Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y76B12C_1
(759 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17544226|ref|NP_500151.1| putative prenylated nuclear protein... 91 3e-17
gi|9837383|gb|AAG00553.1| retinitis pigmentosa GTPase regulator ... 41 0.024
gi|46228936|gb|EAK89785.1| hypothetical protein with signal pept... 39 0.090
gi|32398688|emb|CAD98648.1| retinitis pigmentosa GTPase regulato... 39 0.090
gi|9837381|gb|AAG00552.1| retinitis pigmentosa GTPase regulator ... 38 0.20
gi|15228477|ref|NP_189519.1| expressed protein [Arabidopsis thal... 37 0.34
gi|10140993|ref|NP_065570.1| putative immediate early protein [A... 37 0.45
gi|30526291|gb|AAP32203.1| latency associated nuclear antigen [S... 36 1.00
gi|37532950|ref|NP_920777.1| hypothetical protein [Oryza sativa ... 36 1.00
gi|30348579|emb|CAC84371.1| hypothetical protein [Saimiriine her... 35 1.3
gi|9837379|gb|AAG00551.1| retinitis pigmentosa GTPase regulator ... 35 1.3
gi|17566482|ref|NP_507901.1| plasmodium falciparum trophozoite a... 35 1.3
gi|20452161|gb|AAM22073.1| retinitis pigmentosa GTPase regulator... 34 2.9
gi|23490690|gb|EAA22406.1| hypothetical protein [Plasmodium yoel... 33 5.0
gi|37498977|gb|AAQ91579.1| collagen-like protein 3 [Streptococcu... 33 5.0
gi|49388905|dbj|BAD26130.1| hypothetical protein [Oryza sativa (... 33 5.0
gi|32477297|ref|NP_870291.1| putative ATP-dependent RNA helicase... 33 5.0
gi|21361025|gb|AAM49782.1| DEAD-box RNA helicase [Drosophila vir... 33 5.0
gi|37498968|gb|AAQ91575.1| collagen-like protein 3 [Streptococcu... 33 6.5
gi|345616|pir||B44841 low molecular weight neurofilament protein... 33 6.5
gi|548352|sp|P35616|NFL_XENLA Neurofilament triplet L protein (N... 33 6.5
gi|19074606|ref|NP_586112.1| hypothetical protein [Encephalitozo... 33 6.5
gi|19075009|ref|NP_586515.1| hypothetical protein [Encephalitozo... 33 6.5
gi|45550403|ref|NP_610577.2| CG12907-PA [Drosophila melanogaster... 33 8.5
gi|13540523|ref|NP_110390.1| nucleosomal binding protein 1 [Homo... 33 8.5
>gi|17544226|ref|NP_500151.1| putative prenylated nuclear protein,
with 2 coiled coil-4 domains (4C736) [Caenorhabditis
elegans]
gi|7105679|gb|AAF36065.1| Hypothetical protein Y76B12C.4
[Caenorhabditis elegans]
Length = 252
Score = 90.5 bits (223), Expect = 3e-17
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = -1
Query: 759 MEAHRAEQPQCTKSGKVILKPGYDMTDGLSEIDDWAXXXXXXXXXXXXXPREGPKLID 586
MEAHRAEQPQCTKSGKVILKPGYDMTDGLSEIDDWA PREGPKLID
Sbjct: 1 MEAHRAEQPQCTKSGKVILKPGYDMTDGLSEIDDWAPEKKKRAKKVPSKPREGPKLID 58
Score = 53.5 bits (127), Expect = 5e-06
Identities = 42/121 (34%), Positives = 42/121 (34%)
Frame = -1
Query: 366 APREKETMEKKQKSKDEDEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDXXXXXXXX 187
APREKETMEKKQKSKDEDEGD KID
Sbjct: 132 APREKETMEKKQKSKDEDEGDLSKEEILKIKKALKKEKKLRDRERLKTEKIDKSTETKNS 191
Query: 186 XXXXXXXXXXXXXXXXXEAAVATGTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXKVCCTI 7
EAAVATGTSGS KVCCTI
Sbjct: 192 TTPSTEKEKSSMKKTKKEAAVATGTSGSAKKKVRPPAPPPPPTKRKPKDIRAKKKVCCTI 251
Query: 6 L 4
L
Sbjct: 252 L 252