Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y71A12B_10
(741 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508687|ref|NP_493435.1| ribosomal Protein, Small subunit (2... 448 e-125
gi|39581465|emb|CAE67995.1| Hypothetical protein CBG13605 [Caeno... 429 e-119
gi|20139890|sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 >gnl|BL... 291 1e-77
gi|50369269|gb|AAH75953.1| Unknown (protein for MGC:92237) [Dani... 290 2e-77
gi|3122817|sp|O01727|RS6_BRAFL 40S ribosomal protein S6 >gnl|BL_... 287 1e-76
gi|19571835|emb|CAD27733.1| S6 ribosomal protein [Paracentrotus ... 286 2e-76
gi|20381196|gb|AAH27620.1| Ribosomal protein S6 [Homo sapiens] 285 5e-76
gi|47214750|emb|CAG01285.1| unnamed protein product [Tetraodon n... 285 5e-76
gi|6677809|ref|NP_033122.1| ribosomal protein S6 [Mus musculus] ... 285 7e-76
gi|15342049|gb|AAH13296.1| Ribosomal protein S6 [Homo sapiens] 285 7e-76
gi|26389925|dbj|BAC25813.1| unnamed protein product [Mus musculus] 283 2e-75
gi|730667|sp|P39017|RS6_XENLA 40S ribosomal protein S6 >gnl|BL_O... 283 3e-75
gi|34785048|gb|AAH09427.2| RPS6 protein [Homo sapiens] 282 4e-75
gi|20139963|sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 >gnl|BL... 282 6e-75
gi|27735388|gb|AAH41281.1| Rps6-prov protein [Xenopus laevis] 282 6e-75
gi|45361031|ref|NP_989152.1| 40S ribosomal protein S6 [Xenopus t... 281 8e-75
gi|20139918|sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 >gnl|BL... 281 1e-74
gi|6601470|gb|AAF18987.1| ribosomal protein S6 [Gallus gallus] 281 1e-74
gi|45382571|ref|NP_990556.1| ribosomal protein S6 [Gallus gallus... 280 2e-74
gi|337516|gb|AAA60288.1| ribosomal protein s6 280 2e-74
gi|48105994|ref|XP_393043.1| similar to ribosomal protein S6 [Ap... 280 3e-74
gi|337514|gb|AAA60287.1| ribosomal protein S6 278 1e-73
gi|38077865|ref|XP_356840.1| similar to 40S ribosomal protein S6... 276 3e-73
gi|17737290|ref|NP_511073.1| CG10944-PB [Drosophila melanogaster... 274 1e-72
gi|28630207|gb|AAN77890.1| ribosomal protein S6 [Scyliorhinus ca... 271 8e-72
gi|24640435|ref|NP_727212.1| CG10944-PC [Drosophila melanogaster... 271 8e-72
gi|44967397|gb|AAS49570.1| ribosomal protein S6 [Protopterus dol... 271 1e-71
gi|2500492|sp|Q94624|RS6_MANSE 40S ribosomal protein S6 >gnl|BL_... 271 1e-71
gi|20139899|sp|Q95V32|RS6_SPOFR 40S ribosomal protein S6 >gnl|BL... 270 2e-71
gi|225901|prf||1403252A ribosomal protein S6 270 3e-71
gi|38082945|ref|XP_123189.2| similar to 40S ribosomal protein S6... 268 9e-71
gi|20885795|ref|XP_125109.1| similar to 40S ribosomal protein S6... 267 1e-70
gi|20139958|sp|Q9U761|RS6_AEDAE 40S ribosomal protein S6 >gnl|BL... 266 3e-70
gi|20139959|sp|Q9U762|RS6_AEDAL 40S ribosomal protein S6 >gnl|BL... 263 2e-69
gi|50258617|gb|EAL21304.1| hypothetical protein CNBD3580 [Crypto... 262 6e-69
gi|44967342|gb|AAS49569.1| ribosomal protein S6 [Latimeria chalu... 259 4e-68
gi|45360889|ref|NP_989120.1| 40S ribosomal protein S6 [Xenopus t... 259 4e-68
gi|29650192|gb|AAO88054.1| ribosomal protein S6 [Anopheles steph... 257 2e-67
gi|20139942|sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 >gnl|BL... 257 2e-67
gi|50556370|ref|XP_505593.1| hypothetical protein [Yarrowia lipo... 257 2e-67
gi|33772503|gb|AAQ54653.1| 40S ribosomal protein S6 [Oikopleura ... 257 2e-67
gi|29841438|gb|AAP06470.1| similar to GenBank Accession Number Z... 256 4e-67
gi|37991906|gb|AAR06352.1| ribosomal protein s6 RPS6-2 [Oryza sa... 255 6e-67
gi|9931636|gb|AAG02240.1| ribosomal protein s6 RPS6-2 [Zea mays] 254 1e-66
gi|7440313|pir||T04334 ribosomal protein S6.1, cytosolic - maize... 254 1e-66
gi|32418138|ref|XP_329547.1| hypothetical protein [Neurospora cr... 254 1e-66
gi|41019561|tpe|CAD89874.1| TPA: ribosomal protein S6 [Anopheles... 254 1e-66
gi|37779084|gb|AAP20202.1| S6 ribosomal protein [Pagrus major] 253 3e-66
gi|34906842|ref|NP_914768.1| putative 40S ribosomal protein S6 [... 252 5e-66
gi|15238142|ref|NP_196598.1| 40S ribosomal protein S6 (RPS6B) [A... 252 5e-66
gi|44662864|gb|AAS47511.1| ribosomal protein S6 [Glycine max] 252 5e-66
gi|31206069|ref|XP_311986.1| ENSANGP00000011100 [Anopheles gambi... 252 6e-66
gi|38090521|ref|XP_122042.2| similar to 40S ribosomal protein S6... 250 2e-65
gi|2224751|emb|CAA74381.1| ribosomal protein S6 [Arabidopsis tha... 250 2e-65
gi|38086535|ref|XP_125431.2| similar to 40S ribosomal protein S6... 250 2e-65
gi|23619351|ref|NP_705313.1| 40S ribosomal subunit protein S6, p... 249 3e-65
gi|15236042|ref|NP_194898.1| 40S ribosomal protein S6 (RPS6A) [A... 249 5e-65
gi|49067970|ref|XP_398274.1| hypothetical protein UM00659.1 [Ust... 246 4e-64
gi|23482704|gb|EAA18609.1| Ribosomal protein S6e, putative [Plas... 246 5e-64
gi|2462694|emb|CAA05029.1| Sr-rip-1 [Strongyloides ratti] 245 6e-64
gi|50411943|ref|XP_457091.1| unnamed protein product [Debaryomyc... 244 1e-63
gi|50289221|ref|XP_447041.1| unnamed protein product [Candida gl... 244 2e-63
gi|1151236|gb|AAB68209.1| Lpg18p 243 3e-63
gi|38105184|gb|EAA51641.1| hypothetical protein MG03236.4 [Magna... 243 4e-63
gi|6319658|ref|NP_009740.1| Protein component of the small (40S)... 242 7e-63
gi|46107502|ref|XP_380810.1| conserved hypothetical protein [Gib... 242 7e-63
gi|1173271|sp|P41798|RS6_KLUMA 40S RIBOSOMAL PROTEIN S6 (S10) >g... 242 7e-63
gi|50310043|ref|XP_455035.1| unnamed protein product [Kluyveromy... 241 1e-62
gi|45201293|ref|NP_986863.1| AGR197Cp [Eremothecium gossypii] >g... 240 2e-62
gi|49088586|ref|XP_406101.1| hypothetical protein AN1964.2 [Aspe... 240 2e-62
gi|2662469|gb|AAB88298.1| ribosomal protein S6 [Arabidopsis thal... 240 3e-62
gi|46811229|gb|AAT01908.1| 40S ribosomal protein S6 [Pseudopleur... 239 3e-62
gi|31415645|gb|AAP46142.1| ribosomal protein S6 [Brassica napus] 238 1e-61
gi|19115050|ref|NP_594138.1| 40S ribosomal protein S6 [Schizosac... 234 1e-60
gi|5921213|emb|CAB56419.1| ribosomal protein S6 [Crocodylus nilo... 234 1e-60
gi|15558812|emb|CAC69540.1| putative ribosomal protein s6 [Elaph... 233 2e-60
gi|19113745|ref|NP_592833.1| 40s ribosomal protein s6 [Schizosac... 233 2e-60
gi|46227971|gb|EAK88891.1| 40S ribosomal protein S6 [Cryptospori... 232 5e-60
gi|6448641|emb|CAB61268.1| putative ribosomal protein s6 [Trache... 232 5e-60
gi|24640437|ref|NP_727213.1| CG10944-PA [Drosophila melanogaster... 232 7e-60
gi|49203284|emb|CAD43214.1| putative 40S ribosomal protein S6 [K... 222 7e-57
gi|38048337|gb|AAR10071.1| similar to Drosophila melanogaster Rp... 219 5e-56
gi|46444722|gb|EAL03995.1| hypothetical protein CaO19.4660 [Cand... 214 2e-54
gi|3413170|emb|CAA09042.1| 40S ribosomal protein S6 [Cicer ariet... 209 5e-53
gi|32400997|gb|AAP80704.1| 40S ribosome protein S8 [Griffithsia ... 197 2e-49
gi|2350928|dbj|BAA21993.1| ribosomal protein S6 [Entamoeba histo... 186 4e-46
gi|29246372|gb|EAA37971.1| GLP_64_20707_19961 [Giardia lamblia A... 179 4e-44
gi|4388624|emb|CAB05860.1| ribosomal protein S6 [Strongylocentro... 173 3e-42
gi|7440310|pir||S26078 ribosomal protein S6, cytosolic - common ... 169 6e-41
gi|20139945|sp|Q9NE83|RS6_LEIMA 40S ribosomal protein S6 >gnl|BL... 168 1e-40
gi|7440311|pir||JE0265 S6 ribosomal protein - Leishmania infantum 168 1e-40
gi|2507328|sp|P29345|RS6_TOBAC 40S RIBOSOMAL PROTEIN S6 167 3e-40
gi|6094190|sp|O44012|RS6_LEIIN 40S RIBOSOMAL PROTEIN S6 >gnl|BL_... 166 4e-40
gi|158229|gb|AAB05983.1| sequence coding for an alternate protei... 165 8e-40
gi|29650199|gb|AAO88055.1| ribosomal protein S6 [Telmatoscopus s... 162 7e-39
gi|20022|emb|CAA48187.1| ribosomal protein S6 [Nicotiana tabacum] 157 2e-37
gi|13811978|ref|NP_113107.1| 40S ribosomal protein S6 [Guillardi... 149 5e-35
gi|1480022|dbj|BAA11393.1| putative ribosomal protein [Brassica ... 146 4e-34
gi|21724191|gb|AAM28345.1| RPS6 [Culicoides sonorensis] 143 4e-33
gi|12751055|gb|AAK07522.1| PNAS-20 [Homo sapiens] 114 2e-24
gi|19173606|ref|NP_597409.1| 40S RIBOSOMAL PROTEIN S6 [Encephali... 110 2e-23
gi|34865969|ref|XP_345977.1| similar to ribosomal protein S6 [Ra... 88 2e-16
gi|6010012|emb|CAB56194.2| Ribosomal protein S6 [Cercopithecus a... 85 1e-15
gi|42656928|ref|XP_376327.1| hypothetical protein XP_376327 [Hom... 82 1e-14
gi|15678288|ref|NP_275403.1| ribosomal protein S6 [Methanothermo... 67 3e-10
gi|20094882|ref|NP_614729.1| Ribosomal protein S6E (S10) [Methan... 64 4e-09
gi|45549336|ref|NP_572418.2| CG11386-PA [Drosophila melanogaster... 61 3e-08
gi|48477663|ref|YP_023369.1| small subunit ribosomal protein S6E... 58 2e-07
gi|14521633|ref|NP_127109.1| SSU ribosomal protein S6E [Pyrococc... 57 3e-07
gi|14590508|ref|NP_142576.1| 30S ribosomal protein S6E [Pyrococc... 57 4e-07
gi|11498122|ref|NP_069347.1| SSU ribosomal protein S6E (rps6E) [... 56 7e-07
gi|16082513|ref|NP_393803.1| 30S ribosomal protein S6E [Thermopl... 56 9e-07
gi|48852211|ref|ZP_00306401.1| COG2125: Ribosomal protein S6E (S... 56 9e-07
gi|20140255|sp|Q9HLA6|RS6E_THEAC 30S ribosomal protein S6e >gnl|... 56 9e-07
gi|45358770|ref|NP_988327.1| Ribosomal protein S6e [Methanococcu... 55 2e-06
gi|13542106|ref|NP_111794.1| 30S ribosomal protein S6E [Thermopl... 54 3e-06
gi|18976860|ref|NP_578217.1| SSU ribosomal protein S6E [Pyrococc... 53 6e-06
gi|15669446|ref|NP_248256.1| SSU ribosomal protein S6E [Methanoc... 53 6e-06
gi|104271|pir||A40186 ribosomal protein S6 - clawed frog (fragme... 53 8e-06
gi|15791272|ref|NP_281096.1| 30S ribosomal protein S6E; Rps6e [H... 51 2e-05
gi|38077078|ref|XP_357320.1| similar to 40S ribosomal protein S6... 50 5e-05
gi|15897344|ref|NP_341949.1| SSU ribosomal protein S6E (rps6E) [... 48 2e-04
gi|20140151|sp|Q975N7|RS6E_SULTO 30S ribosomal protein S6e 47 5e-04
gi|15920585|ref|NP_376254.1| 141aa long hypothetical 30S ribosom... 47 5e-04
gi|14602024|ref|NP_148569.1| 30S ribosomal protein S6 [Aeropyrum... 46 7e-04
gi|38073515|ref|XP_357133.1| similar to 40S ribosomal protein S6... 45 0.002
gi|20090385|ref|NP_616460.1| ribosomal protein S6e [Methanosarci... 41 0.030
gi|18312675|ref|NP_559342.1| ribosomal protein S6 [Pyrobaculum a... 41 0.030
gi|21228564|ref|NP_634486.1| SSU ribosomal protein S6E [Methanos... 40 0.039
gi|38047803|gb|AAR09804.1| similar to Drosophila melanogaster Rp... 40 0.039
gi|41149852|ref|XP_372482.1| similar to 40S ribosomal protein S6... 40 0.066
gi|32410635|ref|XP_325798.1| hypothetical protein [Neurospora cr... 38 0.25
gi|31873103|emb|CAD98731.1| Hypothetical protein F32B4.4b [Caeno... 37 0.33
gi|17507059|ref|NP_492945.1| RNA-binding region RNP-1 (1M119) [C... 37 0.33
gi|41720214|ref|ZP_00149027.1| COG2125: Ribosomal protein S6E (S... 37 0.56
gi|38103775|gb|EAA50436.1| hypothetical protein MG04195.4 [Magna... 36 0.73
gi|23121552|ref|ZP_00103808.1| COG1020: Non-ribosomal peptide sy... 34 2.8
gi|15228908|ref|NP_188934.1| F-box family protein-related [Arabi... 34 2.8
gi|28558932|ref|NP_788192.1| RC205 [Ruegeria sp. PR1b] >gnl|BL_O... 34 3.6
gi|46432795|gb|EAK92262.1| hypothetical protein CaO19.5498 [Cand... 34 3.6
gi|16305113|gb|AAL16979.1| 50kD gamma zein [Zea mays] 34 3.6
gi|24308177|ref|NP_060439.1| hypothetical protein FLJ10006 [Homo... 34 3.6
gi|41054625|ref|NP_955870.1| splicing factor, arginine/serine-ri... 34 3.6
gi|41614902|ref|NP_963400.1| NEQ105 [Nanoarchaeum equitans Kin4-... 34 3.6
gi|48854997|ref|ZP_00309157.1| COG0855: Polyphosphate kinase [Cy... 34 3.6
gi|50550665|ref|XP_502805.1| hypothetical protein [Yarrowia lipo... 33 6.2
gi|49077402|ref|XP_402565.1| hypothetical protein UM04950.1 [Ust... 33 6.2
gi|45359070|ref|NP_988627.1| pyruvate oxidoreductase (synthase) ... 33 8.1
gi|9651770|gb|AAF91262.1| pyruvate oxidoreductase delta subunit ... 33 8.1
gi|860970|emb|CAA60698.1| HP8 peptide [Homo sapiens] 33 8.1
gi|1082465|pir||S54834 HP8 peptide - human (fragment) 33 8.1
gi|34853091|ref|XP_342392.1| inositol polyphosphate 5-phosphatas... 33 8.1
gi|21739669|emb|CAD38875.1| hypothetical protein [Homo sapiens] 33 8.1
gi|40806973|gb|AAH65279.1| FLJ10006 protein [Homo sapiens] 33 8.1
gi|23105132|ref|ZP_00091590.1| COG1186: Protein chain release fa... 33 8.1
gi|17553336|ref|NP_497176.1| ankyrin (3A811) [Caenorhabditis ele... 33 8.1
>gi|17508687|ref|NP_493435.1| ribosomal Protein, Small subunit (28.1
kD) (rps-6) [Caenorhabditis elegans]
gi|7320819|emb|CAB81996.1| Hypothetical protein Y71A12B.1
[Caenorhabditis elegans]
Length = 246
Score = 448 bits (1152), Expect = e-125
Identities = 225/225 (100%), Positives = 225/225 (100%)
Frame = +1
Query: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 180
MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 181 FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE 360
FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE 120
Query: 361 IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTIAPKIQRLI 540
IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTIAPKIQRLI
Sbjct: 121 IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTIAPKIQRLI 180
Query: 541 TPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAKI 675
TPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAKI
Sbjct: 181 TPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAKI 225