Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y48B6A_12
         (1134 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17537201|ref|NP_496966.1| mevalonate decarboxylase (41.5 kD) ...   700   0.0
gi|17537203|ref|NP_496967.1| mevalonate decarboxylase (2O512) [C...   578   e-163
gi|39591192|emb|CAE73245.1| Hypothetical protein CBG20661 [Caeno...   492   e-138
gi|50252009|dbj|BAD27942.1| putative mevalonate disphosphate dec...   245   1e-63
gi|16417950|gb|AAL18927.1| mevalonate disphosphate decarboxylase...   241   2e-62
gi|28571205|ref|NP_573068.3| CG8239-PA [Drosophila melanogaster]...   241   2e-62
gi|31196851|ref|XP_307373.1| ENSANGP00000013738 [Anopheles gambi...   236   9e-61
gi|47230341|emb|CAF99534.1| unnamed protein product [Tetraodon n...   233   5e-60
gi|15224931|ref|NP_181404.1| mevalonate diphosphate decarboxylas...   231   2e-59
gi|21593039|gb|AAM64988.1| mevalonate diphosphate decarboxylase ...   231   2e-59
gi|30584105|gb|AAP36301.1| Homo sapiens mevalonate (diphospho) d...   227   3e-58
gi|20149736|ref|NP_619597.1| mevalonate (diphospho) decarboxylas...   227   3e-58
gi|4505289|ref|NP_002452.1| diphosphomevalonate decarboxylase; m...   227   3e-58
gi|18410026|ref|NP_566995.1| mevalonate diphosphate decarboxylas...   226   8e-58
gi|19114939|ref|NP_594027.1| diphosphomevalonate decarboxylase [...   225   1e-57
gi|31242113|ref|XP_321487.1| ENSANGP00000018147 [Anopheles gambi...   225   2e-57
gi|26354448|dbj|BAC40852.1| unnamed protein product [Mus musculus]    224   2e-57
gi|23814095|sp|Q99JF5|ER19_MOUSE Diphosphomevalonate decarboxyla...   223   5e-57
gi|21593243|gb|AAM65192.1| diphosphomevalonate decarboxylase-lik...   223   5e-57
gi|49077992|ref|XP_402794.1| hypothetical protein UM05179.1 [Ust...   223   8e-57
gi|13592005|ref|NP_112324.1| mevalonate pyrophosphate decarboxyl...   222   1e-56
gi|11281655|pir||T47584 diphosphomevalonate decarboxylase (EC 4....   218   2e-55
gi|39645379|gb|AAH63907.1| LOC394871 protein [Xenopus tropicalis]     216   1e-54
gi|50256200|gb|EAL18927.1| hypothetical protein CNBI1880 [Crypto...   211   2e-53
gi|6324371|ref|NP_014441.1| involved in the polyisoprene biosynt...   210   6e-53
gi|6625790|gb|AAF19399.1| diphosphomevalonate decarboxylase MVD1...   209   7e-53
gi|50409853|ref|XP_456912.1| unnamed protein product [Debaryomyc...   207   4e-52
gi|50555265|ref|XP_505041.1| hypothetical protein [Yarrowia lipo...   206   1e-51
gi|38102992|gb|EAA49759.1| hypothetical protein MG09750.4 [Magna...   202   1e-50
gi|13786942|pdb|1FI4|A Chain A, The X-Ray Crystal Structure Of M...   202   2e-50
gi|50771155|ref|XP_423130.1| PREDICTED: similar to mevalonate py...   201   3e-50
gi|50311049|ref|XP_455548.1| unnamed protein product [Kluyveromy...   198   2e-49
gi|46137817|ref|XP_390600.1| hypothetical protein FG10424.1 [Gib...   196   6e-49
gi|50285813|ref|XP_445335.1| unnamed protein product [Candida gl...   194   2e-48
gi|49094180|ref|XP_408551.1| hypothetical protein AN4414.2 [Aspe...   191   2e-47
gi|32416734|ref|XP_328845.1| hypothetical protein [Neurospora cr...   191   3e-47
gi|46440756|gb|EAL00059.1| hypothetical protein CaO19.13524 [Can...   170   6e-41
gi|45200865|ref|NP_986435.1| AGL232Cp [Eremothecium gossypii] >g...   167   5e-40
gi|15899699|ref|NP_344304.1| Diphosphomevalonate decarboxylase, ...   160   5e-38
gi|23097681|ref|NP_691147.1| mevalonate diphosphate decarboxylas...   159   1e-37
gi|9937373|gb|AAG02431.1| mevalonate diphosphate decarboxylase [...   156   7e-37
gi|47093021|ref|ZP_00230800.1| diphosphomevalonate decarboxylase...   149   9e-35
gi|16799090|ref|NP_469358.1| similar to mevalonate diphosphate d...   149   9e-35
gi|46879500|gb|AAT02802.1| diphosphomevalonate decarboxylase [Li...   149   9e-35
gi|48121058|ref|XP_393230.1| similar to mevalonate pyrophosphate...   149   1e-34
gi|27467280|ref|NP_763917.1| mevalonate diphosphate decarboxylas...   149   2e-34
gi|21282275|ref|NP_645363.1| mevalonate diphosphate decarboxylas...   148   2e-34
gi|15923581|ref|NP_371115.1| mevalonate diphosphate decarboxylas...   148   3e-34
gi|49482821|ref|YP_040045.1| mevalonate diphosphate decarboxylas...   147   6e-34
gi|16802059|ref|NP_463544.1| similar to mevalonate diphosphate d...   145   1e-33
gi|9937387|gb|AAG02441.1| mevalonate diphosphate decarboxylase [...   145   2e-33
gi|29375487|ref|NP_814641.1| mevalonate diphosphate decarboxylas...   142   1e-32
gi|48824994|ref|ZP_00286300.1| COG3407: Mevalonate pyrophosphate...   135   2e-30
gi|9937394|gb|AAG02446.1| mevalonate diphosphate decarboxylase [...   135   2e-30
gi|42519131|ref|NP_965061.1| mevalonate pyrophosphate decarboxyl...   132   1e-29
gi|23002258|ref|ZP_00045936.1| COG3407: Mevalonate pyrophosphate...   129   1e-28
gi|48870580|ref|ZP_00323301.1| COG3407: Mevalonate pyrophosphate...   129   2e-28
gi|20429112|emb|CAD24423.1| mevalonate diphosphate decarboxylase...   128   3e-28
gi|19074299|ref|NP_585805.1| MEVALONATE PYROPHOSPHATE DECARBOXYL...   125   2e-27
gi|15921219|ref|NP_376888.1| 257aa long hypothetical diphosphome...   124   3e-27
gi|9695271|dbj|BAB07791.1| diphosphomevalonate decarboxylase [St...   122   2e-26
gi|15212071|emb|CAC51371.1| mevalonate diphosphate decarboxylase...   120   4e-26
gi|50590617|ref|ZP_00331980.1| COG3407: Mevalonate pyrophosphate...   116   8e-25
gi|28378415|ref|NP_785307.1| diphosphomevalonate decarboxylase [...   114   3e-24
gi|29653945|ref|NP_819637.1| diphosphomevalonate decarboxylase [...   105   2e-21
gi|7544604|gb|AAA34506.2| ORF [Saccharomyces cerevisiae]              105   2e-21
gi|40882372|dbj|BAD07376.1| mevalonate diphosphate decarboxylase...   103   1e-20
gi|48865750|ref|ZP_00319608.1| COG3407: Mevalonate pyrophosphate...   101   3e-20
gi|24379381|ref|NP_721336.1| putative mevalonate diphosphate dec...   100   5e-20
gi|9937401|gb|AAG02451.1| mevalonate diphosphate decarboxylase [...    99   2e-19
gi|15674902|ref|NP_269076.1| mevalonate pyrophosphate decarboxyl...    99   2e-19
gi|19745945|ref|NP_607081.1| mevalonate pyrophosphate decarboxyl...    98   3e-19
gi|15902383|ref|NP_357933.1| diphosphomevalonate decarboxylase [...    98   4e-19
gi|25011437|ref|NP_735832.1| Unknown [Streptococcus agalactiae N...    97   7e-19
gi|22537472|ref|NP_688323.1| diphosphomevalonate decarboxylase [...    97   9e-19
gi|15900305|ref|NP_344909.1| diphosphomevalonate decarboxylase [...    95   3e-18
gi|9937408|gb|AAG02456.1| mevalonate diphosphate decarboxylase [...    95   3e-18
gi|15672387|ref|NP_266561.1| diphosphomevalonate decarboxylase [...    89   1e-16
gi|23023534|ref|ZP_00062768.1| COG3407: Mevalonate pyrophosphate...    88   4e-16
gi|29248368|gb|EAA39903.1| GLP_479_14176_13169 [Giardia lamblia ...    84   8e-15
gi|9711347|dbj|BAB07818.1| mevalonate diphosphate decaroboxylase...    82   3e-14
gi|21910132|ref|NP_664400.1| mevalonate diphosphate decarboxylas...    79   3e-13
gi|15595031|ref|NP_212820.1| mevalonate pyrophosphate decarboxyl...    74   6e-12
gi|42523132|ref|NP_968512.1| Diphosphomevalonate decarboxylase [...    70   1e-10
gi|15789800|ref|NP_279624.1| diphosphomevalonate decarboxylase; ...    60   9e-08
gi|21328240|gb|AAM48487.1| putative diphosphomevalonate decarbox...    56   2e-06
gi|37782408|gb|AAP34450.1| FP17780 [Homo sapiens]                      55   3e-06
gi|42516841|emb|CAD92043.1| putative diphosphomevalonate decarbo...    51   6e-05
gi|23025535|ref|ZP_00064551.1| COG3407: Mevalonate pyrophosphate...    44   0.007
gi|42516839|emb|CAD92042.1| putative diphosphomevalonate decarbo...    43   0.012
gi|22971403|ref|ZP_00018364.1| hypothetical protein [Chloroflexu...    39   0.29
gi|46440755|gb|EAL00058.1| hypothetical protein CaO19.13523 [Can...    37   1.1
gi|46435095|gb|EAK94485.1| hypothetical protein CaO19.780 [Candi...    35   4.2
gi|17531593|ref|NP_496224.1| putative cytoplasmic protein, with ...    34   5.5
gi|901966|gb|AAA70026.1| envelope glycoprotein, C2-V3 region           34   5.5
gi|39590950|emb|CAE58730.1| Hypothetical protein CBG01916 [Caeno...    34   7.2
gi|17533041|ref|NP_495709.1| zinc finger protein REF-2 family me...    33   9.3


>gi|17537201|ref|NP_496966.1| mevalonate decarboxylase (41.5 kD)
            (2O512) [Caenorhabditis elegans]
 gi|7509974|pir||T27010 diphosphomevalonate decarboxylase (EC
            4.1.1.33) Y48B6A.13b [similarity] - Caenorhabditis
            elegans
 gi|5824811|emb|CAB54454.1| Hypothetical protein Y48B6A.13b
            [Caenorhabditis elegans]
          Length = 377

 Score =  700 bits (1807), Expect = 0.0
 Identities = 354/377 (93%), Positives = 354/377 (93%)
 Frame = -1

Query: 1134 MSQDDGAAEAEATVRVPMNIALVKYWGKRDDLLILPLNDSISLTVDRLTAETTIRMVPGV 955
            MSQDDGAAEAEATVRVPMNIALVKYWGKRDDLLILPLNDSISLTVDRLTAETTIRMVPGV
Sbjct: 1    MSQDDGAAEAEATVRVPMNIALVKYWGKRDDLLILPLNDSISLTVDRLTAETTIRMVPGV 60

Query: 954  GKHTVEINGKSVELSSNKRYQTVFDEALRLQRKRKEAEASSADSNGNDPPPIFYHFHVTS 775
            GKHTVEINGKSVELSSNKRYQTVFDEALRLQRKRKEAEASSADSNGNDPPPIFYHFHVTS
Sbjct: 61   GKHTVEINGKSVELSSNKRYQTVFDEALRLQRKRKEAEASSADSNGNDPPPIFYHFHVTS 120

Query: 774  TTNFPVXXXXXXXXXXXXXXXXXXXXXXXLDDSQANRLARIGSGSACRSMYGGLVHWRKG 595
            TTNFPV                       LDDSQANRLARIGSGSACRSMYGGLVHWRKG
Sbjct: 121  TTNFPVAAGLASSAAGFAAIALAIQRILRLDDSQANRLARIGSGSACRSMYGGLVHWRKG 180

Query: 594  EMDDGSDCLAVRTEAAANWEDLYCIILVFDDGRKKVGSSEGMRRSRETSQLLKHRIESIV 415
            EMDDGSDCLAVRTEAAANWEDLYCIILVFDDGRKKVGSSEGMRRSRETSQLLKHRIESIV
Sbjct: 181  EMDDGSDCLAVRTEAAANWEDLYCIILVFDDGRKKVGSSEGMRRSRETSQLLKHRIESIV 240

Query: 414  PQRIQQIQEAYTSRNFEQLARVIMADSNQFHAVCMDSTPPIRYLNEASWQLIDTVEEFNI 235
            PQRIQQIQEAYTSRNFEQLARVIMADSNQFHAVCMDSTPPIRYLNEASWQLIDTVEEFNI
Sbjct: 241  PQRIQQIQEAYTSRNFEQLARVIMADSNQFHAVCMDSTPPIRYLNEASWQLIDTVEEFNI 300

Query: 234  GGIRAAYTFDAGPNACVIVQKENASQFLKAVLQTIQVPSEDLQVIGKELAEQFDVPAEPT 55
            GGIRAAYTFDAGPNACVIVQKENASQFLKAVLQTIQVPSEDLQVIGKELAEQFDVPAEPT
Sbjct: 301  GGIRAAYTFDAGPNACVIVQKENASQFLKAVLQTIQVPSEDLQVIGKELAEQFDVPAEPT 360

Query: 54   TKCSKLIMSPMGGGPQE 4
            TKCSKLIMSPMGGGPQE
Sbjct: 361  TKCSKLIMSPMGGGPQE 377




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