Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y57A10C_1
(581 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17537645|ref|NP_496635.1| putative protein family member, wit... 358 4e-98
gi|17534479|ref|NP_496634.1| putative protein family member, wit... 153 3e-36
gi|17556576|ref|NP_497391.1| predicted CDS, putative protein fam... 104 1e-21
gi|17556580|ref|NP_497389.1| predicted CDS, putative protein fam... 97 3e-19
gi|17556582|ref|NP_497388.1| predicted CDS, putative protein fam... 86 5e-16
gi|17556574|ref|NP_497392.1| predicted CDS, putative protein fam... 66 4e-10
gi|17531659|ref|NP_494081.1| predicted CDS, putative protein fam... 46 4e-04
gi|17531657|ref|NP_494078.1| putative endoplasmic reticulum prot... 39 0.053
gi|7495681|pir||T32338 hypothetical protein C08F1.5 - Caenorhabd... 37 0.26
gi|32565038|ref|NP_872027.1| putative protein family member, wit... 37 0.26
gi|49035199|gb|AAC68763.3| Hypothetical protein C40A11.8 [Caenor... 37 0.34
gi|7497244|pir||T33593 hypothetical protein C40A11.8 - Caenorhab... 37 0.34
gi|32565262|ref|NP_494200.2| putative protein family member, wit... 37 0.34
gi|17228052|ref|NP_484600.1| DegT/DnrJ/EryC1/StrS family [Nostoc... 34 2.2
gi|15639492|ref|NP_218942.1| rod shape-determining protein (rodA... 33 2.9
gi|23509014|ref|NP_701682.1| hypothetical protein [Plasmodium fa... 33 4.9
gi|18251017|gb|AAL65834.1| AgrC [Staphylococcus gallinarum] 32 6.5
gi|17533761|ref|NP_494072.1| putative endoplasmic reticulum prot... 32 8.4
gi|32566542|ref|NP_872112.1| predicted CDS, serpentine Receptor,... 32 8.4
>gi|17537645|ref|NP_496635.1| putative protein family member, with
at least 4 transmembrane domains (2M702) [Caenorhabditis
elegans]
gi|7510260|pir||T22883 hypothetical protein Y57A10C.1 -
Caenorhabditis elegans
gi|3877803|emb|CAB05753.1| Hypothetical protein Y57A10C.1
[Caenorhabditis elegans]
gi|3881147|emb|CAA19553.1| Hypothetical protein Y57A10C.1
[Caenorhabditis elegans]
Length = 239
Score = 358 bits (919), Expect = 4e-98
Identities = 178/193 (92%), Positives = 178/193 (92%)
Frame = -1
Query: 581 MGYVGRYLSVIYVFVLGNFINISYAWNITNHFGTDIAQVVPYIXXXXXXXXXXXXXXXIR 402
MGYVGRYLSVIYVFVLGNFINISYAWNITNHFGTDIAQVVPYI IR
Sbjct: 1 MGYVGRYLSVIYVFVLGNFINISYAWNITNHFGTDIAQVVPYIVAILPFLVAVPVVLFIR 60
Query: 401 RGKALPIQMFYFNQVIIAISAVFLSICLPMIMTPFPIRSLTTTLAVVILHCPPVYLLCCI 222
RGKALPIQMFYFNQVIIAISAVFLSICLPMIMTPFPIRSLTTTLAVVILHCPPVYLLCCI
Sbjct: 61 RGKALPIQMFYFNQVIIAISAVFLSICLPMIMTPFPIRSLTTTLAVVILHCPPVYLLCCI 120
Query: 221 SIEVWHLVSPIQYTFPKTTRLSNLQKFKISAFFFILETYYYYTCSRDLNHWPTNILILTA 42
SIEVWHLVSPIQYTFPKTTRLSNLQKFKISAFFFILETYYYYTCSRDLNHWPTNILILTA
Sbjct: 121 SIEVWHLVSPIQYTFPKTTRLSNLQKFKISAFFFILETYYYYTCSRDLNHWPTNILILTA 180
Query: 41 INIMTIPALFVAF 3
INIMTIPALFVAF
Sbjct: 181 INIMTIPALFVAF 193