Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y6D11A_2
(906 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25144430|ref|NP_741088.1| actin related protein 2 3 complex 3... 604 e-171
gi|39579728|emb|CAE56478.1| Hypothetical protein CBG24192 [Caeno... 561 e-159
gi|17943202|pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX 431 e-119
gi|5031599|ref|NP_005722.1| actin related protein 2/3 complex su... 429 e-119
gi|30584047|gb|AAP36272.1| Homo sapiens actin related protein 2/... 429 e-119
gi|34876797|ref|XP_217432.2| similar to actin related protein 2/... 429 e-119
gi|23621467|ref|XP_129773.2| actin related protein 2/3 complex, ... 429 e-119
gi|47086645|ref|NP_997864.1| actin related protein 2/3 complex, ... 425 e-118
gi|47220979|emb|CAF98208.1| unnamed protein product [Tetraodon n... 424 e-117
gi|49250419|gb|AAH74622.1| Unknown (protein for MGC:69338) [Xeno... 423 e-117
gi|47506888|gb|AAH70989.1| MGC78865 protein [Xenopus laevis] 421 e-117
gi|19921584|ref|NP_610033.1| CG10954-PA [Drosophila melanogaster... 413 e-114
gi|31239003|ref|XP_319915.1| ENSANGP00000024536 [Anopheles gambi... 386 e-106
gi|31239001|ref|XP_319914.1| ENSANGP00000005273 [Anopheles gambi... 386 e-106
gi|50750876|ref|XP_426598.1| PREDICTED: similar to actin related... 384 e-105
gi|1531594|gb|AAC50874.1| unknown [Homo sapiens] 352 5e-96
gi|7959903|gb|AAF71122.1| PRO2446 [Homo sapiens] 347 2e-94
gi|26361821|dbj|BAB25889.2| unnamed protein product [Mus musculus] 296 3e-79
gi|29841406|gb|AAP06438.1| similar to NM_005731 actin related pr... 266 4e-70
gi|49072326|ref|XP_400452.1| hypothetical protein UM02837.1 [Ust... 254 1e-66
gi|49084496|ref|XP_404443.1| hypothetical protein AN0306.2 [Aspe... 244 2e-63
gi|38048505|gb|AAR10155.1| similar to Drosophila melanogaster Ar... 243 4e-63
gi|12751115|gb|AAK07550.1| PNAS-139 [Homo sapiens] 243 4e-63
gi|50543096|ref|XP_499714.1| hypothetical protein [Yarrowia lipo... 243 6e-63
gi|19114815|ref|NP_593903.1| arp2-3 complex subunit; involved in... 239 6e-62
gi|38104415|gb|EAA50986.1| hypothetical protein MG04745.4 [Magna... 238 1e-61
gi|50257820|gb|EAL20521.1| hypothetical protein CNBE4410 [Crypto... 228 1e-58
gi|32419587|ref|XP_330237.1| hypothetical protein [Neurospora cr... 219 5e-56
gi|10719881|sp|O96623|AR34_DICDI ARP2/3 complex 34 kDa subunit (... 219 5e-56
gi|46125353|ref|XP_387230.1| conserved hypothetical protein [Gib... 215 1e-54
gi|50419051|ref|XP_458048.1| unnamed protein product [Debaryomyc... 198 1e-49
gi|46440226|gb|EAK99534.1| hypothetical protein CaO19.2437 [Cand... 192 9e-48
gi|50288553|ref|XP_446706.1| unnamed protein product [Candida gl... 172 9e-42
gi|6324363|ref|NP_014433.1| Arp complex subunit; Arc35p [Sacchar... 166 5e-40
gi|45200876|ref|NP_986446.1| AGL221Wp [Eremothecium gossypii] >g... 163 6e-39
gi|50310755|ref|XP_455399.1| unnamed protein product [Kluyveromy... 152 1e-35
gi|34911928|ref|NP_917311.1| OSJNBb0006H05.27 [Oryza sativa (jap... 144 2e-33
gi|18397679|ref|NP_564364.1| actin-related protein 2/3 complex 3... 132 8e-30
gi|25403370|pir||B86434 protein T17H7.13 [imported] - Arabidopsi... 104 2e-21
gi|38345318|emb|CAE03391.2| OSJNBa0004N05.15 [Oryza sativa (japo... 86 1e-15
gi|30685673|ref|NP_850208.1| actin-related protein 2/3 complex 3... 86 1e-15
gi|24380341|ref|NP_722296.1| conserved hypothetical protein [Str... 35 1.8
gi|29245933|gb|EAA37549.1| GLP_2_15972_16289 [Giardia lamblia AT... 35 3.0
gi|48836072|ref|ZP_00293069.1| COG0665: Glycine/D-amino acid oxi... 34 3.9
gi|46916161|emb|CAG22930.1| hypothetical protein [Photobacterium... 34 5.1
gi|48096430|ref|XP_394691.1| similar to DEAD (Asp-Glu-Ala-Asp) b... 34 5.1
gi|46981060|emb|CAE82653.1| K88 fimbrial protein AC precursor [E... 33 8.8
gi|17507833|ref|NP_492748.1| putative cytoplasmic protein family... 33 8.8
gi|46981054|emb|CAE82650.1| K88 fimbrial protein AC precursor [E... 33 8.8
gi|2119879|pir||I41318 fimbrial adhesin K88ac precursor - Escher... 33 8.8
gi|120423|sp|P14190|FMKC_ECOLI K88 fimbrial protein AC precursor... 33 8.8
gi|46981086|emb|CAE82666.1| K88 fimbrial protein AC precursor [E... 33 8.8
gi|46981056|emb|CAE82651.1| K88 fimbrial protein AC precursor [E... 33 8.8
gi|46981090|emb|CAE82668.1| K88 fimbrial protein AC precursor [E... 33 8.8
gi|47221459|emb|CAG08121.1| unnamed protein product [Tetraodon n... 33 8.8
>gi|25144430|ref|NP_741088.1| actin related protein 2 3 complex
34kDa (34.5 kD) (3B481) [Caenorhabditis elegans]
gi|16950529|gb|AAL32261.1| Hypothetical protein Y6D11A.2
[Caenorhabditis elegans]
Length = 301
Score = 604 bits (1557), Expect = e-171
Identities = 301/301 (100%), Positives = 301/301 (100%)
Frame = +1
Query: 1 MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS 180
MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS
Sbjct: 1 MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS 60
Query: 181 LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN 360
LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN
Sbjct: 61 LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN 120
Query: 361 CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK 540
CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK
Sbjct: 121 CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK 180
Query: 541 VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD 720
VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD
Sbjct: 181 VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD 240
Query: 721 NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT 900
NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT
Sbjct: 241 NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT 300
Query: 901 Q 903
Q
Sbjct: 301 Q 301