Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y67D2_4
(2199 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17556386|ref|NP_497420.1| rna helicase (3C636) [Caenorhabditi... 1414 0.0
gi|39586111|emb|CAE69187.1| Hypothetical protein CBG15221 [Caeno... 1259 0.0
gi|20544129|ref|NP_068750.2| DEAH (Asp-Glu-Ala-His) box polypept... 722 0.0
gi|10439270|dbj|BAB15476.1| unnamed protein product [Homo sapiens] 719 0.0
gi|13397805|emb|CAC03449.3| dJ616B8.1 (Similar to pre-mRNA splic... 707 0.0
gi|21919420|ref|NP_665685.1| DEAH (Asp-Glu-Ala-His) box polypept... 702 0.0
gi|34860318|ref|XP_342566.1| similar to Probable ATP-dependent h... 689 0.0
gi|50758645|ref|XP_417352.1| PREDICTED: similar to Probable ATP-... 680 0.0
gi|49087010|ref|XP_405500.1| hypothetical protein AN1363.2 [Aspe... 574 e-162
gi|32413082|ref|XP_327021.1| hypothetical protein [Neurospora cr... 570 e-161
gi|50259863|gb|EAL22531.1| hypothetical protein CNBB4090 [Crypto... 568 e-160
gi|31201769|ref|XP_309832.1| ENSANGP00000018268 [Anopheles gambi... 564 e-159
gi|38108529|gb|EAA54533.1| hypothetical protein MG02518.4 [Magna... 564 e-159
gi|18415102|ref|NP_567558.1| RNA helicase, putative [Arabidopsis... 549 e-155
gi|19920696|ref|NP_608860.1| CG3225-PA [Drosophila melanogaster]... 541 e-152
gi|48716672|dbj|BAD23339.1| putative RNA helicase [Oryza sativa ... 533 e-150
gi|15231574|ref|NP_189288.1| ATP-dependent RNA helicase, putativ... 522 e-146
gi|1402875|emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] >... 522 e-146
gi|19114165|ref|NP_593253.1| putative pre-mRNA splicing factor A... 517 e-145
gi|50421073|ref|XP_459081.1| unnamed protein product [Debaryomyc... 516 e-144
gi|49074900|ref|XP_401551.1| hypothetical protein UM03936.1 [Ust... 514 e-144
gi|22329903|ref|NP_174527.2| RNA helicase, putative [Arabidopsis... 513 e-144
gi|41053341|ref|NP_956318.1| DEAH (Asp-Glu-Ala-His) box polypept... 513 e-144
gi|49094794|ref|XP_408858.1| hypothetical protein AN4721.2 [Aspe... 513 e-144
gi|48926654|gb|AAT47443.1| putative DEAD/DEAH RNA helicase [Oryz... 512 e-143
gi|50760719|ref|XP_418105.1| PREDICTED: similar to ATP-dependent... 511 e-143
gi|37654286|gb|AAQ96248.1| LRRGT00035 [Rattus norvegicus] 510 e-143
gi|4826690|ref|NP_004932.1| DEAH (Asp-Glu-Ala-His) box polypepti... 510 e-143
gi|27882034|gb|AAH44586.1| DHX8 protein [Homo sapiens] 510 e-143
gi|28704113|gb|AAH47327.1| DHX8 protein [Homo sapiens] 510 e-143
gi|34873791|ref|XP_213460.2| similar to ATP-dependent helicase D... 510 e-143
gi|15228730|ref|NP_191790.1| RNA helicase, putative [Arabidopsis... 508 e-142
gi|47223117|emb|CAG11252.1| unnamed protein product [Tetraodon n... 507 e-142
gi|50258188|gb|EAL20882.1| hypothetical protein CNBE2430 [Crypto... 507 e-142
gi|32411385|ref|XP_326173.1| hypothetical protein [Neurospora cr... 507 e-142
gi|31238776|ref|XP_319843.1| ENSANGP00000025250 [Anopheles gambi... 506 e-142
gi|49250365|gb|AAH74605.1| Unknown (protein for IMAGE:5308120) [... 506 e-142
gi|42569631|ref|NP_181077.2| RNA helicase, putative [Arabidopsis... 506 e-142
gi|31201101|ref|XP_309498.1| ENSANGP00000021966 [Anopheles gambi... 506 e-142
gi|19112729|ref|NP_595937.1| putative pre-mrna splicing factor r... 505 e-141
gi|34878065|ref|XP_214053.2| similar to Putative pre-mRNA splici... 504 e-141
gi|13124667|sp|O43143|DD15_HUMAN Putative pre-mRNA splicing fact... 504 e-141
gi|31563436|sp|O35286|DD15_MOUSE Putative pre-mRNA splicing fact... 504 e-141
gi|38104766|gb|EAA51285.1| hypothetical protein MG08807.4 [Magna... 504 e-141
gi|19921728|ref|NP_610269.1| CG11107-PA [Drosophila melanogaster... 504 e-141
gi|25408373|pir||D84767 probable pre-mRNA splicing factor RNA he... 503 e-141
gi|50258475|gb|EAL21164.1| hypothetical protein CNBD5400 [Crypto... 503 e-141
gi|17531507|ref|NP_497027.1| sex determining protein, Masculinis... 503 e-140
gi|6320850|ref|NP_010929.1| RNA-dependent ATPase/ATP-dependent R... 502 e-140
gi|46249858|gb|AAH68766.1| MGC81281 protein [Xenopus laevis] 501 e-140
gi|38424010|dbj|BAD01767.1| RNA helicase-like [Oryza sativa (jap... 501 e-140
gi|19862987|sp|Q10752|CC28_SCHPO Putative ATP-dependent RNA heli... 500 e-140
gi|25513513|pir||C86450 F5D14.27 protein - Arabidopsis thaliana ... 500 e-140
gi|15226549|ref|NP_182247.1| RNA helicase, putative [Arabidopsis... 498 e-139
gi|19921526|ref|NP_609946.1| CG10689-PA [Drosophila melanogaster... 498 e-139
gi|32398725|emb|CAD98685.1| pre-mRNA splicing factor ATP-depende... 498 e-139
gi|4557517|ref|NP_001349.1| DEAH (Asp-Glu-Ala-His) box polypepti... 498 e-139
gi|227517|prf||1705293A RNA helicase-like protein 498 e-139
gi|50550331|ref|XP_502638.1| hypothetical protein [Yarrowia lipo... 498 e-139
gi|39590709|emb|CAE65079.1| Hypothetical protein CBG09937 [Caeno... 496 e-139
gi|482230|pir||S41025 hypothetical protein K03H1.2 - Caenorhabdi... 496 e-138
gi|17554326|ref|NP_499212.1| sex determination DEAH box protein,... 496 e-138
gi|17535281|ref|NP_495019.1| sex determination DEAH box protein,... 496 e-138
gi|50546573|ref|XP_500756.1| hypothetical protein [Yarrowia lipo... 495 e-138
gi|41529171|dbj|BAD08431.1| DEAD/H (Asp-Glu-Ala-Asp/His) box pol... 495 e-138
gi|39591365|emb|CAE73419.1| Hypothetical protein CBG20862 [Caeno... 495 e-138
gi|47059171|ref|NP_997661.1| DEAH (Asp-Glu-Ala-His) box polypept... 494 e-138
gi|30794426|ref|NP_081263.1| DEAH (Asp-Glu-Ala-His) box polypept... 494 e-138
gi|23508097|ref|NP_700767.1| RNA helicase, putative [Plasmodium ... 493 e-138
gi|50413843|ref|XP_457324.1| unnamed protein product [Debaryomyc... 493 e-138
gi|48098531|ref|XP_392081.1| similar to ENSANGP00000021966 [Apis... 493 e-138
gi|40788293|dbj|BAA25503.2| KIAA0577 protein [Homo sapiens] 493 e-137
gi|46121247|ref|XP_385178.1| hypothetical protein FG05002.1 [Gib... 493 e-137
gi|15235842|ref|NP_193401.1| RNA helicase, putative [Arabidopsis... 493 e-137
gi|14250712|gb|AAH08825.1| DEAH (Asp-Glu-Ala-His) box polypeptid... 493 e-137
gi|26006959|sp|O60231|DD16_HUMAN Putative pre-mRNA splicing fact... 493 e-137
gi|39596868|emb|CAE59095.1| Hypothetical protein CBG02387 [Caeno... 493 e-137
gi|38502930|sp|Q7YR39|DD16_PANTR Putative pre-mRNA splicing fact... 493 e-137
gi|46443884|gb|EAL03163.1| hypothetical protein CaO19.4033 [Cand... 493 e-137
gi|49079422|ref|XP_403358.1| hypothetical protein UM05743.1 [Ust... 492 e-137
gi|20129977|ref|NP_610928.1| CG8241-PA [Drosophila melanogaster]... 492 e-137
gi|21428730|gb|AAM50025.1| SD07467p [Drosophila melanogaster] 492 e-137
gi|50289563|ref|XP_447213.1| unnamed protein product [Candida gl... 491 e-137
gi|50257575|gb|EAL20280.1| hypothetical protein CNBF0920 [Crypto... 491 e-137
gi|31199251|ref|XP_308573.1| ENSANGP00000015955 [Anopheles gambi... 491 e-137
gi|50304197|ref|XP_452048.1| unnamed protein product [Kluyveromy... 491 e-137
gi|47218748|emb|CAG02734.1| unnamed protein product [Tetraodon n... 491 e-137
gi|4503293|ref|NP_003578.1| DEAH (Asp-Glu-Ala-His) box polypepti... 490 e-137
gi|49068848|ref|XP_398713.1| hypothetical protein UM01098.1 [Ust... 489 e-136
gi|38106993|gb|EAA53224.1| hypothetical protein MG07501.4 [Magna... 488 e-136
gi|31220358|ref|XP_316912.1| ENSANGP00000011076 [Anopheles gambi... 488 e-136
gi|46137751|ref|XP_390567.1| conserved hypothetical protein [Gib... 488 e-136
gi|45185005|ref|NP_982723.1| AAR180Cp [Eremothecium gossypii] >g... 488 e-136
gi|49075482|ref|XP_401803.1| hypothetical protein UM04188.1 [Ust... 488 e-136
gi|49097008|ref|XP_409964.1| hypothetical protein AN5827.2 [Aspe... 487 e-136
gi|32422967|ref|XP_331927.1| hypothetical protein [Neurospora cr... 486 e-136
gi|46107130|ref|XP_380624.1| hypothetical protein FG00448.1 [Gib... 486 e-136
gi|6321318|ref|NP_011395.1| RNA helicase in the DEAH-box family,... 486 e-136
gi|49084084|ref|XP_404270.1| hypothetical protein AN0133.2 [Aspe... 485 e-135
gi|50303227|ref|XP_451555.1| unnamed protein product [Kluyveromy... 485 e-135
gi|46443567|gb|EAL02848.1| hypothetical protein CaO19.9255 [Cand... 484 e-135
gi|50758072|ref|XP_415747.1| PREDICTED: similar to DEAH (Asp-Glu... 483 e-135
gi|26330478|dbj|BAC28969.1| unnamed protein product [Mus musculus] 482 e-134
gi|20336302|ref|NP_064547.2| DEAH (Asp-Glu-Ala-His) box polypept... 482 e-134
gi|41053698|ref|NP_957170.1| hypothetical protein MGC63517 [Dani... 481 e-134
gi|45184843|ref|NP_982561.1| AAR020Wp [Eremothecium gossypii] >g... 481 e-134
gi|50259106|gb|EAL21783.1| hypothetical protein CNBC4850 [Crypto... 481 e-134
gi|46560585|ref|NP_848144.3| DEAH (Asp-Glu-Ala-His) box polypept... 481 e-134
gi|49093416|ref|XP_408169.1| hypothetical protein AN4032.2 [Aspe... 481 e-134
gi|50287699|ref|XP_446279.1| unnamed protein product [Candida gl... 480 e-134
gi|23613694|ref|NP_704715.1| ATP-dependant RNA helicase, putativ... 479 e-134
gi|40788918|dbj|BAA13213.2| KIAA0224 [Homo sapiens] 479 e-133
gi|47218463|emb|CAG03735.1| unnamed protein product [Tetraodon n... 479 e-133
gi|47230418|emb|CAF99611.1| unnamed protein product [Tetraodon n... 479 e-133
gi|3024898|sp|Q92620|PR16_HUMAN Pre-mRNA splicing factor ATP-dep... 479 e-133
gi|17999539|ref|NP_054722.2| DEAH (Asp-Glu-Ala-His) box polypept... 479 e-133
gi|30410010|ref|NP_848467.1| DEAH (Asp-Glu-Ala-His) box polypept... 479 e-133
gi|10438200|dbj|BAB15193.1| unnamed protein product [Homo sapiens] 478 e-133
gi|18859729|ref|NP_572947.1| CG32604-PA [Drosophila melanogaster... 478 e-133
gi|39584877|emb|CAE64301.1| Hypothetical protein CBG08977 [Caeno... 478 e-133
gi|25144243|ref|NP_741147.1| rna helicase (84.4 kD) (3G680) [Cae... 478 e-133
gi|32421753|ref|XP_331320.1| hypothetical protein [Neurospora cr... 478 e-133
gi|6681155|ref|NP_031865.1| DEAH (Asp-Glu-Ala-His) box polypepti... 476 e-133
gi|38103437|gb|EAA50134.1| hypothetical protein MG03893.4 [Magna... 476 e-133
gi|33146483|dbj|BAC79592.1| putative DEAH-box RNA helicase [Oryz... 476 e-132
gi|12044832|gb|AAG33228.2| DEAH-box RNA helicase [Chlamydomonas ... 475 e-132
gi|50546941|ref|XP_500940.1| hypothetical protein [Yarrowia lipo... 475 e-132
gi|7522524|pir||T39724 probable pre-mRNA splicing factor ATP-dep... 474 e-132
gi|48474990|sp|Q9P774|PR16_SCHPO Pre-mRNA splicing factor RNA he... 474 e-132
gi|34871080|ref|XP_213370.2| similar to DEAH (Asp-Glu-Ala-His) b... 474 e-132
gi|47207907|emb|CAF89868.1| unnamed protein product [Tetraodon n... 473 e-132
gi|11346341|pir||T46568 ATP-dependent RNA helicase cdc28 [simila... 473 e-131
gi|6322939|ref|NP_013012.1| RNA helicase in the DEAH-box family ... 471 e-131
gi|46138485|ref|XP_390933.1| conserved hypothetical protein [Gib... 471 e-131
gi|172270|gb|AAA34911.1| PRP16 peptide (put. helicase); putative 470 e-131
gi|50546395|ref|XP_500667.1| hypothetical protein [Yarrowia lipo... 469 e-130
gi|11346354|pir||T49573 probable ATP-binding protein PRP16 [impo... 469 e-130
gi|32415143|ref|XP_328051.1| probable ATP-binding protein PRP16 ... 469 e-130
gi|42562325|ref|NP_173961.3| RNA helicase, putative [Arabidopsis... 467 e-130
gi|50407806|ref|XP_456737.1| unnamed protein product [Debaryomyc... 466 e-129
gi|50302815|ref|XP_451344.1| unnamed protein product [Kluyveromy... 465 e-129
gi|50510419|dbj|BAD32195.1| mKIAA0224 protein [Mus musculus] 463 e-129
gi|23482170|gb|EAA18230.1| ATP-dependent RNA helicase-like prote... 463 e-129
gi|25513550|pir||D86390 T1K7.25 protein - Arabidopsis thaliana >... 462 e-128
gi|50288067|ref|XP_446462.1| unnamed protein product [Candida gl... 461 e-128
gi|32565154|ref|NP_741148.2| rna helicase (3G680) [Caenorhabditi... 460 e-128
gi|15239967|ref|NP_196805.1| RNA helicase, putative [Arabidopsis... 460 e-128
gi|39104622|dbj|BAC65596.4| mKIAA0577 protein [Mus musculus] 459 e-127
gi|34852059|ref|XP_215306.2| similar to DEAD/H (Asp-Glu-Ala-Asp/... 457 e-127
gi|45188097|ref|NP_984320.1| ADR224Wp [Eremothecium gossypii] >g... 456 e-127
gi|48094733|ref|XP_394254.1| similar to DEAH (Asp-Glu-Ala-His) b... 454 e-126
gi|46228687|gb|EAK89557.1| PRP43 involved in spliceosome disasse... 453 e-126
gi|19114003|ref|NP_593091.1| probable atp-dependent rna helicase... 449 e-124
gi|422052|pir||S35546 ATP-dependent RNA helicase - fission yeast... 449 e-124
gi|34851735|ref|XP_238048.2| similar to RIKEN cDNA 5730550P09 [R... 446 e-123
gi|46229729|gb|EAK90547.1| Prp16p pre-mRNA splicing factor. HrpA... 445 e-123
gi|46444943|gb|EAL04214.1| hypothetical protein CaO19.13287 [Can... 444 e-123
gi|45550174|ref|NP_609356.2| CG4901-PA [Drosophila melanogaster]... 443 e-123
gi|50422299|ref|XP_459712.1| unnamed protein product [Debaryomyc... 437 e-121
gi|50747142|ref|XP_420761.1| PREDICTED: similar to Putative pre-... 434 e-120
gi|46437388|gb|EAK96735.1| hypothetical protein CaO19.2818 [Cand... 429 e-118
gi|19114541|ref|NP_593629.1| putative pre-mrna splicing factor, ... 429 e-118
gi|31216263|ref|XP_316200.1| ENSANGP00000005937 [Anopheles gambi... 427 e-118
gi|23619564|ref|NP_705526.1| splicing factor, putative [Plasmodi... 422 e-116
gi|46109326|ref|XP_381721.1| hypothetical protein FG01545.1 [Gib... 422 e-116
gi|7544061|emb|CAB87205.1| putative pre-mrna splicing factor; at... 420 e-116
gi|50310679|ref|XP_455361.1| unnamed protein product [Kluyveromy... 418 e-115
gi|23483033|gb|EAA18834.1| pre-mRNA splicing factor ATP-dependen... 410 e-113
gi|45188160|ref|NP_984383.1| ADR287Cp [Eremothecium gossypii] >g... 408 e-112
gi|50290129|ref|XP_447496.1| unnamed protein product [Candida gl... 407 e-112
gi|6324338|ref|NP_014408.1| RNA-dependent ATPase in the DEAH-box... 401 e-110
gi|49070804|ref|XP_399691.1| hypothetical protein UM02076.1 [Ust... 400 e-110
gi|7770157|gb|AAF69614.1| PRO2014 [Homo sapiens] 392 e-107
gi|31542729|ref|NP_078888.3| DEAH (Asp-Glu-Ala-His) box polypept... 390 e-107
gi|39595570|emb|CAE67071.1| Hypothetical protein CBG12480 [Caeno... 389 e-106
gi|18848216|gb|AAH24187.1| DEAH (Asp-Glu-Ala-His) box polypeptid... 388 e-106
gi|37194872|gb|AAH58276.1| Dhx40 protein [Mus musculus] 387 e-106
gi|18396548|ref|NP_564296.1| RNA helicase, putative [Arabidopsis... 384 e-105
gi|3913424|sp|O17438|DD15_STRPU Putative pre-mRNA splicing facto... 382 e-104
gi|23304704|emb|CAD48140.1| hypothetical protein [Brugia malayi] 381 e-104
gi|50727037|gb|AAB52427.3| Hypothetical protein T05E8.3 [Caenorh... 380 e-104
gi|50546625|ref|XP_500782.1| hypothetical protein [Yarrowia lipo... 380 e-104
gi|34872954|ref|XP_213429.2| similar to Hypothetical protein FLJ... 379 e-103
gi|25403042|pir||C86404 probable protein ATP-dependent RNA helic... 375 e-102
gi|50260256|gb|EAL22915.1| hypothetical protein CNBA6840 [Crypto... 374 e-102
gi|49097524|ref|XP_410222.1| hypothetical protein AN6085.2 [Aspe... 364 5e-99
gi|23484437|gb|EAA19765.1| putative ATP-dependent RNA helicase c... 363 7e-99
gi|47211726|emb|CAF92524.1| unnamed protein product [Tetraodon n... 361 5e-98
gi|19112682|ref|NP_595890.1| putative pre-mrna splicing factor a... 360 1e-97
gi|27229045|ref|NP_080467.2| DEAH (Asp-Glu-Ala-His) box polypept... 357 9e-97
gi|25141387|ref|NP_491604.2| DEAD H box polypeptide (1G42) [Caen... 356 1e-96
gi|46435871|gb|EAK95244.1| hypothetical protein CaO19.107 [Candi... 356 1e-96
gi|50428249|ref|XP_460232.1| unnamed protein product [Debaryomyc... 355 3e-96
gi|46435565|gb|EAK94944.1| hypothetical protein CaO19.7754 [Cand... 353 7e-96
gi|6322772|ref|NP_012845.1| Predominantly nucleolar DEAH-box RNA... 353 1e-95
gi|50312429|ref|XP_456248.1| unnamed protein product [Kluyveromy... 352 2e-95
gi|46133270|ref|ZP_00203119.1| COG1643: HrpA-like helicases [Hae... 351 5e-95
gi|46913376|emb|CAG20164.1| putative ATP-dependent helicase HrpA... 350 6e-95
gi|46129044|ref|ZP_00155660.2| COG1643: HrpA-like helicases [Hae... 350 6e-95
gi|37526066|ref|NP_929410.1| ATP-dependent helicase [Photorhabdu... 349 1e-94
gi|27469550|gb|AAH42040.1| DHX33 protein [Homo sapiens] 349 1e-94
gi|48868338|ref|ZP_00321685.1| COG1643: HrpA-like helicases [Hae... 348 2e-94
gi|50758346|ref|XP_415878.1| PREDICTED: similar to Clathrin heav... 347 5e-94
gi|46156710|ref|ZP_00132238.2| COG1643: HrpA-like helicases [Hae... 345 2e-93
gi|23467080|ref|ZP_00122665.1| COG1643: HrpA-like helicases [Hae... 345 3e-93
gi|37680179|ref|NP_934788.1| ATP-dependent helicase HrpA [Vibrio... 344 4e-93
gi|46108950|ref|XP_381533.1| hypothetical protein FG01357.1 [Gib... 343 8e-93
gi|50287643|ref|XP_446251.1| unnamed protein product [Candida gl... 343 1e-92
gi|27365663|ref|NP_761191.1| ATP-dependent helicase HrpA [Vibrio... 343 1e-92
gi|16273001|ref|NP_439228.1| ATP-dependent helicase [Haemophilus... 343 1e-92
gi|1074634|pir||G64165 ATP-dependent helicase hrpA homolog HI107... 343 1e-92
gi|22125903|ref|NP_669326.1| helicase, ATP-dependent [Yersinia p... 342 2e-92
gi|16122546|ref|NP_405859.1| ATP-dependent helicase [Yersinia pe... 342 2e-92
gi|48787853|ref|ZP_00283832.1| COG1643: HrpA-like helicases [Bur... 342 2e-92
gi|48835334|ref|ZP_00292334.1| COG1643: HrpA-like helicases [The... 341 4e-92
gi|30248837|ref|NP_840907.1| HrpA-like helicases [Nitrosomonas e... 340 6e-92
gi|48729690|ref|ZP_00263440.1| COG1643: HrpA-like helicases [Pse... 340 6e-92
gi|16760246|ref|NP_455863.1| ATP-dependent helicase HrpA [Salmon... 340 8e-92
gi|50120933|ref|YP_050100.1| ATP-dependent helicase [Erwinia car... 340 1e-91
gi|34496971|ref|NP_901186.1| ATP-dependent helicase hrpA [Chromo... 339 1e-91
gi|16764985|ref|NP_460600.1| ATP-dependent helicase [Salmonella ... 339 1e-91
gi|46164155|ref|ZP_00136651.2| COG1643: HrpA-like helicases [Pse... 338 2e-91
gi|15598493|ref|NP_251987.1| probable ATP-dependent helicase [Ps... 338 2e-91
gi|26991230|ref|NP_746655.1| ATP-dependent helicase HrpA [Pseudo... 338 3e-91
gi|28898227|ref|NP_797832.1| ATP-dependent helicase HrpA [Vibrio... 338 4e-91
gi|15801734|ref|NP_287752.1| helicase, ATP-dependent [Escherichi... 337 5e-91
gi|30062885|ref|NP_837056.1| helicase [Shigella flexneri 2a str.... 337 5e-91
gi|24113153|ref|NP_707663.1| ATP-dependent helicase HrpA [Shigel... 337 5e-91
gi|26247701|ref|NP_753741.1| ATP-dependent helicase hrpA [Escher... 337 9e-91
gi|414604|gb|AAA34986.1| RNA helicase 336 1e-90
gi|19173135|ref|NP_596938.1| PRE-mRNA SPLICING FACTOR (DEAD box ... 336 1e-90
gi|23471151|ref|ZP_00126482.1| COG1643: HrpA-like helicases [Pse... 336 2e-90
gi|19114432|ref|NP_593520.1| putative ATP dependent RNA helicase... 335 3e-90
gi|48860878|ref|ZP_00314786.1| COG1643: HrpA-like helicases [Mic... 335 3e-90
gi|15602634|ref|NP_245706.1| HrpA [Pasteurella multocida Pm70] >... 335 4e-90
gi|15641394|ref|NP_231026.1| ATP-dependent helicase HrpA [Vibrio... 334 5e-90
gi|49176106|ref|NP_415931.3| helicase, ATP-dependent [Escherichi... 334 6e-90
gi|13638202|sp|P43329|HRPA_ECOLI ATP-dependent helicase hrpA 334 6e-90
gi|46321426|ref|ZP_00221803.1| COG1643: HrpA-like helicases [Bur... 333 1e-89
gi|45188013|ref|NP_984236.1| ADR140Cp [Eremothecium gossypii] >g... 333 1e-89
gi|32035763|ref|ZP_00135626.1| COG1643: HrpA-like helicases [Act... 332 2e-89
gi|28871237|ref|NP_793856.1| ATP-dependent helicase HrpA [Pseudo... 332 2e-89
gi|17545970|ref|NP_519372.1| PROBABLE ATP-DEPENDENT RNA HELICASE... 332 2e-89
gi|24641942|ref|NP_727764.1| CG32604-PB [Drosophila melanogaster... 330 7e-89
gi|50877096|emb|CAG36936.1| related to ATP-dependent helicase Hr... 330 1e-88
gi|48769546|ref|ZP_00273891.1| COG1643: HrpA-like helicases [Ral... 329 1e-88
gi|19074886|ref|NP_586392.1| possible PRE-mRNA SPLICING FACTOR (... 328 3e-88
gi|21312618|ref|NP_082159.1| DEAH (Asp-Glu-Ala-His) box polypept... 325 3e-87
gi|24373783|ref|NP_717826.1| ATP-dependent helicase HrpA [Shewan... 325 3e-87
gi|7839559|gb|AAF70326.1| PAD [Homo sapiens] 325 3e-87
gi|47116751|sp|Q9DBV3|DD34_MOUSE Probable ATP-dependent helicase... 325 4e-87
gi|37359788|dbj|BAC97872.1| mKIAA0134 protein [Mus musculus] 325 4e-87
gi|38158022|ref|NP_055496.2| DEAH (Asp-Glu-Ala-His) box polypept... 323 8e-87
gi|38158020|ref|NP_919409.1| DEAH (Asp-Glu-Ala-His) box polypept... 323 8e-87
gi|15595172|ref|NP_212961.1| ATP-dependent helicase (hrpA) [Borr... 323 1e-86
gi|23105255|ref|ZP_00091713.1| COG1643: HrpA-like helicases [Azo... 322 2e-86
gi|29250876|gb|EAA42363.1| GLP_137_1747_3888 [Giardia lamblia AT... 322 3e-86
gi|806328|dbj|BAA07685.1| A protein similar to yeast PRP16 and P... 319 2e-85
gi|41407782|ref|NP_960618.1| HrpA [Mycobacterium avium subsp. pa... 318 3e-85
gi|21232376|ref|NP_638293.1| ATP dependent RNA helicase [Xanthom... 317 8e-85
gi|38101970|gb|EAA48865.1| hypothetical protein MG00523.4 [Magna... 315 3e-84
gi|48831213|ref|ZP_00288287.1| COG1643: HrpA-like helicases [Mag... 314 5e-84
gi|33602377|ref|NP_889937.1| putative ATP-dependent helicase [Bo... 313 1e-83
gi|33596337|ref|NP_883980.1| putative ATP-dependent helicase [Bo... 313 1e-83
gi|29830671|ref|NP_825305.1| putative ATP-dependent helicase [St... 312 2e-83
gi|15639516|ref|NP_218966.1| ATP-dependent helicase (hrpA) [Trep... 311 3e-83
gi|33593328|ref|NP_880972.1| putative ATP-dependent helicase [Bo... 311 3e-83
gi|21243849|ref|NP_643431.1| ATP-dependent RNA helicase [Xanthom... 311 5e-83
gi|19553131|ref|NP_601133.1| HrpA-like helicase [Corynebacterium... 311 5e-83
gi|4581864|gb|AAD24770.1| putative pre-mRNA splicing factor ATP-... 310 7e-83
gi|32472986|ref|NP_865980.1| ATP-dependent helicase hrpA [Pirell... 310 7e-83
gi|21222494|ref|NP_628273.1| ATP-dependent helicase [Streptomyce... 310 9e-83
gi|38234008|ref|NP_939775.1| Putative ATP-dependent helicase [Co... 308 3e-82
gi|37535284|ref|NP_921944.1| putative ATP-dependent RNA helicase... 308 3e-82
gi|46441358|gb|EAL00656.1| hypothetical protein CaO19.2090 [Cand... 308 5e-82
gi|49067488|ref|XP_398034.1| hypothetical protein UM00419.1 [Ust... 307 6e-82
gi|25028375|ref|NP_738429.1| putative ATP-dependent helicase [Co... 307 6e-82
gi|50085222|ref|YP_046732.1| ATP-dependent helicase [Acinetobact... 307 8e-82
gi|46362770|ref|ZP_00225613.1| COG1643: HrpA-like helicases [Kin... 305 4e-81
gi|42527161|ref|NP_972259.1| ATP-dependent helicase HrpA, putati... 304 5e-81
gi|30683133|ref|NP_196599.2| helicase domain-containing protein ... 303 1e-80
gi|11357363|pir||T50002 hypothetical protein F12B17.280 - Arabid... 303 1e-80
gi|47223749|emb|CAF98519.1| unnamed protein product [Tetraodon n... 302 3e-80
gi|30686606|ref|NP_850255.1| helicase domain-containing protein ... 298 3e-79
gi|18411509|ref|NP_567206.1| helicase domain-containing protein ... 298 4e-79
gi|7486358|pir||T10542 hypothetical protein F3I3.40 - Arabidopsi... 298 4e-79
gi|47574946|ref|ZP_00244981.1| COG1643: HrpA-like helicases [Rub... 296 2e-78
gi|31242751|ref|XP_321806.1| ENSANGP00000016870 [Anopheles gambi... 296 2e-78
gi|42661208|ref|XP_372677.2| similar to DEAH (Asp-Glu-Ala-His) b... 294 5e-78
gi|50842512|ref|YP_055739.1| ATP-dependent helicase HrpA [Propio... 293 9e-78
gi|25408429|pir||F84774 probable ATP-dependent RNA helicase A [i... 293 1e-77
gi|10438089|dbj|BAB15166.1| unnamed protein product [Homo sapiens] 291 3e-77
gi|8977905|emb|CAB95775.1| hypothetical protein [Homo sapiens] 290 8e-77
gi|32566588|ref|NP_872264.1| predicted CDS, helicase-associated ... 288 4e-76
gi|18376272|emb|CAD21386.1| conserved hypothetical protein [Neur... 288 4e-76
gi|50761474|ref|XP_424728.1| PREDICTED: similar to DEAH (Asp-Glu... 286 1e-75
gi|28198528|ref|NP_778842.1| ATP-dependent helicase [Xylella fas... 286 1e-75
gi|31222849|ref|XP_317231.1| ENSANGP00000011399 [Anopheles gambi... 286 1e-75
gi|19112478|ref|NP_595686.1| putative ATP-dependent RNA helicase... 286 1e-75
gi|15837984|ref|NP_298672.1| helicase, ATP dependent [Xylella fa... 286 2e-75
gi|18087663|gb|AAL58955.1| putative helicase [Oryza sativa] 286 2e-75
gi|22997025|ref|ZP_00041264.1| COG1643: HrpA-like helicases [Xyl... 285 4e-75
gi|46125529|ref|XP_387318.1| hypothetical protein FG07142.1 [Gib... 284 5e-75
gi|32422405|ref|XP_331646.1| hypothetical protein [Neurospora cr... 281 4e-74
gi|33146632|dbj|BAC79920.1| putative DEAD/H (Asp-Glu-Ala-Asp/His... 281 5e-74
gi|34906822|ref|NP_914758.1| similar to pre-mRNA splicing factor... 281 5e-74
gi|19353967|gb|AAH24489.1| Dhx38 protein [Mus musculus] 281 5e-74
gi|2317715|gb|AAB66335.1| HelD [Dictyostelium discoideum] 278 4e-73
gi|26329317|dbj|BAC28397.1| unnamed protein product [Mus musculus] 275 4e-72
gi|13905230|gb|AAH06911.1| Dhx32 protein [Mus musculus] 274 6e-72
gi|19527160|ref|NP_598702.1| helicase DDX32; DEAD/H (Asp-Glu-Ala... 274 6e-72
gi|34783118|gb|AAH02473.2| DEAD/H (Asp-Glu-Ala-Asp/His) box poly... 273 1e-71
gi|19074677|ref|NP_586183.1| PRE-mRNA SPLICING FACTOR [Encephali... 273 1e-71
gi|20336300|ref|NP_060650.2| DEAD/H (Asp-Glu-Ala-Asp/His) box po... 273 1e-71
gi|30025091|gb|AAF59456.3| Hypothetical protein Y37E11AM.1 [Caen... 273 1e-71
gi|17543090|ref|NP_500405.1| helicase, C-terminal and Helicase-a... 273 1e-71
gi|7022881|dbj|BAA91754.1| unnamed protein product [Homo sapiens] 273 1e-71
gi|23478977|gb|EAA15925.1| Unknown protein [Plasmodium yoelii yo... 271 4e-71
gi|38111072|gb|EAA56704.1| hypothetical protein MG07059.4 [Magna... 271 6e-71
gi|39583652|emb|CAE63756.1| Hypothetical protein CBG08291 [Caeno... 270 8e-71
gi|23465866|ref|NP_696469.1| ATP-dependent helicase [Bifidobacte... 270 8e-71
gi|47194199|emb|CAF90919.1| unnamed protein product [Tetraodon n... 270 1e-70
gi|7023212|dbj|BAA91882.1| unnamed protein product [Homo sapiens] 267 9e-70
gi|47227881|emb|CAG09044.1| unnamed protein product [Tetraodon n... 260 4e-69
gi|46441629|gb|EAL00925.1| hypothetical protein CaO19.14110 [Can... 264 6e-69
gi|46191062|ref|ZP_00206659.1| COG1643: HrpA-like helicases [Bif... 261 5e-68
gi|18497286|ref|NP_065916.1| DEAH (Asp-Glu-Ala-His) box polypept... 260 8e-68
gi|7959237|dbj|BAA96012.1| KIAA1488 protein [Homo sapiens] 260 8e-68
gi|34861132|ref|XP_341949.1| similar to helicase DDX32 [Rattus n... 260 1e-67
gi|15793438|ref|NP_283260.1| ATP-dependent DNA helicase [Neisser... 260 1e-67
gi|45190700|ref|NP_984954.1| AER094Cp [Eremothecium gossypii] >g... 259 2e-67
gi|34856279|ref|XP_238357.2| similar to DEAQ RNA-dependent ATPas... 258 3e-67
gi|15678020|ref|NP_274999.1| ATP-dependent RNA helicase HrpA [Ne... 258 3e-67
gi|19424112|ref|NP_291084.1| DEAQ RNA-dependent ATPase [Mus musc... 256 2e-66
gi|30794390|ref|NP_082412.1| DEAH (Asp-Glu-Ala-His) box polypept... 255 3e-66
gi|47222314|emb|CAG05063.1| unnamed protein product [Tetraodon n... 255 4e-66
gi|48834408|ref|ZP_00291423.1| COG1643: HrpA-like helicases [Mag... 254 8e-66
gi|28829757|gb|AAO52259.1| similar to Oryza sativa (Rice). Putat... 254 8e-66
gi|50547773|ref|XP_501356.1| hypothetical protein [Yarrowia lipo... 251 4e-65
gi|50306461|ref|XP_453204.1| unnamed protein product [Kluyveromy... 251 5e-65
gi|24643238|ref|NP_728244.1| CG32533-PA [Drosophila melanogaster... 250 9e-65
gi|49089030|ref|XP_406275.1| hypothetical protein AN2138.2 [Aspe... 248 6e-64
gi|11346351|pir||T50372 probable ATP-dependent RNA helicase cdc2... 245 3e-63
gi|29169166|gb|AAO66336.1| ATP-dependent RNA helicase [Myxococcu... 244 5e-63
gi|40644065|emb|CAE11803.1| putative DExH/D RNA helicase [Homo s... 244 6e-63
gi|49118496|gb|AAH73477.1| Unknown (protein for MGC:80994) [Xeno... 243 1e-62
gi|50423967|ref|XP_460568.1| unnamed protein product [Debaryomyc... 243 1e-62
gi|26326933|dbj|BAC27210.1| unnamed protein product [Mus musculus] 242 2e-62
gi|39996937|ref|NP_952888.1| ATP-dependent helicase HrpB [Geobac... 242 3e-62
gi|50290941|ref|XP_447903.1| unnamed protein product [Candida gl... 241 4e-62
gi|47214890|emb|CAG01021.1| unnamed protein product [Tetraodon n... 239 2e-61
gi|24642763|ref|NP_573208.1| CG8915-PA [Drosophila melanogaster]... 238 3e-61
gi|8118102|gb|AAF72892.1| putative DEAH-box RNA helicase [Trypan... 238 6e-61
gi|48123124|ref|XP_396525.1| similar to Dosage compensation regu... 235 3e-60
gi|23243423|gb|AAH36035.1| DHX36 protein [Homo sapiens] 234 5e-60
gi|50254633|gb|EAL17380.1| hypothetical protein CNBM1850 [Crypto... 234 8e-60
gi|15963820|ref|NP_384173.1| ATP-DEPENDENT HELICASE PROTEIN [Sin... 233 1e-59
gi|12320894|gb|AAG50585.1| RNA helicase, putative, 5' partial [A... 233 1e-59
gi|7507209|pir||T29623 hypothetical protein T05E8.3 - Caenorhabd... 232 2e-59
gi|15837831|ref|NP_298519.1| ATP-dependent helicase [Xylella fas... 231 7e-59
gi|42524497|ref|NP_969877.1| helicase [Bdellovibrio bacteriovoru... 230 1e-58
gi|48846621|ref|ZP_00300882.1| COG1643: HrpA-like helicases [Geo... 230 1e-58
gi|28198417|ref|NP_778731.1| ATP-dependent helicase [Xylella fas... 230 1e-58
gi|49075304|ref|XP_401727.1| hypothetical protein UM04112.1 [Ust... 229 2e-58
gi|1213496|gb|AAC45544.1| HelO [Sinorhizobium meliloti] 229 2e-58
gi|20336294|ref|NP_619520.1| DEAH (Asp-Glu-Ala-His) box polypept... 229 2e-58
gi|20336290|ref|NP_055781.2| DEAH (Asp-Glu-Ala-His) box polypept... 229 2e-58
gi|40788976|dbj|BAA74913.2| KIAA0890 protein [Homo sapiens] 229 2e-58
gi|34866433|ref|XP_345986.1| similar to 2810477H02Rik protein [R... 229 3e-58
gi|19111156|ref|NP_579925.1| HELG [Mus musculus] >gnl|BL_ORD_ID|... 229 3e-58
gi|13278588|gb|AAH04082.1| Dhx30 protein [Mus musculus] 229 3e-58
gi|47205228|emb|CAF92278.1| unnamed protein product [Tetraodon n... 229 3e-58
gi|16740643|gb|AAH16202.1| Dhx30 protein [Mus musculus] 229 3e-58
gi|37524876|ref|NP_928220.1| ATP-dependent helicase HrpB [Photor... 228 5e-58
gi|22996669|ref|ZP_00040917.1| COG1643: HrpA-like helicases [Xyl... 225 3e-57
gi|47220387|emb|CAF98486.1| unnamed protein product [Tetraodon n... 225 3e-57
gi|22994030|ref|ZP_00038555.1| COG1643: HrpA-like helicases [Xyl... 225 4e-57
gi|48855270|ref|ZP_00309429.1| COG1643: HrpA-like helicases [Cyt... 222 3e-56
gi|16125437|ref|NP_420001.1| helicase, putative [Caulobacter cre... 222 3e-56
gi|23508999|ref|NP_701667.1| pre-mRNA splicing factor RNA helica... 221 4e-56
gi|27383239|ref|NP_774768.1| helicase [Bradyrhizobium japonicum ... 221 4e-56
gi|26991453|ref|NP_746878.1| ATP-dependent helicase HrpB [Pseudo... 221 7e-56
gi|48729012|ref|ZP_00262765.1| COG1643: HrpA-like helicases [Pse... 220 1e-55
gi|1742299|dbj|BAA15025.1| ATP-dependent helicase HrpA homolog. ... 220 1e-55
gi|28871855|ref|NP_794474.1| ATP-dependent helicase HrpB [Pseudo... 219 2e-55
gi|39933612|ref|NP_945888.1| putative ATP-dependent helicase [Rh... 219 2e-55
gi|127156|sp|P24785|MLE_DROME Dosage compensation regulator (Mal... 219 2e-55
gi|48856900|ref|ZP_00311057.1| COG1643: HrpA-like helicases [Cyt... 219 3e-55
gi|15599156|ref|NP_252650.1| probable ATP-dependent helicase [Ps... 218 5e-55
gi|30694379|ref|NP_175298.2| helicase domain-containing protein ... 217 8e-55
gi|12597813|gb|AAG60124.1| hypothetical protein [Arabidopsis tha... 217 8e-55
gi|32472864|ref|NP_865858.1| ATP-dependent helicase [Pirellula s... 217 1e-54
gi|28573977|ref|NP_476642.2| CG11680-PB [Drosophila melanogaster... 217 1e-54
gi|17136342|ref|NP_476641.1| CG11680-PA [Drosophila melanogaster... 217 1e-54
gi|28381003|gb|AAO41468.1| LD44547p [Drosophila melanogaster] >g... 217 1e-54
gi|22124707|ref|NP_668130.1| helicase, ATP-dependent [Yersinia p... 216 2e-54
gi|31206265|ref|XP_312084.1| ENSANGP00000016747 [Anopheles gambi... 216 2e-54
gi|16123543|ref|NP_406856.1| ATP-dependent helicase [Yersinia pe... 216 2e-54
gi|19075550|ref|NP_588050.1| putative pre-mrna splicing factor r... 215 3e-54
gi|15887410|ref|NP_353091.1| AGR_C_86p [Agrobacterium tumefacien... 215 4e-54
gi|17933977|ref|NP_530767.1| helicase [Agrobacterium tumefaciens... 215 4e-54
gi|19525735|ref|NP_598376.1| DEAQ box polypeptide 1 (RNA-depende... 214 7e-54
gi|15805447|ref|NP_294143.1| ATP-dependent helicase [Deinococcus... 213 1e-53
gi|13474426|ref|NP_105994.1| ATP-dependent helicase [Mesorhizobi... 213 1e-53
gi|48099108|ref|XP_394864.1| similar to Probable ATP-dependent h... 213 2e-53
gi|48765429|ref|ZP_00269979.1| COG1643: HrpA-like helicases [Rho... 212 3e-53
gi|28899272|ref|NP_798877.1| ATP-dependent helicase HrpB [Vibrio... 211 4e-53
gi|21241067|ref|NP_640649.1| ATP-dependent RNA helicase [Xanthom... 211 6e-53
gi|48103779|ref|XP_392895.1| similar to ENSANGP00000016747 [Apis... 211 6e-53
gi|15217831|ref|NP_176102.1| helicase domain-containing protein ... 211 8e-53
gi|17988101|ref|NP_540735.1| ATP-DEPENDENT HELICASE HRPB [Brucel... 210 1e-52
gi|46188126|ref|ZP_00126158.2| COG1643: HrpA-like helicases [Pse... 210 1e-52
gi|23009745|ref|ZP_00050680.1| COG1643: HrpA-like helicases [Mag... 209 2e-52
gi|21229753|ref|NP_635670.1| ATP-dependent RNA helicase [Xanthom... 209 2e-52
gi|20197904|gb|AAM15307.1| putative RNA helicase A [Arabidopsis ... 208 5e-52
gi|15227260|ref|NP_178223.1| helicase domain-containing protein ... 208 5e-52
gi|39597525|emb|CAE59755.1| Hypothetical protein CBG03202 [Caeno... 208 5e-52
gi|25410882|pir||A84421 probable ATP-dependent RNA helicase A [i... 208 5e-52
gi|50876972|emb|CAG36812.1| related to ATP-dependent helicase [D... 207 6e-52
gi|23102966|ref|ZP_00089461.1| COG1643: HrpA-like helicases [Azo... 207 1e-51
gi|48862659|ref|ZP_00316554.1| COG1643: HrpA-like helicases [Mic... 207 1e-51
gi|46120972|ref|ZP_00173788.2| COG1643: HrpA-like helicases [Met... 206 2e-51
gi|46914697|emb|CAG21474.1| hypothetical ATP-dependent helicase ... 206 2e-51
gi|13812299|ref|NP_113417.1| putative ATP-dependent RNA helicase... 204 5e-51
gi|45915102|ref|ZP_00193641.2| COG1643: HrpA-like helicases [Mes... 203 2e-50
gi|12850145|dbj|BAB28610.1| unnamed protein product [Mus musculus] 202 3e-50
gi|6624595|emb|CAB63784.1| cdc28 [Schizosaccharomyces pombe] 202 4e-50
gi|50764076|ref|XP_422932.1| PREDICTED: similar to putative RNA ... 201 6e-50
gi|48849867|ref|ZP_00304110.1| COG1643: HrpA-like helicases [Nov... 200 1e-49
gi|25026697|ref|NP_736751.1| putative ATP-dependent helicase [Co... 199 2e-49
gi|24372223|ref|NP_716265.1| ATP-dependent helicase HrpB [Shewan... 198 5e-49
gi|37680941|ref|NP_935550.1| ATP-dependent helicase HrpB [Vibrio... 197 1e-48
gi|46579954|ref|YP_010762.1| ATP-dependent helicase HrpB [Desulf... 195 3e-48
gi|27365012|ref|NP_760540.1| ATP-dependent helicase HrpB [Vibrio... 195 4e-48
gi|15640622|ref|NP_230251.1| ATP-dependent helicase HrpB [Vibrio... 194 6e-48
gi|50773518|ref|XP_423195.1| PREDICTED: similar to ATP-dependent... 193 1e-47
gi|34903904|ref|NP_913299.1| unnamed protein product [Oryza sati... 193 1e-47
gi|50756307|ref|XP_415104.1| PREDICTED: similar to DEAH (Asp-Glu... 193 1e-47
gi|34895324|ref|NP_909005.1| putative ATP-dependent RNA helicase... 193 2e-47
gi|50291915|ref|XP_448390.1| unnamed protein product [Candida gl... 192 2e-47
gi|12845870|dbj|BAB26933.1| unnamed protein product [Mus musculus] 192 3e-47
gi|18490480|gb|AAH22656.1| Dhx8 protein [Mus musculus] 192 3e-47
gi|26246092|ref|NP_752131.1| ATP-dependent helicase hrpB [Escher... 192 4e-47
gi|7486291|pir||T04542 hypothetical protein F28J12.120 - Arabido... 191 8e-47
gi|38232759|ref|NP_938526.1| Putative ATP-dependent helicase [Co... 191 8e-47
gi|15799832|ref|NP_285844.1| helicase, ATP-dependent [Escherichi... 190 1e-46
gi|46123447|ref|XP_386277.1| hypothetical protein FG06101.1 [Gib... 188 5e-46
gi|41324368|emb|CAF18708.1| PROBABLE ATP-DEPENDENT RNA HELICASE ... 187 7e-46
gi|23308778|ref|NP_599394.2| HrpA-like helicase [Corynebacterium... 187 7e-46
gi|6323776|ref|NP_013847.1| Essential DEAH-box ATP-dependent RNA... 187 1e-45
gi|16763579|ref|NP_459194.1| ATP-dependent helicase [Salmonella ... 186 2e-45
gi|38103601|gb|EAA50281.1| hypothetical protein MG04040.4 [Magna... 186 3e-45
gi|16128141|ref|NP_414690.1| helicase, ATP-dependent [Escherichi... 185 3e-45
gi|2507332|sp|P37024|HRPB_ECOLI ATP-dependent helicase hrpB 185 3e-45
gi|34856989|ref|XP_227203.2| similar to DEAD/H box polypeptide 3... 185 4e-45
gi|29248813|gb|EAA40338.1| GLP_22_13030_14940 [Giardia lamblia A... 185 4e-45
gi|16759188|ref|NP_454805.1| ATP-dependent helicase HrpB [Salmon... 185 4e-45
gi|20197581|gb|AAD14515.3| putative RNA helicase A [Arabidopsis ... 184 6e-45
gi|24111586|ref|NP_706096.1| helicase, ATP-dependent [Shigella f... 184 8e-45
gi|38014365|gb|AAH02575.2| DHX37 protein [Homo sapiens] 184 1e-44
gi|50122236|ref|YP_051403.1| ATP-dependent helicase [Erwinia car... 184 1e-44
gi|45198740|ref|NP_985769.1| AFR222Wp [Eremothecium gossypii] >g... 183 1e-44
gi|34854165|ref|XP_215481.2| similar to DEAH (Asp-Glu-Ala-His) b... 183 1e-44
gi|26390418|dbj|BAC25894.1| unnamed protein product [Mus musculus] 183 2e-44
gi|46852276|ref|NP_766182.2| DEAH (Asp-Glu-Ala-His) box polypept... 183 2e-44
gi|19074102|ref|NP_584708.1| ATP-DEPENDENT RNA HELICASE (DEAD bo... 182 2e-44
gi|33866711|ref|NP_898270.1| putative HrpA-like helicase [Synech... 182 2e-44
gi|42600571|ref|NP_976064.1| DEAH (Asp-Glu-Ala-His) box polypept... 182 3e-44
gi|10439922|dbj|BAB15596.1| unnamed protein product [Homo sapiens] 181 5e-44
gi|50841643|ref|YP_054870.1| ATP-dependent helicase [Propionibac... 181 5e-44
gi|29029601|ref|NP_116045.2| DEAH (Asp-Glu-Ala-His) box polypept... 181 5e-44
gi|7959301|dbj|BAA96041.1| KIAA1517 protein [Homo sapiens] 181 6e-44
gi|38080777|ref|XP_355641.1| similar to DEAH (Asp-Glu-Ala-His) b... 181 6e-44
gi|46164588|ref|ZP_00137398.2| COG1643: HrpA-like helicases [Pse... 181 8e-44
gi|28898033|ref|NP_797638.1| putative ATP-dependent helicase [Vi... 181 8e-44
gi|50752566|ref|XP_422834.1| PREDICTED: similar to DEAH (Asp-Glu... 181 8e-44
gi|34872286|ref|XP_213772.2| similar to DEAH (Asp-Glu-Ala-His) b... 181 8e-44
gi|49076656|ref|XP_402280.1| hypothetical protein UM04665.1 [Ust... 180 1e-43
gi|15242161|ref|NP_196994.1| helicase associated (HA2) domain-co... 180 1e-43
gi|5102733|emb|CAB45191.1| hypothetical protein, similar to (AC0... 179 3e-43
gi|33440541|gb|AAH56219.1| DEAH (Asp-Glu-Ala-His) box polypeptid... 179 3e-43
gi|26553432|ref|NP_061903.1| DEAH (Asp-Glu-Ala-His) box polypept... 179 3e-43
gi|11359994|pir||T47184 hypothetical protein DKFZp434F1526.1 - h... 179 3e-43
gi|21740289|emb|CAD39154.1| hypothetical protein [Homo sapiens] 179 3e-43
gi|22959231|ref|ZP_00006887.1| COG1643: HrpA-like helicases [Rho... 177 7e-43
gi|50311673|ref|XP_455863.1| unnamed protein product [Kluyveromy... 176 2e-42
gi|15217524|ref|NP_174605.1| helicase domain-containing protein ... 176 3e-42
gi|12322573|gb|AAG51287.1| helicase, putative [Arabidopsis thali... 176 3e-42
gi|23475021|ref|ZP_00130311.1| COG1643: HrpA-like helicases [Des... 175 5e-42
gi|24641139|ref|NP_572663.1| CG1582-PA [Drosophila melanogaster]... 174 6e-42
gi|32404992|ref|XP_323109.1| hypothetical protein ( (AL451018) c... 174 8e-42
gi|47219913|emb|CAF97183.1| unnamed protein product [Tetraodon n... 174 8e-42
gi|48098777|ref|XP_392558.1| similar to FLJ21940 protein [Apis m... 174 8e-42
gi|15227112|ref|NP_182290.1| zinc finger (CCCH type) helicase fa... 173 1e-41
gi|29832773|ref|NP_827407.1| putative ATP-dependent RNA helicase... 173 2e-41
gi|50259111|gb|EAL21788.1| hypothetical protein CNBC4900 [Crypto... 172 3e-41
gi|39581382|emb|CAE69279.1| Hypothetical protein CBG15333 [Caeno... 172 4e-41
gi|24585491|ref|NP_610056.1| CG9323-PA [Drosophila melanogaster]... 171 5e-41
gi|47224961|emb|CAF97376.1| unnamed protein product [Tetraodon n... 171 7e-41
gi|8118104|gb|AAF72893.1| putative DEAH-box RNA helicase [Trypan... 171 7e-41
>gi|17556386|ref|NP_497420.1| rna helicase (3C636) [Caenorhabditis
elegans]
gi|20137928|sp|Q9BKQ8|DD35_CAEEL Probable ATP-dependent helicase
DHX35 homolog
gi|13491301|gb|AAK27888.1| Hypothetical protein Y67D2.6
[Caenorhabditis elegans]
Length = 732
Score = 1414 bits (3659), Expect = 0.0
Identities = 702/732 (95%), Positives = 702/732 (95%)
Frame = -1
Query: 2199 MSYHPGHGHRQEPRKXXXXXXXXXRPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKV 2020
MSYHPGHGHRQEPRK RPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKV
Sbjct: 1 MSYHPGHGHRQEPRKGAGARRGFARPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKV 60
Query: 2019 HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWA 1840
HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWA
Sbjct: 61 HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWA 120
Query: 1839 ADGRQIVITQPXXXXXXXXXXXXAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLL 1660
ADGRQIVITQP AEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLL
Sbjct: 121 ADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLL 180
Query: 1659 REILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKD 1480
REILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKD
Sbjct: 181 REILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKD 240
Query: 1479 FFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDIL 1300
FFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDIL
Sbjct: 241 FFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDIL 300
Query: 1299 VFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA 1120
VFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA
Sbjct: 301 VFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA 360
Query: 1119 TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK 940
TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK
Sbjct: 361 TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK 420
Query: 939 CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE 760
CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE
Sbjct: 421 CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE 480
Query: 759 LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 580
LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF
Sbjct: 481 LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 540
Query: 579 ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV 400
ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV
Sbjct: 541 ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV 600
Query: 399 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 220
RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM
Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 660
Query: 219 YKGSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG 40
YKGSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG
Sbjct: 661 YKGSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG 720
Query: 39 PXXXXXXXXXDY 4
P DY
Sbjct: 721 PAATSAAADDDY 732
>gi|39586111|emb|CAE69187.1| Hypothetical protein CBG15221
[Caenorhabditis briggsae]
Length = 717
Score = 1259 bits (3259), Expect = 0.0
Identities = 619/718 (86%), Positives = 658/718 (91%)
Frame = -1
Query: 2193 YHPGHGHRQEPRKXXXXXXXXXRPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKVHN 2014
YHPGHG R E R RP D+AD PRTGPLI EE++TE +A P ++QLKV N
Sbjct: 1 YHPGHGQR-EHRGSAPTRRGFARPSDAADEPRTGPLILEEKTTETTSSAGPEDQQLKVFN 59
Query: 2013 NPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAAD 1834
NPYASLNIQQQRIRLPIFKNRGHILYMCERYRT+IIVGETGCGKSTQVPQFLLE GWA D
Sbjct: 60 NPYASLNIQQQRIRLPIFKNRGHILYMCERYRTLIIVGETGCGKSTQVPQFLLEFGWADD 119
Query: 1833 GRQIVITQPXXXXXXXXXXXXAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLRE 1654
GRQI ITQP AEE D +LGH++GYTVRFDDVSD+ TKVKFMTDGLLLRE
Sbjct: 120 GRQIAITQPRRVAVVTVATRVAEETDTLLGHNIGYTVRFDDVSDEATKVKFMTDGLLLRE 179
Query: 1653 ILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFF 1474
IL DP+LSKYSIIMIDEAHERSCNTDILLGLLRKI+Q+RNDLRIIVSSATLDAELF+DFF
Sbjct: 180 ILQDPMLSKYSIIMIDEAHERSCNTDILLGLLRKIMQVRNDLRIIVSSATLDAELFRDFF 239
Query: 1473 EMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVF 1294
EMNETGN +KDTA I+SVEGRTHPVAVHHTKT VP+YCQ+AVDTVINIHKHE PGDILVF
Sbjct: 240 EMNETGNPEKDTAAILSVEGRTHPVAVHHTKTPVPNYCQAAVDTVINIHKHEMPGDILVF 299
Query: 1293 LTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATN 1114
LTGQDEVEDVCEKLRE A L+NCD+LWVVPCYGALPA EQMKAFDSTPHGTRKVVVATN
Sbjct: 300 LTGQDEVEDVCEKLREEARKLRNCDKLWVVPCYGALPASEQMKAFDSTPHGTRKVVVATN 359
Query: 1113 IAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCY 934
IAEASITIPGICYVIDTGYVKLRA +A NGVE+LMRVTVS+ASAEQRAGRAGRIRPGKCY
Sbjct: 360 IAEASITIPGICYVIDTGYVKLRAVNANNGVESLMRVTVSQASAEQRAGRAGRIRPGKCY 419
Query: 933 RLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELL 754
RLYPESEF +F+EGT+PEIQRC +A+TILQLKALGVQNVH+FHYLSPPPSW+MI GLELL
Sbjct: 420 RLYPESEFRKFSEGTIPEIQRCHLAATILQLKALGVQNVHKFHYLSPPPSWSMIQGLELL 479
Query: 753 YALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFIT 574
YALGAIDE+SQLT PLGLQMAEFPLPPMHSKCLLKSAEFGCS E+VTIVAMMQIQDVF+T
Sbjct: 480 YALGAIDESSQLTDPLGLQMAEFPLPPMHSKCLLKSAEFGCSDEIVTIVAMMQIQDVFLT 539
Query: 573 PYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRS 394
P+R RHQAD+IRKKF+VEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRS
Sbjct: 540 PFRARHQADIIRKKFSVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRS 599
Query: 393 QLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYK 214
QLVRLLKRFEI KVS RGLIN SENIRQCLVTGFFSQAAQYHYTGKYMTVKE+FPFN+YK
Sbjct: 600 QLVRLLKRFEIPKVSCRGLINASENIRQCLVTGFFSQAAQYHYTGKYMTVKENFPFNVYK 659
Query: 213 GSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG 40
GSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG
Sbjct: 660 GSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG 717
>gi|20544129|ref|NP_068750.2| DEAH (Asp-Glu-Ala-His) box polypeptide
35; DEAH-box protein 35; DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 35 [Homo sapiens]
gi|20137971|sp|Q9H5Z1|DD35_HUMAN Probable ATP-dependent helicase
DHX35 (DEAH-box protein 35)
Length = 703
Score = 722 bits (1864), Expect = 0.0
Identities = 360/702 (51%), Positives = 494/702 (70%), Gaps = 14/702 (1%)
Frame = -1
Query: 2106 APRTGPLIFEERSTENAGAAPPIEEQLKVHN-------NPYASLNIQQQRIRLPIFKNRG 1948
A GP+ F TE G + E Q N NPYA+L+I+QQR +LP+FK R
Sbjct: 2 AAPVGPVKFWRPGTEGPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRN 61
Query: 1947 HILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXA 1768
HILY+ E Y+T++IVGETGCGKSTQ+PQ+L EAGW A+GR + +TQP A
Sbjct: 62 HILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVA 121
Query: 1767 EEKDCILGHDVGYTVRFDDVSDK-DTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHER 1591
EE+ +LGH+VGY +RFDD +D+ T++KF+TDG+L+RE++ DPLL+KYS+IM+DEAHER
Sbjct: 122 EERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHER 181
Query: 1590 SCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGR 1411
+ TDI +GLL+KI + R DLR+IV+SATLDA+ F+DFF NET + +DT I++VEGR
Sbjct: 182 TLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGR 241
Query: 1410 THPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL 1231
T PV + + ++ VPDY +S V+TV+ IH+ E GD+L FLTGQ+EVE V L E A L
Sbjct: 242 TFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARAL 301
Query: 1230 KNCD---RLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTG 1060
L V+P Y LP+ EQMK F+ RKV+VATN+AE SITI GI YVID G
Sbjct: 302 ARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCG 361
Query: 1059 YVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPE 880
+VKLRA + +E L+ V VS+ASA QRAGR GR R GKCYRLY E F++ + TVPE
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPE 421
Query: 879 IQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGL 700
+QR +A ILQLKALG+ NV RFH++SPPP+ +M+ LELLYALG +D+ +LT PLG+
Sbjct: 422 MQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGM 481
Query: 699 QMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVE 520
++AEFPL PM +K LL+S FGCS E+++I AMMQIQ++F+ P Q+ A + +KFAVE
Sbjct: 482 RIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVE 541
Query: 519 EGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRG 340
EGDH+TMLN++ F+++ + KWC +HF+NY+GL+RA VR QL +LL +F++ + SS G
Sbjct: 542 EGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEG 601
Query: 339 LINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTE 160
+ + +C+V+GFF+ AA++H TG Y T+++ +++ +S+++ + P+WVI+ E
Sbjct: 602 ---DPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP-ASVLYAEKPPRWVIYNE 657
Query: 159 VMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 43
V+Q S +RDVT IE WL ELAPH+Y+ GT L KR +
Sbjct: 658 VIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAK 699
>gi|10439270|dbj|BAB15476.1| unnamed protein product [Homo sapiens]
Length = 703
Score = 719 bits (1857), Expect = 0.0
Identities = 359/702 (51%), Positives = 493/702 (70%), Gaps = 14/702 (1%)
Frame = -1
Query: 2106 APRTGPLIFEERSTENAGAAPPIEEQLKVHN-------NPYASLNIQQQRIRLPIFKNRG 1948
A GP+ F TE G + E Q N NPYA+L+I+QQR +LP+FK R
Sbjct: 2 AAPVGPVKFWRPGTEGPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRN 61
Query: 1947 HILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXA 1768
HILY+ E Y+T++IVGETGCGKSTQ+PQ+L EAGW A+GR + +TQP A
Sbjct: 62 HILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVA 121
Query: 1767 EEKDCILGHDVGYTVRFDDVSDK-DTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHER 1591
EE+ +LGH+VGY +RFDD +D+ T++KF+TDG+L+RE++ DPLL+KYS+IM+DEAHER
Sbjct: 122 EERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHER 181
Query: 1590 SCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGR 1411
+ TDI +GLL+KI + R DLR+IV+SATLDA+ F+DFF NET + +DT I++VEGR
Sbjct: 182 TLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGR 241
Query: 1410 THPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL 1231
T PV + + ++ VPDY +S V+TV+ IH+ E GD+L FLTGQ+EVE V L E A L
Sbjct: 242 TFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARAL 301
Query: 1230 KNCD---RLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTG 1060
L V+P Y LP+ EQMK F+ RKV+VATN+AE SITI GI YVID G
Sbjct: 302 ARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCG 361
Query: 1059 YVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPE 880
+VKLRA + +E L+ V VS+ASA QRAGR GR R GKCYRLY E F++ + TVPE
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPE 421
Query: 879 IQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGL 700
+QR +A ILQLKALG+ NV RFH++SPPP+ +M+ LELLYALG +D+ +LT PLG+
Sbjct: 422 MQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGM 481
Query: 699 QMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVE 520
++AEFPL PM +K LL+S FGCS E+++I AMMQIQ++F+ P Q+ A + +KFAVE
Sbjct: 482 RIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVE 541
Query: 519 EGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRG 340
EGDH+TMLN++ F+++ + KWC +HF+NY+GL+RA V QL +LL +F++ + SS G
Sbjct: 542 EGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVGEQLKKLLVKFQVPRKSSEG 601
Query: 339 LINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTE 160
+ + +C+V+GFF+ AA++H TG Y T+++ +++ +S+++ + P+WVI+ E
Sbjct: 602 ---DPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP-ASVLYAEKPPRWVIYNE 657
Query: 159 VMQDS---IRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 43
V+Q S +RDVT IE WL ELAPH+Y+ GT L KR +
Sbjct: 658 VIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAK 699
>gi|13397805|emb|CAC03449.3| dJ616B8.1 (Similar to pre-mRNA splicing
RNA helicase) [Homo sapiens]
Length = 702
Score = 707 bits (1826), Expect = 0.0
Identities = 357/704 (50%), Positives = 490/704 (68%), Gaps = 24/704 (3%)
Frame = -1
Query: 2106 APRTGPLIFEERSTENAGAAPPIEEQLKVHN-------NPYASLNIQQQRIRLPIFKNRG 1948
A GP+ F TE G + E Q N NPYA+L+I+QQR +LP+FK R
Sbjct: 2 AAPVGPVKFWRPGTEGPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRN 61
Query: 1947 HILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXA 1768
HILY+ E Y+T++IVGETGCGKSTQ+PQ+L EAGW A+GR + +TQP
Sbjct: 62 HILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVRRVA- 120
Query: 1767 EEKDCILGHDVGYTVRFDDVSDK-DTKVKFMTDGLLLREILADPLLSKY----------S 1621
EE+ +LGH+VGY +RFDD +D+ T++KF+TDG+L+RE++ DPLL+KY S
Sbjct: 121 EERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYRLTESFSLILS 180
Query: 1620 IIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKD 1441
+IM+DEAHER+ TDI +GLL+KI + R DLR+IV+SATLDA+ F+DFF NET + +D
Sbjct: 181 VIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARD 240
Query: 1440 TAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVC 1261
T I++VEGRT PV + + ++ VPDY +S V+TV+ IH+ E GD+L FLTGQ+EVE V
Sbjct: 241 TCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVV 300
Query: 1260 EKLRELAGNLKNCD---RLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITI 1090
L E A L L V+P Y LP+ EQMK F+ RKV+VATN+AE SITI
Sbjct: 301 SMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITI 360
Query: 1089 PGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF 910
GI YVID G+VKLRA + +E L+ V VS+ASA QRAGR GR R GKCYRLY E F
Sbjct: 361 SGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF 420
Query: 909 ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDE 730
++ + TVPE+QR +A ILQLKALG+ NV RFH++SPPP+ +M+ LELLYALG +D+
Sbjct: 421 DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDK 480
Query: 729 TSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQA 550
+LT PLG+++AEFPL PM +K LL+S FGCS E+++I AMMQIQ++F+ P Q+ A
Sbjct: 481 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 540
Query: 549 DVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKR 370
+ +KFAVEEGDH+TMLN++ F+++ + KWC +HF+NY+GL+RA VR QL +LL +
Sbjct: 541 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVK 600
Query: 369 FEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKK 190
F++ + SS G + + +C+V+GFF+ AA++H TG Y T+++ +++ +S+++ +
Sbjct: 601 FQVPRKSSEG---DPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP-ASVLYAE 656
Query: 189 DYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYEFGTEG 67
P+WVI+ EV+Q S +RDVT IE WL ELAPH+Y+ GT G
Sbjct: 657 KPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTVG 700
>gi|21919420|ref|NP_665685.1| DEAH (Asp-Glu-Ala-His) box polypeptide
35 [Mus musculus]
gi|20987668|gb|AAH29709.1| DEAH (Asp-Glu-Ala-His) box polypeptide 35
[Mus musculus]
Length = 679
Score = 702 bits (1811), Expect = 0.0
Identities = 359/698 (51%), Positives = 481/698 (68%), Gaps = 14/698 (2%)
Frame = -1
Query: 2094 GPLIFEERSTENAGAAPPIEEQLKVHN-------NPYASLNIQQQRIRLPIFKNRGHILY 1936
GP+ F + TE G + E Q N NPYA+L+I+QQR +LP+FK R HILY
Sbjct: 6 GPVKFWKPGTEGPGVSISEERQSVTENSGTTIIYNPYAALSIEQQRQKLPVFKLRNHILY 65
Query: 1935 MCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXAEEKD 1756
+ E Y+T++IVGETGCGKSTQ+PQ+L EAGW A+GR + +TQP A+E+
Sbjct: 66 LVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERG 125
Query: 1755 CILGHDVGYTVRFDDVSDK-DTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNT 1579
+LGH+VGY +RFDD +D T++KF+TDG+L+RE++ DPLL+KYS+IM+DEAHER+ T
Sbjct: 126 AVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYT 185
Query: 1578 DILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPV 1399
DI +GLL+KI + R DLR+IV+SATLDAE F+DFF NET + +DT+ ++VEGRT PV
Sbjct: 186 DIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTSVTLTVEGRTFPV 245
Query: 1398 AVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCD 1219
+ + ++ VPDY ++ VDTV+ IH+ E GDIL FLTGQ+EVE V L E A L
Sbjct: 246 DIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTG 305
Query: 1218 ---RLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKL 1048
L V+P Y LP+ EQMK F+ H RKV+VATN+AE SITI GI YVID G++KL
Sbjct: 306 MKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKL 365
Query: 1047 RAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRC 868
RA + +E L+ V VS+ASA QRAGR GR R GKCYRLY E F++ + TVPE+QR
Sbjct: 366 RAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDQLPQSTVPEMQRS 425
Query: 867 QMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAE 688
+A ILQLKALG+ NV RFH++SPPP+ +M+ LELLYALG +D+ +LT PLG+++AE
Sbjct: 426 NLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAE 485
Query: 687 FPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDH 508
FPL PM +K LL+S FGCS E+++I AMMQIQ+VF+ P Q+ QA + +KFAVEEGDH
Sbjct: 486 FPLNPMFAKMLLESGNFGCSQEVLSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDH 545
Query: 507 MTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINC 328
+TMLNV+ F+++ +S +WC +HF+NY+GL+RA VR QL +LL +F++ KVSS G
Sbjct: 546 LTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKVSSEG---D 602
Query: 327 SENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQD 148
+ + +C+V+GFF+ AA++H +G Y VI+ EV+Q
Sbjct: 603 PDPVLRCIVSGFFANAARFHSSGAYR-------------------------VIYNEVIQT 637
Query: 147 S---IRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 43
S +RDVT IE WL ELAPH+Y+ GT L KR +
Sbjct: 638 SKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAK 675
>gi|34860318|ref|XP_342566.1| similar to Probable ATP-dependent
helicase DDX35 (DEAH-box protein 35) [Rattus norvegicus]
Length = 712
Score = 689 bits (1777), Expect = 0.0
Identities = 352/688 (51%), Positives = 480/688 (69%), Gaps = 14/688 (2%)
Frame = -1
Query: 2094 GPLIFEERSTENAGAAPPIEEQLKVHN-------NPYASLNIQQQRIRLPIFKNRGHILY 1936
GP+ F + TE G + E Q N NPYA+L+I+QQR +LP+FK R HILY
Sbjct: 6 GPVKFWKPGTEGPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILY 65
Query: 1935 MCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXAEEKD 1756
+ E Y+T++IVGETGCGKSTQVPQ AG AD E+
Sbjct: 66 LVENYQTVVIVGETGCGKSTQVPQV---AGRVAD-----------------------ERG 99
Query: 1755 CILGHDVGYTVRFDDVSDK-DTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNT 1579
+LGH+VGY +RFDD +D T++KF+TDG+L+RE++ DPLL+KYS++M+DEAHER+ T
Sbjct: 100 AVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYT 159
Query: 1578 DILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPV 1399
DI +GLL+KI + R DLR+IV+SATLDAE F+DFF NET + +DT I++VEGRT PV
Sbjct: 160 DIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPV 219
Query: 1398 AVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCD 1219
+ + ++ VPDY ++ VDTV+ IH+ E GDIL FLTGQ+EVE V L E A L
Sbjct: 220 DIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTG 279
Query: 1218 ---RLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKL 1048
L V+P Y LP+ EQMK F+ H RKV+VATN+AE SITI GI YVID G++KL
Sbjct: 280 MKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKL 339
Query: 1047 RAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRC 868
RA + +E L+ V VS+ASA QRAGR GR R GKCYRLY E FE+ + TVPE+QR
Sbjct: 340 RAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRS 399
Query: 867 QMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAE 688
+A +LQLKALG+ +V RFH++SPPP+ +M+ LELLYALG +D+ +LT PLG+++AE
Sbjct: 400 NLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAE 459
Query: 687 FPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDH 508
FPL PM +K LL+S FGCS E+++I AMMQIQ+VF+ P Q+ QA + +KFAVEEGDH
Sbjct: 460 FPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDH 519
Query: 507 MTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINC 328
+TMLNV+ F+++ +S +WC +HF+NY+GL+RA VR QL +LL +F++ K+SS G
Sbjct: 520 LTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEG---D 576
Query: 327 SENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQD 148
+ + +C+V+GFF+ AA++H TG Y T+++ +++ +S+++ + P+WVI+ EV+Q
Sbjct: 577 PDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP-ASVLYAEKPPRWVIYNEVIQT 635
Query: 147 S---IRDVTVIEPEWLYELAPHYYEFGT 73
S +RDVT IE WL ELAPH+Y+ GT
Sbjct: 636 SKYYMRDVTAIESAWLLELAPHFYQQGT 663
>gi|50758645|ref|XP_417352.1| PREDICTED: similar to Probable
ATP-dependent helicase DHX35 (DEAH-box protein 35)
[Gallus gallus]
Length = 798
Score = 680 bits (1754), Expect = 0.0
Identities = 352/691 (50%), Positives = 476/691 (67%), Gaps = 14/691 (2%)
Frame = -1
Query: 2073 RSTENAGAAPPIEEQ-------LKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRT 1915
R TE G + E Q + V NPYASL+I+QQR +LP+FK R HILY+ E Y+T
Sbjct: 119 RCTEGPGVSVSEERQSPAESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQT 178
Query: 1914 IIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPXXXXXXXXXXXXAEEKDCILGHDV 1735
++IVGETGCGKSTQ+PQ+L EAGW A+GR + +TQP A+E+ +LGH+V
Sbjct: 179 LVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEV 238
Query: 1734 GYTVRFDDVSDKD-TKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLL 1558
GY +RFDD +D T++K ++L S++M+DEAHER+ TDI +GLL
Sbjct: 239 GYCIRFDDCTDPQATRIKVKQYVVVLE-----------SVLMLDEAHERTLYTDIAIGLL 287
Query: 1557 RKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKT 1378
+KI + R DLR+IV+SATLDAE F+DFF N+TG+ KDT+ I++VEGRT PV + + ++
Sbjct: 288 KKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQS 347
Query: 1377 SVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCD---RLWV 1207
VPDY +S V+T + IH+ EN GDIL FLTGQ+EVE V L E A L L V
Sbjct: 348 PVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRV 407
Query: 1206 VPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAAN 1027
+P Y LP+ +QMK F+ RKV+VATN+AE SITI GI YVID G+VKLRA +
Sbjct: 408 LPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKT 467
Query: 1026 GVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTIL 847
+E L+ V VSKASA QRAGRAGR R GKCYRLY E +FE+ + TVPE+QR +A IL
Sbjct: 468 AIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTVPEMQRSNLAPVIL 527
Query: 846 QLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMH 667
QLKALG+ NV RF +LSPPP+ +M+ LELLYALG +D +LT PLG+++AEFPL PM
Sbjct: 528 QLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMF 587
Query: 666 SKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVF 487
+K LL+S FGCS E++TI AMMQIQ++F+ P Q+ QA +KFAVEEGDH+TMLNV+
Sbjct: 588 AKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVY 647
Query: 486 TKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQC 307
FV++ +S +WC +HF+NY+GL+RA VR QL +LL F++ K SS G + + +C
Sbjct: 648 EAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEG---DPDPVLRC 704
Query: 306 LVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRD 136
+V+GFF+ AA++H TG Y T+++ +++ +S+++ + P+WV++ EV+Q + +RD
Sbjct: 705 IVSGFFANAAKFHSTGAYRTIRDDHELHIHP-TSVLYAEKPPRWVVYNEVIQTAKYYMRD 763
Query: 135 VTVIEPEWLYELAPHYYEFGTEGELAEKRMR 43
VT IE WL ELAPH+Y+ GT L KR +
Sbjct: 764 VTAIESAWLVELAPHFYQQGTHLSLNAKRAK 794