Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y48E1B_13
(750 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17537265|ref|NP_496856.1| putative nuclear protein, with a co... 429 e-119
gi|39591203|emb|CAE73256.1| Hypothetical protein CBG20672 [Caeno... 159 8e-38
gi|17537523|ref|NP_497064.1| putative nuclear protein, with 2 co... 36 0.75
gi|7839162|ref|NP_058150.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839152|ref|NP_058140.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839197|ref|NP_058181.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|2120078|pir||S69866 TyB protein - yeast (Saccharomyces cerevi... 35 1.3
gi|6323694|ref|NP_013765.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839173|ref|NP_058160.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839185|ref|NP_058169.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839207|ref|NP_058191.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839199|ref|NP_058183.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|2120068|pir||S69983 TyB protein - yeast (Saccharomyces cerevi... 35 1.3
gi|6322487|ref|NP_012560.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|6323597|ref|NP_013668.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|2120057|pir||S69951 TyB protein - yeast (Saccharomyces cerevi... 35 1.3
gi|6323601|ref|NP_013672.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|1945315|emb|CAA97027.1| TY1B [Saccharomyces cerevisiae] >gnl|... 35 1.3
gi|6322489|ref|NP_012562.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|6686357|sp|P47100|YJZ9_YEAST Transposon Ty1 protein B >gnl|BL... 35 1.3
gi|7839164|ref|NP_058152.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|6320985|ref|NP_011064.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839209|ref|NP_058193.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|7839171|ref|NP_058158.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|6686356|sp|P47098|YJZ7_YEAST Transposon Ty1 protein B >gnl|BL... 35 1.3
gi|7839205|ref|NP_058189.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|20336767|ref|NP_620387.1| TyB Gag-Pol protein; proteolyticall... 35 1.3
gi|808856|gb|AAA66938.1| Base 2095 is the position of the first ... 35 1.3
gi|663250|emb|CAA88158.1| TyB protein - yeast transposon Ty1-H3 ... 35 1.3
gi|7839160|ref|NP_058148.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|83589|pir||B22671 TyB protein - yeast (Saccharomyces cerevisi... 35 1.3
gi|2499832|sp|Q04711|YME4_YEAST Transposon Ty1 protein B >gnl|BL... 35 1.3
gi|1122342|emb|CAA92360.1| unknown [Saccharomyces cerevisiae] >g... 35 1.3
gi|1326009|emb|CAA87673.1| TYB protein [Saccharomyces cerevisiae] 35 1.3
gi|2499834|sp|Q04670|YMU0_YEAST Transposon Ty1 protein B >gnl|BL... 35 1.3
gi|2499831|sp|Q03434|YMD9_YEAST Transposon Ty1 protein B >gnl|BL... 35 1.3
gi|101398|pir||B28097 TyB protein - yeast (Saccharomyces cerevis... 35 1.3
gi|6319323|ref|NP_009406.1| TyB Gag-Pol protein; proteolytically... 35 1.3
gi|101394|pir||B22999 TyB protein - yeast (Saccharomyces cerevis... 35 2.2
gi|14915682|dbj|BAB62098.1| fibronectin-binding protein [Strepto... 34 2.8
gi|38640380|ref|NP_944303.1| conserved phage mega protein [Burkh... 34 2.8
gi|46123837|ref|XP_386472.1| hypothetical protein FG06296.1 [Gib... 34 2.8
gi|17541740|ref|NP_499883.1| component of oligomeric golgi compl... 34 3.7
gi|31206661|ref|XP_312297.1| ENSANGP00000021083 [Anopheles gambi... 34 3.7
gi|32414995|ref|XP_327977.1| predicted protein [Neurospora crass... 34 3.7
gi|32563639|ref|NP_871800.1| HMG-I and HMG-Y DNA-binding domain ... 34 3.7
gi|32403484|ref|XP_322355.1| hypothetical protein [Neurospora cr... 33 6.3
gi|50255022|gb|EAL17762.1| hypothetical protein CNBL2750 [Crypto... 33 6.3
gi|31217171|ref|XP_316376.1| ENSANGP00000013054 [Anopheles gambi... 33 6.3
gi|48766410|ref|ZP_00270960.1| COG4953: Membrane carboxypeptidas... 33 6.3
gi|38103658|gb|EAA50334.1| hypothetical protein MG04093.4 [Magna... 33 6.3
>gi|17537265|ref|NP_496856.1| putative nuclear protein, with a
coiled coil domain (26.8 kD) (2N887) [Caenorhabditis
elegans]
gi|7510011|pir||T27019 hypothetical protein Y48E1B.12 -
Caenorhabditis elegans
gi|3925260|emb|CAB07696.1| Hypothetical protein Y48E1B.12
[Caenorhabditis elegans]
Length = 249
Score = 429 bits (1103), Expect = e-119
Identities = 221/249 (88%), Positives = 221/249 (88%)
Frame = +1
Query: 1 MPPRKIKKDPAVVAMADTLETRVKDLLEEYKKKLREVALQTAKAESDRIIATIKPKYRDM 180
MPPRKIKKDPAVVAMADTLETRVKDLLEEYKKKLREVALQTAKAESDRIIATIKPKYRDM
Sbjct: 1 MPPRKIKKDPAVVAMADTLETRVKDLLEEYKKKLREVALQTAKAESDRIIATIKPKYRDM 60
Query: 181 PIMEFLASPPDDFYIXXXXXXXXXXAAVAVKQELPSEPDMEIDDAAAAQKTSIPIGQNSG 360
PIMEFLASPPDDFYI AAVAVKQELPSEPDMEIDDAAAAQKTSIPIGQNSG
Sbjct: 61 PIMEFLASPPDDFYIESGEEEEEGEAAVAVKQELPSEPDMEIDDAAAAQKTSIPIGQNSG 120
Query: 361 RNTVQVKQEPEIDDDAAHETSIPIAPSGQNSGRNTAADEHRRNEIITPAGQVLPLPTLQP 540
RNTVQVKQEPEIDDDAAHETSIPIAPSGQNSGRNTAADEHRRNEIITPAGQVLPLPTLQP
Sbjct: 121 RNTVQVKQEPEIDDDAAHETSIPIAPSGQNSGRNTAADEHRRNEIITPAGQVLPLPTLQP 180
Query: 541 EKPFRAPHVDEEIAFSVNGSPLVLAGRTTATAAGKENRXXXXXXXXXXXXXXXXXXPLQP 720
EKPFRAPHVDEEIAFSVNGSPLVLAGRTTATAAGKENR PLQP
Sbjct: 181 EKPFRAPHVDEEIAFSVNGSPLVLAGRTTATAAGKENRKKSKKSGAASKKAAAAAGPLQP 240
Query: 721 ETENAGTSV 747
ETENAGTSV
Sbjct: 241 ETENAGTSV 249