Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= ZC302_1
(2319 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17562716|ref|NP_505736.1| yeast MRE recombination/repair homo... 1436 0.0
gi|39593405|emb|CAE64875.1| Hypothetical protein CBG09687 [Caeno... 997 0.0
gi|3912938|gb|AAC78721.1| MRE11 homologue hMre11 [Homo sapiens] 364 4e-99
gi|5031923|ref|NP_005582.1| meiotic recombination 11 homolog A i... 364 6e-99
gi|24234690|ref|NP_005581.2| meiotic recombination 11 homolog A ... 364 6e-99
gi|26334321|dbj|BAC30878.1| unnamed protein product [Mus musculus] 362 2e-98
gi|9055282|ref|NP_061206.1| meiotic recombination 11 homolog A [... 362 2e-98
gi|11560107|ref|NP_071615.1| MRE11 [Rattus norvegicus] >gnl|BL_O... 362 3e-98
gi|18203566|sp|Q9W6K1|MR11_XENLA Double-strand break repair prot... 356 2e-96
gi|47777304|ref|NP_001001407.1| zgc:64018 [Danio rerio] >gnl|BL_... 354 6e-96
gi|45382139|ref|NP_990109.1| Mre11 [Gallus gallus] >gnl|BL_ORD_I... 343 8e-93
gi|47225061|emb|CAF97476.1| unnamed protein product [Tetraodon n... 338 3e-91
gi|1401337|gb|AAB03664.1| Mre11b 332 3e-89
gi|38107661|gb|EAA53805.1| hypothetical protein MG09555.4 [Magna... 330 1e-88
gi|22775416|dbj|BAC11859.1| recombinational repair protein [Magn... 327 6e-88
gi|32172459|sp|Q9C291|MR11_NEUCR Double-strand break repair prot... 327 1e-87
gi|32420807|ref|XP_330847.1| hypothetical protein ( (AB002530) m... 322 3e-86
gi|50424913|ref|XP_461047.1| unnamed protein product [Debaryomyc... 318 4e-85
gi|3434965|dbj|BAA32417.1| mus-23 [Neurospora crassa] 317 6e-85
gi|19113847|ref|NP_592935.1| dna repair protein rad32 [Schizosac... 313 9e-84
gi|17647663|ref|NP_523547.1| CG16928-PA [Drosophila melanogaster... 313 1e-83
gi|46109634|ref|XP_381875.1| hypothetical protein FG01699.1 [Gib... 311 4e-83
gi|809603|emb|CAA57765.1| rad32 [Schizosaccharomyces pombe] 311 6e-83
gi|50305097|ref|XP_452507.1| unnamed protein product [Kluyveromy... 310 8e-83
gi|45199071|ref|NP_986100.1| AFR553Cp [Eremothecium gossypii] >g... 310 1e-82
gi|49085088|ref|XP_404693.1| hypothetical protein AN0556.2 [Aspe... 308 3e-82
gi|26422653|gb|AAN78297.1| meiotic recombination protein [Emeric... 308 3e-82
gi|31200005|ref|XP_308950.1| ENSANGP00000013179 [Anopheles gambi... 306 1e-81
gi|46433877|gb|EAK93304.1| hypothetical protein CaO19.6915 [Cand... 305 2e-81
gi|9857264|dbj|BAB11924.1| Mre11 [Bombyx mori] 303 9e-81
gi|15239601|ref|NP_200237.1| DNA repair and meiosis protein (Mre... 302 2e-80
gi|38344808|emb|CAE03009.2| OSJNBa0043L09.28 [Oryza sativa (japo... 302 3e-80
gi|18203515|sp|Q9UVN9|MR11_COPCI Double-strand break repair prot... 291 5e-77
gi|38636804|dbj|BAD03045.1| putative DNA repair and meiosis prot... 283 1e-74
gi|49076758|ref|XP_402319.1| hypothetical protein UM04704.1 [Ust... 280 1e-73
gi|50258005|gb|EAL20699.1| hypothetical protein CNBE0640 [Crypto... 279 2e-73
gi|6323880|ref|NP_013951.1| Subunit of a complex with Rad50p and... 276 1e-72
gi|2209265|gb|AAB61454.1| Mre11p [Saccharomyces cerevisiae] 276 2e-72
gi|50546839|ref|XP_500889.1| hypothetical protein [Yarrowia lipo... 276 2e-72
gi|50294834|ref|XP_449828.1| unnamed protein product [Candida gl... 274 6e-72
gi|18844723|gb|AAL78283.1| DNA repair protein Mre11 [Trypanosoma... 243 1e-62
gi|18496098|emb|CAD20051.1| Mre11 protein [Trypanosoma brucei] 243 1e-62
gi|33944779|ref|XP_340537.1| endo/exonuclease Mre11, putative [T... 243 2e-62
gi|48138014|ref|XP_396844.1| similar to ENSANGP00000013179 [Apis... 232 3e-59
gi|19173668|ref|NP_597471.1| DOUBLE-STRAND BREAK DNA REPAIR PROT... 224 7e-57
gi|30584769|gb|AAP36637.1| Homo sapiens MRE11 meiotic recombinat... 205 3e-51
gi|13528888|gb|AAH05241.1| MRE11A protein [Homo sapiens] >gnl|BL... 205 3e-51
gi|30578209|gb|AAP35101.1| Mre11 [Entamoeba histolytica] 162 3e-38
gi|23613437|ref|NP_703281.1| DNA repair exonuclease, putative [P... 154 9e-36
gi|23482324|gb|EAA18338.1| rad32-related [Plasmodium yoelii yoelii] 140 1e-31
gi|18977538|ref|NP_578895.1| exonuclease putative [Pyrococcus fu... 55 6e-06
gi|14488686|pdb|1II7|A Chain A, Crystal Structure Of P. Furiosus... 54 1e-05
gi|49036430|sp|Q8U1N9|MR11_PYRFU DNA double-strand break repair ... 54 1e-05
gi|14590783|ref|NP_142853.1| hypothetical protein PH0930 [Pyroco... 50 2e-04
gi|14521424|ref|NP_126900.1| dna repair protein rad32 [Pyrococcu... 50 2e-04
gi|42780185|ref|NP_977432.1| DNA repair exonuclease family prote... 50 3e-04
gi|20090029|ref|NP_616104.1| DNA repair exonuclease [Methanosarc... 49 4e-04
gi|29247465|gb|EAA39026.1| GLP_90_7352_9805 [Giardia lamblia ATC... 49 4e-04
gi|47564979|ref|ZP_00236023.1| phosphoesterase [Bacillus cereus ... 49 5e-04
gi|11498636|ref|NP_069864.1| DNA repair protein RAD32 (rad32) [A... 48 0.001
gi|21398948|ref|NP_654933.1| DNA_repair, DNA repair exonuclease ... 48 0.001
gi|30261132|ref|NP_843509.1| DNA repair exonuclease family prote... 48 0.001
gi|30019174|ref|NP_830805.1| phosphoesterase [Bacillus cereus AT... 46 0.003
gi|21228295|ref|NP_634217.1| DNA repair protein [Methanosarcina ... 46 0.003
gi|49477051|ref|YP_035270.1| DNA repair exonuclease [Bacillus th... 45 0.006
gi|29246994|gb|EAA38571.1| GLP_725_40444_39620 [Giardia lamblia ... 45 0.006
gi|15614945|ref|NP_243248.1| BH2382~unknown conserved protein in... 44 0.017
gi|16803686|ref|NP_465171.1| similar to putative exonucleases Sb... 44 0.022
gi|47097001|ref|ZP_00234575.1| exonuclease SbcD, putative [Liste... 44 0.022
gi|41720500|ref|ZP_00149313.1| COG0420: DNA repair exonuclease [... 43 0.029
gi|48840101|ref|ZP_00297029.1| COG0420: DNA repair exonuclease [... 43 0.029
gi|15606914|ref|NP_214295.1| ATP-dependent dsDNA exonuclease [Aq... 43 0.038
gi|15678569|ref|NP_275684.1| Rad32 related protein [Methanotherm... 42 0.050
gi|49036102|sp|P62130|MR11_HALVO DNA double-strand break repair ... 42 0.050
gi|15673304|ref|NP_267478.1| exonuclease [Lactococcus lactis sub... 42 0.065
gi|46907875|ref|YP_014264.1| exonuclease SbcD, putative [Listeri... 42 0.065
gi|16800755|ref|NP_471023.1| similar to putative exonucleases Sb... 42 0.065
gi|33151917|ref|NP_873270.1| 3-prime,5-prime cyclic nucleotide p... 42 0.065
gi|48846040|ref|ZP_00300308.1| COG0420: DNA repair exonuclease [... 41 0.15
gi|29377170|ref|NP_816324.1| exonuclease SbcD [Enterococcus faec... 40 0.19
gi|14600458|ref|NP_146973.1| hypothetical protein APE0113 [Aerop... 40 0.25
gi|30022417|ref|NP_834048.1| RNA polymerase sigma-K factor [Baci... 40 0.25
gi|42783467|ref|NP_980714.1| RNA polymerase sigma-27 factor [Bac... 40 0.25
gi|47569335|ref|ZP_00240019.1| RNA polymerase sigma-K factor [Ba... 40 0.25
gi|23113372|ref|ZP_00098753.1| COG0420: DNA repair exonuclease [... 40 0.25
gi|21402384|ref|NP_658369.1| sigma70, Sigma-70 factor [Bacillus ... 40 0.25
gi|49236381|ref|ZP_00330441.1| COG0420: DNA repair exonuclease [... 40 0.32
gi|23128837|ref|ZP_00110676.1| COG0420: DNA repair exonuclease [... 40 0.32
gi|27377035|ref|NP_768564.1| bll1924 [Bradyrhizobium japonicum U... 39 0.55
gi|17231955|ref|NP_488503.1| hypothetical protein [Nostoc sp. PC... 39 0.55
gi|48892122|ref|ZP_00325534.1| COG0420: DNA repair exonuclease [... 39 0.72
gi|39996522|ref|NP_952473.1| nuclease SbcCD, D subunit, putative... 38 0.94
gi|48895535|ref|ZP_00328519.1| COG1409: Predicted phosphohydrola... 38 1.2
gi|48826246|ref|ZP_00287468.1| COG0420: DNA repair exonuclease [... 38 1.2
gi|13487828|ref|NP_108706.1| unknown [Bacteriophage Tuc2009] >gn... 37 1.6
gi|49036426|sp|Q8NKQ0|MR11_SULAC DNA double-strand break repair ... 37 1.6
gi|46203886|ref|ZP_00050834.2| hypothetical protein Magn024798 [... 37 1.6
gi|28378258|ref|NP_785150.1| exonuclease SbcD [Lactobacillus pla... 37 1.6
gi|45523840|ref|ZP_00175167.1| COG0420: DNA repair exonuclease [... 37 1.6
gi|15895994|ref|NP_349343.1| DNA repair exonuclease [Clostridium... 37 2.1
gi|15611448|ref|NP_223099.1| putative [Helicobacter pylori J99] ... 37 2.1
gi|46578487|ref|YP_009295.1| Ser/Thr protein phosphatase family ... 37 2.1
gi|50290659|ref|XP_447762.1| unnamed protein product [Candida gl... 37 2.7
gi|48696460|ref|YP_024502.1| ORF72 [Staphylococcus phage K] >gnl... 37 2.7
gi|15805195|ref|NP_293882.1| branched-chain amino acid dehydroge... 37 2.7
gi|29349547|ref|NP_813050.1| conserved hypothetical protein, wit... 36 3.6
gi|15644383|ref|NP_229435.1| exonuclease, putative [Thermotoga m... 36 3.6
gi|15922433|ref|NP_378102.1| 387aa long conserved hypothetical p... 36 4.7
gi|20094128|ref|NP_613975.1| DNA repair exonuclease of the SbcD/... 36 4.7
gi|23619455|ref|NP_705417.1| hypothetical protein [Plasmodium fa... 36 4.7
gi|50760975|ref|XP_418199.1| PREDICTED: similar to Adapter-relat... 35 6.1
gi|15789740|ref|NP_279564.1| phosphoesterase; Ppe [Halobacterium... 35 8.0
gi|23003036|ref|ZP_00046706.1| COG0420: DNA repair exonuclease [... 35 8.0
gi|46204695|ref|ZP_00049604.2| COG0420: DNA repair exonuclease [... 35 8.0
>gi|17562716|ref|NP_505736.1| yeast MRE recombination/repair homolog
(mre-11) [Caenorhabditis elegans]
gi|34922475|sp|Q23255|MR11_CAEEL Double-strand break repair protein
mre-11
gi|7510676|pir||T27512 hypothetical protein ZC302.1 - Caenorhabditis
elegans
gi|3881390|emb|CAA98292.1| Hypothetical protein ZC302.1
[Caenorhabditis elegans]
Length = 772
Score = 1436 bits (3716), Expect = 0.0
Identities = 726/772 (94%), Positives = 726/772 (94%)
Frame = -1
Query: 2319 MSATGKVSRPIQVFTRANYFFKLIFQFKVRKYNSLTVERIFIRAMCGXXXXXXXFVPDSQ 2140
MSATGKVSRPIQVFTRANYFFKLIFQFKVRKYNSLTVERIFIRAMCG FVPDSQ
Sbjct: 1 MSATGKVSRPIQVFTRANYFFKLIFQFKVRKYNSLTVERIFIRAMCGSDDSFDDFVPDSQ 60
Query: 2139 EPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHC 1960
EPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHC
Sbjct: 61 EPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHC 120
Query: 1959 GYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYC 1780
GYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYC
Sbjct: 121 GYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYC 180
Query: 1779 LNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLL 1600
LNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLL
Sbjct: 181 LNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLL 240
Query: 1599 HESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPN 1420
HESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPN
Sbjct: 241 HESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPN 300
Query: 1419 AGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSE 1240
AGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSE
Sbjct: 301 AGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSE 360
Query: 1239 AVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLD 1060
AVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLD
Sbjct: 361 AVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLD 420
Query: 1059 KIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRRPRQPELPLIRLKVIYD 880
KIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRRPRQPELPLIRLKVIYD
Sbjct: 421 KIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRRPRQPELPLIRLKVIYD 480
Query: 879 GDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQV 700
GDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQV
Sbjct: 481 GDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQV 540
Query: 699 SATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGGLATSANRNFDSCLMHQ 520
SATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGGLATSANRNFDSCLMHQ
Sbjct: 541 SATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGGLATSANRNFDSCLMHQ 600
Query: 519 IDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVAXXXXXXXXXDP 340
IDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVA DP
Sbjct: 601 IDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVADVEMEEDEDDP 660
Query: 339 QYYMPPQSTSRTNYASGSEDEVANSDEEMGSSISRHSKQPXXXXXXXXXXXXXXXXXXXX 160
QYYMPPQSTSRTNYASGSEDEVANSDEEMGSSISRHSKQP
Sbjct: 661 QYYMPPQSTSRTNYASGSEDEVANSDEEMGSSISRHSKQPTTRGRGRGARGAGASRETTR 720
Query: 159 XRSNKVVSTRQIDSDGFEIINDXXXXXXXXXSTRGKARGKSAPSKKRDLSFF 4
RSNKVVSTRQIDSDGFEIIND STRGKARGKSAPSKKRDLSFF
Sbjct: 721 GRSNKVVSTRQIDSDGFEIINDSPSPPPASRSTRGKARGKSAPSKKRDLSFF 772
>gi|39593405|emb|CAE64875.1| Hypothetical protein CBG09687
[Caenorhabditis briggsae]
Length = 725
Score = 997 bits (2577), Expect = 0.0
Identities = 520/733 (70%), Positives = 584/733 (78%), Gaps = 5/733 (0%)
Frame = -1
Query: 2187 MCGXXXXXXXFVPDSQEPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHD 2008
MCG FV +SQEP SSR R +D EVPCSQRPDAA+DTMVE+L++ D P D
Sbjct: 1 MCGSDDSFEEFVAESQEPTSSRRRVHS-TNDSEVPCSQRPDAAHDTMVENLEDEDLPVRD 59
Query: 2007 ESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNP 1828
E +D+IKILVA DIHCGYGENK IHMDAVNTFEEVLQIATEQ VDMILLGGDLFHENNP
Sbjct: 60 EPDDVIKILVA-DIHCGYGENKPIIHMDAVNTFEEVLQIATEQHVDMILLGGDLFHENNP 118
Query: 1827 SREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHG 1648
SREVQHRVTQLLRQYCLN PIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHG
Sbjct: 119 SREVQHRVTQLLRQYCLNEKPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHG 178
Query: 1647 NHDDLSGKGLTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDR 1468
NHDDLSGKGLTALDLLHE+GL+NLFGKHS I+EFI+SPILLRKGETRLALYG+GSQRDDR
Sbjct: 179 NHDDLSGKGLTALDLLHEAGLINLFGKHSTIEEFIISPILLRKGETRLALYGLGSQRDDR 238
Query: 1467 LVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWG 1288
LVRAFK +I+FLRPNAGAEDWFNLFVLHQNRPRRA+HRSTGNFLPE+LIPQFFDLLIWG
Sbjct: 239 LVRAFKEENITFLRPNAGAEDWFNLFVLHQNRPRRAVHRSTGNFLPETLIPQFFDLLIWG 298
Query: 1287 HEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPI 1108
HEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLT EEALQKNAF+IKIKGRKFASKPI
Sbjct: 299 HEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTAEEALQKNAFVIKIKGRKFASKPI 358
Query: 1107 PLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRR 928
PL+TVR MVCDELLLDKIPPGSRP+ K++RPK DGRYIDEIAIE K+ EMI A R
Sbjct: 359 PLKTVRQMVCDELLLDKIPPGSRPVTKSERPKTRDGRYIDEIAIEVKLKEMIAKATENRG 418
Query: 927 PRQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQT 748
PRQPELPLIRLKVIYDGDWL++TPANAKRIGLRYEN+VANAVDMV IKKN + + +T
Sbjct: 419 PRQPELPLIRLKVIYDGDWLHVTPANAKRIGLRYENIVANAVDMVSIKKNEPKTKRRKET 478
Query: 747 ENEKNITEMADEMGQVSATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGG 568
E ++ ++ G VS NLQ+IINDYF +PL +QMTVLKP GIG+AL+QYS IEEGG
Sbjct: 479 EG----NDVPEDFGNVSVANLQSIINDYFTQKPLDEQMTVLKPFGIGKALDQYSEIEEGG 534
Query: 567 LATSANRNFDSCLMHQIDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERF 388
A +ANRNFD+ LM+QI+VVR LKKMPLPPI+D SDL+ F DLI KDL+DMK+ +SE+
Sbjct: 535 TAAAANRNFDASLMNQINVVRSMLKKMPLPPIDDSSDLNGFHDLIVKDLFDMKRTESEKS 594
Query: 387 KNPV-AXXXXXXXXXDPQYYMPPQSTSRTNYASG-SEDEVANSDEEMGSSISRHSKQPXX 214
NP+ A D Q+Y+ PQS S TN+ G +D+ +SDE+ + SR SK P
Sbjct: 595 GNPISAPGMEEDEDNDSQFYIQPQS-SVTNFNDGDDDDQFMDSDEDPIIANSRSSK-PST 652
Query: 213 XXXXXXXXXXXXXXXXXXXRSNKVVSTRQIDS--DGFEIINDXXXXXXXXXSTRGKARGK 40
++ K S DS DGF +IND + RG+ RGK
Sbjct: 653 SRGRGRGSRGNTVRGSTRGKAAKSTSRPNPDSDDDGFIVINDSPSPPPASRTARGRGRGK 712
Query: 39 -SAPSKKRDLSFF 4
+ SKKRD+SFF
Sbjct: 713 TTTTSKKRDISFF 725