa subunit) (G/T mismatch binding
protein) (GTBP) (GTMBP) (p160)
gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 659 bits (1701), Expect = 0.0
Identities = 388/976 (39%), Positives = 562/976 (56%), Gaps = 34/976 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LK +K RD +R P++D TL+VP DF TPG R+WW +KSQ+FD ++
Sbjct: 367 HETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIC 426
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDA+ V L + FM+G++AH+GFPE A +++D L+ GYKVAR+EQT
Sbjct: 427 YKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQT 486
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VL+G DP+ +
Sbjct: 487 ETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEG----------DPSENYS 536
Query: 1153 KHLLAIKEFHNPETGKS-SYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
K+LL++KE +G + +YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 537 KYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLF 596
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYYGSDASEW-----P 1494
E+G++S TK+I+ L E L+P QF A +R + E+Y+ S+ P
Sbjct: 597 EKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLP 656
Query: 1495 EVLKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNS 1662
+VLKGM +S SI P +LALSA G +YL+ LID ++LSM N Y +S++
Sbjct: 657 QVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDT 716
Query: 1663 MENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRS 1839
+ + + ++LD L NL I NG + +L ++ C TPFG+RLL+
Sbjct: 717 VSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 776
Query: 1840 WLLQPTCDPKKLEQRQKAIKWL-VSPDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYR 2016
WL P C+ + R AI+ L V PD S LKK+PDL+RLL KIH +G +
Sbjct: 777 WLCAPLCNHYAINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERLLSKIHNVGSPLK 833
Query: 2017 SEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKL---RKEYIKVQKXXXXXXXXXX 2187
S+ HPDSRAI ++ ++KKI + L+A++GFK+ K+ +E K
Sbjct: 834 SQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISL 893
Query: 2188 XXXN-EQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELND 2364
N E ++ + ++ FD A K G I P AG D +YD+AL ++E L +
Sbjct: 894 QTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLE 953
Query: 2365 YKDSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQ 2532
Y + + C +I + G+ +Y LE+PEN + +ELKS +KG RY T E+
Sbjct: 954 YLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEK 1013
Query: 2533 LVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFE 2712
+A L E+ + D RR+F F W V+ ++ DVL LA +++
Sbjct: 1014 KLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGP 1073
Query: 2713 MCMPEFDF-NATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASE-------AA 2868
MC P T P+L + HPC+ + FI N +G E A
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGD-----DFIPNDILIGCEEEEQENGKAY 1128
Query: 2869 VMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGES 3048
+L+TGPNMGGKSTLMRQ +LA++A +G VPA RLTPIDR+FTR+GA+DRIM GES
Sbjct: 1129 CVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1188
Query: 3049 TFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTH 3228
TFF+EL ET +L +AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTH
Sbjct: 1189 TFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTH 1248
Query: 3229 YHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAG 3408
YHS+ + ++ + VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA
Sbjct: 1249 YHSLVEDYSQNVAVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLAN 1307
Query: 3409 IDHQVVRNAYLESNKF 3456
+ +V++ + ++ +F
Sbjct: 1308 LPEEVIQKGHRKAREF 1323
>gi|4504191|ref|NP_000170.1| mutS homolog 6; G/T mismatch-binding
protein; mutS (E. coli) homolog 6 [Homo sapiens]
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 [Homo sapiens]
Length = 1360
Score = 659 bits (1701), Expect = 0.0
Identities = 388/976 (39%), Positives = 562/976 (56%), Gaps = 34/976 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LK +K RD +R P++D TL+VP DF TPG R+WW +KSQ+FD ++
Sbjct: 367 HETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIC 426
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDA+ V L + FM+G++AH+GFPE A +++D L+ GYKVAR+EQT
Sbjct: 427 YKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQT 486
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VL+G DP+ +
Sbjct: 487 ETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEG----------DPSENYS 536
Query: 1153 KHLLAIKEFHNPETGKS-SYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
K+LL++KE +G + +YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 537 KYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLF 596
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYYGSDASEW-----P 1494
E+G++S TK+I+ L E L+P QF A +R + E+Y+ S+ P
Sbjct: 597 EKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLP 656
Query: 1495 EVLKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNS 1662
+VLKGM +S SI P +LALSA G +YL+ LID ++LSM N Y +S++
Sbjct: 657 QVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDT 716
Query: 1663 MENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRS 1839
+ + + ++LD L NL I NG + +L ++ C TPFG+RLL+
Sbjct: 717 VSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 776
Query: 1840 WLLQPTCDPKKLEQRQKAIKWL-VSPDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYR 2016
WL P C+ + R AI+ L V PD S LKK+PDL+RLL KIH +G +
Sbjct: 777 WLCAPLCNHYAINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERLLSKIHNVGSPLK 833
Query: 2017 SEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKL---RKEYIKVQKXXXXXXXXXX 2187
S+ HPDSRAI ++ ++KKI + L+A++GFK+ K+ +E K
Sbjct: 834 SQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISL 893
Query: 2188 XXXN-EQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELND 2364
N E ++ + ++ FD A K G I P AG D +YD+AL ++E L +
Sbjct: 894 QTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLE 953
Query: 2365 YKDSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQ 2532
Y + + C +I + G+ +Y LE+PEN + +ELKS +KG RY T E+
Sbjct: 954 YLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEK 1013
Query: 2533 LVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFE 2712
+A L E+ + D RR+F F W V+ ++ DVL LA +++
Sbjct: 1014 KLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGP 1073
Query: 2713 MCMPEFDF-NATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASE-------AA 2868
MC P T P+L + HPC+ + FI N +G E A
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGD-----DFIPNDILIGCEEEEQENGKAY 1128
Query: 2869 VMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGES 3048
+L+TGPNMGGKSTLMRQ +LA++A +G VPA RLTPIDR+FTR+GA+DRIM GES
Sbjct: 1129 CVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1188
Query: 3049 TFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTH 3228
TFF+EL ET +L +AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTH
Sbjct: 1189 TFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTH 1248
Query: 3229 YHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAG 3408
YHS+ + ++ + VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA
Sbjct: 1249 YHSLVEDYSQNVAVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLAN 1307
Query: 3409 IDHQVVRNAYLESNKF 3456
+ +V++ + ++ +F
Sbjct: 1308 LPEEVIQKGHRKAREF 1323
>gi|7512474|pir||JC5839 GTBP-N protein - human
gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 659 bits (1701), Expect = 0.0
Identities = 388/976 (39%), Positives = 562/976 (56%), Gaps = 34/976 (3%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LK +K RD +R P++D TL+VP DF TPG R+WW +KSQ+FD ++
Sbjct: 367 HETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIC 426
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDA+ V L + FM+G++AH+GFPE A +++D L+ GYKVAR+EQT
Sbjct: 427 YKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQT 486
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VL+G DP+ +
Sbjct: 487 ETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEG----------DPSENYS 536
Query: 1153 KHLLAIKEFHNPETGKS-SYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
K+LL++KE +G + +YGVC +DT+ IGQF DD + S+ RTL+A+ VQ +
Sbjct: 537 KYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLF 596
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYYGSDASEW-----P 1494
E+G++S TK+I+ L E L+P QF A +R + E+Y+ S+ P
Sbjct: 597 EKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLP 656
Query: 1495 EVLKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNS 1662
+VLKGM +S SI P +LALSA G +YL+ LID ++LSM N Y +S++
Sbjct: 657 QVLKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDT 716
Query: 1663 MENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRS 1839
+ + + ++LD L NL I NG + +L ++ C TPFG+RLL+
Sbjct: 717 VSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 776
Query: 1840 WLLQPTCDPKKLEQRQKAIKWL-VSPDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYR 2016
WL P C+ + R AI+ L V PD S LKK+PDL+RLL KIH +G +
Sbjct: 777 WLCAPLCNHYAINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERLLSKIHNVGSPLK 833
Query: 2017 SEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKL---RKEYIKVQKXXXXXXXXXX 2187
S+ HPDSRAI ++ ++KKI + L+A++GFK+ K+ +E K
Sbjct: 834 SQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISL 893
Query: 2188 XXXN-EQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELND 2364
N E ++ + ++ FD A K G I P AG D +YD+AL ++E L +
Sbjct: 894 QTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLE 953
Query: 2365 YKDSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQ 2532
Y + + C +I + G+ +Y LE+PEN + +ELKS +KG RY T E+
Sbjct: 954 YLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEK 1013
Query: 2533 LVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVLTSLALFAKSSPFE 2712
+A L E+ + D RR+F F W V+ ++ DVL LA +++
Sbjct: 1014 KLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGP 1073
Query: 2713 MCMPEFDF-NATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASE-------AA 2868
MC P T P+L + HPC+ + FI N +G E A
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGD-----DFIPNDILIGCEEEEQENGKAY 1128
Query: 2869 VMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGES 3048
+L+TGPNMGGKSTLMRQ +LA++A +G VPA RLTPIDR+FTR+GA+DRIM GES
Sbjct: 1129 CVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1188
Query: 3049 TFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKISDDLACRTFFSTH 3228
TFF+EL ET +L +AT HSL+LVDELGRGT+TFDGTAIA+AV++++++ + CRT FSTH
Sbjct: 1189 TFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTH 1248
Query: 3229 YHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICPKSYGFYAAKLAG 3408
YHS+ + ++ + VRL HM C+V+ E EDP+ E +TFLY+ G CPKSYGF AA+LA
Sbjct: 1249 YHSLVEDYSQNVAVRLGHMACMVENE-CEDPSQETITFLYKFIKGACPKSYGFNAARLAN 1307
Query: 3409 IDHQVVRNAYLESNKF 3456
+ +V++ + ++ +F
Sbjct: 1308 LPEEVIQKGHRKAREF 1323
>gi|34862150|ref|XP_345634.1| similar to mismatch repair protein MSH6
[Rattus norvegicus]
Length = 1541
Score = 647 bits (1669), Expect = 0.0
Identities = 383/988 (38%), Positives = 565/988 (56%), Gaps = 46/988 (4%)
Frame = +1
Query: 631 HESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHFDTILL 810
HE+ ++LKP+K RD +R P+Y+ TL+VP DF TPG R+WW KSQ+FD ++
Sbjct: 562 HETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPGMRRWWQFKSQNFDLVIF 621
Query: 811 FKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYKVARIEQT 990
+KVGKFYE YHMDAV V L + FM+G++AH+GFPE A +F+D L+ GYKVAR+EQT
Sbjct: 622 YKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQT 681
Query: 991 ETPQMLEERNQXXXXXXXXXXXXXXXX---XSNGTRTYGVLDGVDLGSASSTLDPT---A 1152
ETP+M+E R + + GT+TY VLDG DP+ +
Sbjct: 682 ETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYSVLDG----------DPSENYS 731
Query: 1153 KHLLAIKEFHNPETGKS-SYGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQAIV 1329
++LL++KE +G +YGVC +DT+ +GQF DD + S+LRTL+A+ VQ +
Sbjct: 732 RYLLSLKEKEEDSSGHMRAYGVCFVDTSLGKFFLGQFSDDRHCSRLRTLVAHYPPVQILF 791
Query: 1330 ERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVVRIVSNEDYY-GSDAS--EWPEV 1500
E+G++S+ TK+++ G L S E L+P QF A +R + Y+ G++ S E P V
Sbjct: 792 EKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNEGSGAELPPV 851
Query: 1501 LKGMLEDS-SILPKPSTDWQLALSAFGAIFWYLRDSLIDVDMLSMRNVTIY---NSNSME 1668
LK M +S S+ P + +L+LSA G +YL+ LID ++LSM N Y +S+ +
Sbjct: 852 LKAMTSESDSVGLTPGEESELSLSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDMVG 911
Query: 1669 NDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVINKCSTPFGRRLLRSWL 1845
+ + ++LD L NL I NG + +L ++ C TPFG+RLL+ WL
Sbjct: 912 TVKPGAVFTKASQRMVLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWL 971
Query: 1846 LQPTCDPKKLEQRQKAIKWLVS-PDASSFMTTATATLKKIPDLDRLLQKIHTIGLKYRSE 2022
P C P + R AI+ L++ PD + LKK+PDL+RLL KIH +G +S+
Sbjct: 972 CAPLCSPSAISDRLDAIEDLMAVPDK---VAEVADLLKKLPDLERLLSKIHNVGSPLKSQ 1028
Query: 2023 KHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKV----QKXXXXXXXXXXX 2190
HPD+RAI ++ ++KKI + L+A++GFK+ K+ + V +
Sbjct: 1029 NHPDTRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQT 1088
Query: 2191 XXNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRVKEALNELNDYK 2370
+ ++ + ++ FD A K G I P AG D +YD+AL ++E L +Y
Sbjct: 1089 KSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 1148
Query: 2371 DSVAKKYSC-SIKFVDSGKVKYLLEMPEN---TKVSSSFELKSRRKGFIRYSTPDSEQLV 2538
D + C +I + G+ +Y LE+PEN + +ELKS +KG RY T E+ +
Sbjct: 1149 DKQRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKKL 1208
Query: 2539 AALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVS------SFDVLTSLA----- 2685
+ L E+ + D RR+F F + W V+ + S V S A
Sbjct: 1209 SNLINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLGKAPSHPVCHSCASLDLT 1268
Query: 2686 --LFAKSSPFEMCMPEFDFNATD--PYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMG 2853
++++ MC P D P+L + HPC+ + FI N +G
Sbjct: 1269 VFIYSQGGDGPMCRPVLLLPGEDTHPFLELKGSRHPCITKTFFGD-----DFIPNDILIG 1323
Query: 2854 ASEAA-------VMLLTGPNMGGKSTLMRQTAVLAILAHIGSMVPAFSMRLTPIDRIFTR 3012
E A +L+TGPNMGGKSTL+RQ +LA++A +G VPA RLTP+DR+FTR
Sbjct: 1324 CEEDAEADGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQMGCYVPAELCRLTPVDRVFTR 1383
Query: 3013 IGANDRIMCGESTFFIELKETDIMLKNATKHSLLLVDELGRGTSTFDGTAIASAVLQKIS 3192
+GA+DRIM GESTFF+EL ET +L++AT HSL+LVDELGRGT+TFDGTAIASAV+++++
Sbjct: 1384 LGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELA 1443
Query: 3193 DDLACRTFFSTHYHSICDSFTNHPNVRLAHMKCVVDKENNEDPTMEDVTFLYELESGICP 3372
+ + CRT FSTHYHS+ + ++ + VRL HM C+V+ E EDP+ E +TFLY+ G CP
Sbjct: 1444 ETIKCRTLFSTHYHSLVEDYSKNVCVRLGHMACMVENE-CEDPSQETITFLYKFIKGACP 1502
Query: 3373 KSYGFYAAKLAGIDHQVVRNAYLESNKF 3456
KSYGF AA+LA + +V++ + ++ +F
Sbjct: 1503 KSYGFNAARLANLPEEVIQKGHRKAREF 1530