Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y51B9A_6
         (897 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17537323|ref|NP_496007.1| putative protein (32.9 kD) (2J696) ...   527   e-148
gi|7452557|pir||T16088 hypothetical protein F18C5.4 - Caenorhabd...   446   e-140
gi|32565488|ref|NP_495325.2| putative protein (2G854) [Caenorhab...   446   e-140
gi|39597118|emb|CAE59345.1| Hypothetical protein CBG02690 [Caeno...   399   e-119
gi|17506569|ref|NP_492294.1| putative nuclear protein (1J20) [Ca...    36   1.0
gi|2104785|gb|AAB57835.1| 9ORF binding protein 1 [Mus musculus]        35   1.7
gi|17536293|ref|NP_496069.1| putative nuclear protein (2J901) [C...    34   3.9
gi|49077854|ref|XP_402740.1| hypothetical protein UM05125.1 [Ust...    34   5.0
gi|47205609|emb|CAF93575.1| unnamed protein product [Tetraodon n...    34   5.0
gi|4321811|gb|AAD15834.1| variant 2 major surface glycoprotein [...    33   8.6


>gi|17537323|ref|NP_496007.1| putative protein (32.9 kD) (2J696)
           [Caenorhabditis elegans]
 gi|7510116|pir||T27090 hypothetical protein Y51B9A.3 -
           Caenorhabditis elegans
 gi|3881068|emb|CAA19539.1| Hypothetical protein Y51B9A.3
           [Caenorhabditis elegans]
          Length = 298

 Score =  527 bits (1357), Expect = e-148
 Identities = 274/298 (91%), Positives = 274/298 (91%)
 Frame = -1

Query: 897 MTTNNNSFHVKGKEEVQFERKNVVVACDVVNGKIIYVDVSSQLMGVLFAGDEILNVNGET 718
           MTTNNNSFHVKGKEEVQFERKNVVVACDVVNGKIIYVDVSSQLMGVLFAGDEILNVNGET
Sbjct: 1   MTTNNNSFHVKGKEEVQFERKNVVVACDVVNGKIIYVDVSSQLMGVLFAGDEILNVNGET 60

Query: 717 NIKTTADFIRAISAKLPGKVTIEFMRDDHCLVTEKPLPPRRPNTQMVELTFTYRGGAATG 538
           NIKTTADFIRAISAKLPGKVTIEFMRDDHCLVTEKPLPPRRPNTQMVELTFTYRGGAATG
Sbjct: 61  NIKTTADFIRAISAKLPGKVTIEFMRDDHCLVTEKPLPPRRPNTQMVELTFTYRGGAATG 120

Query: 537 IIIHRMAVDPKTVTISMVQSASNACHYVKGGDILVKVNDIYVLDRDSARKLLYASVNNTK 358
           IIIHRMAVDPKTVTISMVQSASNACHYVKGGDILVKVNDIYVLDRDSARKLLYASVNNTK
Sbjct: 121 IIIHRMAVDPKTVTISMVQSASNACHYVKGGDILVKVNDIYVLDRDSARKLLYASVNNTK 180

Query: 357 TVRLTLERSTNTXXXXXXXXXXXXAQSTAVGVKKAGNSVMLPPPKPPQGKANKQFDVLLP 178
           TVRLTLERSTNT            AQSTAVGVKKAGNSVMLPPPKPPQGKANKQFDVLLP
Sbjct: 181 TVRLTLERSTNTDPLGPAPLPPDGAQSTAVGVKKAGNSVMLPPPKPPQGKANKQFDVLLP 240

Query: 177 SDVLEIMKTNKISTRNRARILHVLSNXXXXXXXXXXXXPCHRSLPQKFVSHTFRLRSP 4
           SDVLEIMKTNKISTRNRARILHVLSN            PCHRSLPQKFVSHTFRLRSP
Sbjct: 241 SDVLEIMKTNKISTRNRARILHVLSNQPLHQLQLQFQPPCHRSLPQKFVSHTFRLRSP 298




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