Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y55B1BR_2
(2223 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17556240|ref|NP_497199.1| putative protein (81.4 kD) (3B57) [... 1145 0.0
gi|39588949|emb|CAE69579.1| Hypothetical protein CBG15796 [Caeno... 429 e-118
gi|17556238|ref|NP_497200.1| predicted CDS, putative protein (3B... 240 1e-61
gi|39588864|emb|CAE69494.1| Hypothetical protein CBG15700 [Caeno... 187 1e-45
gi|9631611|ref|NP_048390.1| Arg-rich protein [Paramecium bursari... 39 0.53
gi|3024125|sp|Q60524|MDM2_MESAU Ubiquitin-protein ligase E3 Mdm2... 37 2.6
gi|28828101|gb|AAO50784.1| similar to nucleolin, putative; prote... 37 2.6
gi|24660328|ref|NP_729284.1| CG32377-PA [Drosophila melanogaster... 37 2.6
gi|11359857|pir||T50652 AP-3 complex beta3A chain [imported] - h... 36 4.5
gi|45188174|ref|NP_984397.1| ADR300Cp [Eremothecium gossypii] >g... 35 5.8
gi|50728314|ref|XP_416084.1| PREDICTED: similar to Ubiquitin-pro... 35 5.8
gi|17554538|ref|NP_497857.1| putative nuclear protein, with a co... 35 5.8
gi|47226898|emb|CAG05790.1| unnamed protein product [Tetraodon n... 35 9.9
gi|26339338|dbj|BAC33340.1| unnamed protein product [Mus musculus] 35 9.9
gi|38082073|ref|XP_196170.3| similar to cask-interacting protein... 35 9.9
gi|26340714|dbj|BAC34019.1| unnamed protein product [Mus musculus] 35 9.9
gi|37360318|dbj|BAC98137.1| mKIAA1306 protein [Mus musculus] 35 9.9
gi|18093104|ref|NP_542421.1| cask-interacting protein 1 [Rattus ... 35 9.9
gi|17553930|ref|NP_498633.1| high Mobility Group protein (78.6 k... 35 9.9
>gi|17556240|ref|NP_497199.1| putative protein (81.4 kD) (3B57)
[Caenorhabditis elegans]
gi|15150695|gb|AAK85502.1| Hypothetical protein Y55B1BR.2
[Caenorhabditis elegans]
Length = 740
Score = 1145 bits (2962), Expect = 0.0
Identities = 598/740 (80%), Positives = 598/740 (80%)
Frame = +1
Query: 1 MEEDSREDDFNGKIRRSLCEWLGPFEEFHDRVAKNQQTSRHGLIRSKMKPRPSPFVTLQA 180
MEEDSREDDFNGKIRRSLCEWLGPFEEFHDRVAKNQQTSRHGLIRSKMKPRPSPFVTLQA
Sbjct: 1 MEEDSREDDFNGKIRRSLCEWLGPFEEFHDRVAKNQQTSRHGLIRSKMKPRPSPFVTLQA 60
Query: 181 XXXXXXXXXXXXXALQSMKNLVDERITEITHHEFADLKKGMNNVKSSATSSTDKKRKIGE 360
ALQSMKNLVDERITEITHHEFADLKKGMNNVKSSATSSTDKKRKIGE
Sbjct: 61 PPHESPSHVPVHVALQSMKNLVDERITEITHHEFADLKKGMNNVKSSATSSTDKKRKIGE 120
Query: 361 DEDSQIEVKRKKESRNYIPPSTPDSGTHSTESDMIEEPNSDEVAAMLSIMKTLDTPKLSP 540
DEDSQIEVKRKKESRNYIPPSTPDSGTHSTESDMIEEPNSDEVAAMLSIMKTLDTPKLSP
Sbjct: 121 DEDSQIEVKRKKESRNYIPPSTPDSGTHSTESDMIEEPNSDEVAAMLSIMKTLDTPKLSP 180
Query: 541 LPKDFKVVCKEDEQPGPXXXXXXXXXXXXXXXXXXXXTPEPKLLGTLRIKALKPERVQKL 720
LPKDFKVVCKEDEQPGP TPEPKLLGTLRIKALKPERVQKL
Sbjct: 181 LPKDFKVVCKEDEQPGPSSSKFPSDSSVSAASTSRESTPEPKLLGTLRIKALKPERVQKL 240
Query: 721 IELAKTRGKLTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDPIL 900
IELAKTRGKLTD RDPIL
Sbjct: 241 IELAKTRGKLTDVVEVEKKVVEKVVEKQEKRVLEPLPPPPRPPSVPAVPAVPTPSRDPIL 300
Query: 901 GPGSGSARNSPLPPQKPANKTVQSLQGLQGSSRTMSPSPRNIXXXXXXXXXXXXXALSTH 1080
GPGSGSARNSPLPPQKPANKTVQSLQGLQGSSRTMSPSPRNI ALSTH
Sbjct: 301 GPGSGSARNSPLPPQKPANKTVQSLQGLQGSSRTMSPSPRNIRSTTPSVPSRPPSALSTH 360
Query: 1081 XXXXXXXXXXXXXXXXXXXXXXVKPRFVCQWSHARLKKAQRVPFPDPSSTSTKTKGEFYH 1260
VKPRFVCQWSHARLKKAQRVPFPDPSSTSTKTKGEFYH
Sbjct: 361 SHVETEVAAVATTSAPAEASAAVKPRFVCQWSHARLKKAQRVPFPDPSSTSTKTKGEFYH 420
Query: 1261 ALAKDWKSKADNSKDRVTRPLNYMLSSVFFVLEAIWKADKERTTQSKMQCASIYRDTYEL 1440
ALAKDWKSKADNSKDRVTRPLNYMLSSVFFVLEAIWKADKERTTQSKMQCASIYRDTYEL
Sbjct: 421 ALAKDWKSKADNSKDRVTRPLNYMLSSVFFVLEAIWKADKERTTQSKMQCASIYRDTYEL 480
Query: 1441 LGVAVFQGVRDTDDSLAVHILPRVKVIGQVMLAVMQYQMYIFRSEQAIKTMSRLDMREVS 1620
LGVAVFQGVRDTDDSLAVHILPRVKVIGQVMLAVMQYQMYIFRSEQAIKTMSRLDMREVS
Sbjct: 481 LGVAVFQGVRDTDDSLAVHILPRVKVIGQVMLAVMQYQMYIFRSEQAIKTMSRLDMREVS 540
Query: 1621 ESIDIRPVXXXXXXXXXXXQHLTVPTNKAVTSVAHXXXXXXXXXXXXXXXXXXXXVIPWI 1800
ESIDIRPV QHLTVPTNKAVTSVAH VIPWI
Sbjct: 541 ESIDIRPVSRASDSSSVHSQHLTVPTNKAVTSVAHGTPKPSPSAGSTPSGPTGAPVIPWI 600
Query: 1801 ASIQACQNMVSMPQIVYDAYKSQLKTANGLMLASRYWEDSKTLSNIIDSGTFVKDVESIV 1980
ASIQACQNMVSMPQIVYDAYKSQLKTANGLMLASRYWEDSKTLSNIIDSGTFVKDVESIV
Sbjct: 601 ASIQACQNMVSMPQIVYDAYKSQLKTANGLMLASRYWEDSKTLSNIIDSGTFVKDVESIV 660
Query: 1981 GKSISMDMQFADLATFVLTAVGSLKAEYEEEQKQPAKPILAKVKKGLDLAIRTGTFHSDR 2160
GKSISMDMQFADLATFVLTAVGSLKAEYEEEQKQPAKPILAKVKKGLDLAIRTGTFHSDR
Sbjct: 661 GKSISMDMQFADLATFVLTAVGSLKAEYEEEQKQPAKPILAKVKKGLDLAIRTGTFHSDR 720
Query: 2161 PPPVHRPSNNTPDGKARRKQ 2220
PPPVHRPSNNTPDGKARRKQ
Sbjct: 721 PPPVHRPSNNTPDGKARRKQ 740