Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y6D11A_2
         (906 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25144430|ref|NP_741088.1| actin related protein 2 3 complex 3...   604   e-171
gi|39579728|emb|CAE56478.1| Hypothetical protein CBG24192 [Caeno...   561   e-159
gi|17943202|pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX    431   e-119
gi|5031599|ref|NP_005722.1| actin related protein 2/3 complex su...   429   e-119
gi|30584047|gb|AAP36272.1| Homo sapiens actin related protein 2/...   429   e-119
gi|34876797|ref|XP_217432.2| similar to actin related protein 2/...   429   e-119
gi|23621467|ref|XP_129773.2| actin related protein 2/3 complex, ...   429   e-119
gi|47086645|ref|NP_997864.1| actin related protein 2/3 complex, ...   425   e-118
gi|47220979|emb|CAF98208.1| unnamed protein product [Tetraodon n...   424   e-117
gi|49250419|gb|AAH74622.1| Unknown (protein for MGC:69338) [Xeno...   423   e-117
gi|47506888|gb|AAH70989.1| MGC78865 protein [Xenopus laevis]          421   e-117
gi|19921584|ref|NP_610033.1| CG10954-PA [Drosophila melanogaster...   413   e-114
gi|31239003|ref|XP_319915.1| ENSANGP00000024536 [Anopheles gambi...   386   e-106
gi|31239001|ref|XP_319914.1| ENSANGP00000005273 [Anopheles gambi...   386   e-106
gi|50750876|ref|XP_426598.1| PREDICTED: similar to actin related...   384   e-105
gi|1531594|gb|AAC50874.1| unknown [Homo sapiens]                      352   5e-96
gi|7959903|gb|AAF71122.1| PRO2446 [Homo sapiens]                      347   2e-94
gi|26361821|dbj|BAB25889.2| unnamed protein product [Mus musculus]    296   3e-79
gi|29841406|gb|AAP06438.1| similar to NM_005731 actin related pr...   266   4e-70
gi|49072326|ref|XP_400452.1| hypothetical protein UM02837.1 [Ust...   254   1e-66
gi|49084496|ref|XP_404443.1| hypothetical protein AN0306.2 [Aspe...   244   2e-63
gi|38048505|gb|AAR10155.1| similar to Drosophila melanogaster Ar...   243   4e-63
gi|12751115|gb|AAK07550.1| PNAS-139 [Homo sapiens]                    243   4e-63
gi|50543096|ref|XP_499714.1| hypothetical protein [Yarrowia lipo...   243   6e-63
gi|19114815|ref|NP_593903.1| arp2-3 complex subunit; involved in...   239   6e-62
gi|38104415|gb|EAA50986.1| hypothetical protein MG04745.4 [Magna...   238   1e-61
gi|50257820|gb|EAL20521.1| hypothetical protein CNBE4410 [Crypto...   228   1e-58
gi|32419587|ref|XP_330237.1| hypothetical protein [Neurospora cr...   219   5e-56
gi|10719881|sp|O96623|AR34_DICDI ARP2/3 complex 34 kDa subunit (...   219   5e-56
gi|46125353|ref|XP_387230.1| conserved hypothetical protein [Gib...   215   1e-54
gi|50419051|ref|XP_458048.1| unnamed protein product [Debaryomyc...   198   1e-49
gi|46440226|gb|EAK99534.1| hypothetical protein CaO19.2437 [Cand...   192   9e-48
gi|50288553|ref|XP_446706.1| unnamed protein product [Candida gl...   172   9e-42
gi|6324363|ref|NP_014433.1| Arp complex subunit; Arc35p [Sacchar...   166   5e-40
gi|45200876|ref|NP_986446.1| AGL221Wp [Eremothecium gossypii] >g...   163   6e-39
gi|50310755|ref|XP_455399.1| unnamed protein product [Kluyveromy...   152   1e-35
gi|34911928|ref|NP_917311.1| OSJNBb0006H05.27 [Oryza sativa (jap...   144   2e-33
gi|18397679|ref|NP_564364.1| actin-related protein 2/3 complex 3...   132   8e-30
gi|25403370|pir||B86434 protein T17H7.13 [imported] - Arabidopsi...   104   2e-21
gi|38345318|emb|CAE03391.2| OSJNBa0004N05.15 [Oryza sativa (japo...    86   1e-15
gi|30685673|ref|NP_850208.1| actin-related protein 2/3 complex 3...    86   1e-15
gi|24380341|ref|NP_722296.1| conserved hypothetical protein [Str...    35   1.8
gi|29245933|gb|EAA37549.1| GLP_2_15972_16289 [Giardia lamblia AT...    35   3.0
gi|48836072|ref|ZP_00293069.1| COG0665: Glycine/D-amino acid oxi...    34   3.9
gi|46916161|emb|CAG22930.1| hypothetical protein [Photobacterium...    34   5.1
gi|48096430|ref|XP_394691.1| similar to DEAD (Asp-Glu-Ala-Asp) b...    34   5.1
gi|46981060|emb|CAE82653.1| K88 fimbrial protein AC precursor [E...    33   8.8
gi|17507833|ref|NP_492748.1| putative cytoplasmic protein family...    33   8.8
gi|46981054|emb|CAE82650.1| K88 fimbrial protein AC precursor [E...    33   8.8
gi|2119879|pir||I41318 fimbrial adhesin K88ac precursor - Escher...    33   8.8
gi|120423|sp|P14190|FMKC_ECOLI K88 fimbrial protein AC precursor...    33   8.8
gi|46981086|emb|CAE82666.1| K88 fimbrial protein AC precursor [E...    33   8.8
gi|46981056|emb|CAE82651.1| K88 fimbrial protein AC precursor [E...    33   8.8
gi|46981090|emb|CAE82668.1| K88 fimbrial protein AC precursor [E...    33   8.8
gi|47221459|emb|CAG08121.1| unnamed protein product [Tetraodon n...    33   8.8


>gi|25144430|ref|NP_741088.1| actin related protein 2 3 complex
           34kDa (34.5 kD) (3B481) [Caenorhabditis elegans]
 gi|16950529|gb|AAL32261.1| Hypothetical protein Y6D11A.2
           [Caenorhabditis elegans]
          Length = 301

 Score =  604 bits (1557), Expect = e-171
 Identities = 301/301 (100%), Positives = 301/301 (100%)
 Frame = +1

Query: 1   MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS 180
           MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS
Sbjct: 1   MIILEQNNRIIVELLEQKFANAKEGGKPESVNVTFADFDGVLYKLSNPDGDRTKIILSIS 60

Query: 181 LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN 360
           LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN
Sbjct: 61  LKFYTELQQHGADDLLRRVYGGHMRSTPEQGFNVTLEYNLADLPADTTDLVQAASALKRN 120

Query: 361 CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK 540
           CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK
Sbjct: 121 CFASVFEKYFEFQEAGQEGHKRAVINYRDDETMYIEAKADRVTVIFSTVFKDADDVIIGK 180

Query: 541 VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD 720
           VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD
Sbjct: 181 VFLQEFREGRKASQTAPAVLYSLGEPPLELKDLPEARVGDNVGYITFVLFPRHTNKKTKD 240

Query: 721 NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT 900
           NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT
Sbjct: 241 NTIDLIHSFRDYLHYHIKCSKVYLHTRMRAKTTDFLKVLNRARPEVKGEKKTFHGRTFQT 300

Query: 901 Q 903
           Q
Sbjct: 301 Q 301




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