Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= ZC373_7
         (894 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17570601|ref|NP_509692.1| COLlagen structural gene (28.7 kD) ...   247   2e-64
gi|39590997|emb|CAE58777.1| Hypothetical protein CBG01972 [Caeno...   227   3e-58
gi|17540622|ref|NP_502116.1| predicted CDS, COLlagen structural ...   179   6e-44
gi|17540620|ref|NP_502115.1| COLlagen structural gene (col-126) ...   179   6e-44
gi|25150119|ref|NP_505374.2| COLlagen structural gene (col-144) ...   177   3e-43
gi|17559056|ref|NP_505376.1| COLlagen structural gene (col-10) [...   177   3e-43
gi|39594542|emb|CAE72120.1| Hypothetical protein CBG19216 [Caeno...   177   3e-43
gi|17557220|ref|NP_505647.1| COLlagen structural gene (col-150) ...   176   5e-43
gi|39593314|emb|CAE64784.1| Hypothetical protein CBG09577 [Caeno...   174   2e-42
gi|39593742|emb|CAE62035.1| Hypothetical protein CBG06051 [Caeno...   172   7e-42
gi|39594543|emb|CAE72121.1| Hypothetical protein CBG19217 [Caeno...   171   2e-41
gi|17557278|ref|NP_505375.1| COLlagen structural gene (28.8 kD) ...   171   3e-41
gi|17553070|ref|NP_497975.1| COLlagen structural gene (28.9 kD) ...   164   2e-39
gi|39593313|emb|CAE64783.1| Hypothetical protein CBG09576 [Caeno...   161   2e-38
gi|17557218|ref|NP_505646.1| COLlagen structural gene (30.6 kD) ...   159   6e-38
gi|39591564|emb|CAE71140.1| Hypothetical protein CBG17995 [Caeno...   158   2e-37
gi|39583705|emb|CAE63809.1| Hypothetical protein CBG08355 [Caeno...   149   6e-35
gi|17557828|ref|NP_505635.1| COLlagen structural gene (col-148) ...   137   2e-31
gi|39593302|emb|CAE64772.1| Hypothetical protein CBG09563 [Caeno...   129   9e-29
gi|7494765|pir||T29837 hypothetical protein B0222.6 - Caenorhabd...   121   2e-26
gi|7619741|emb|CAB88204.1| putative cuticular collagen [Globoder...   120   3e-26
gi|17505428|ref|NP_492035.1| COLlagen structural gene (col-61) [...   109   7e-23
gi|39582788|emb|CAE74251.1| Hypothetical protein CBG21938 [Caeno...   108   2e-22
gi|7619739|emb|CAB88203.1| putative cuticular collagen [Globoder...   107   4e-22
gi|1235974|emb|CAA65474.1| collagen [Globodera pallida]               103   4e-21
gi|2267002|gb|AAB63467.1| cuticule collagen [Meloidogyne incognita]   101   3e-20
gi|479557|pir||S34665 collagen, cuticular - root-knot nematode (...    89   2e-16
gi|39589826|emb|CAE67061.1| Hypothetical protein CBG12469 [Caeno...    77   5e-13
gi|17542298|ref|NP_501532.1| COLlagen structural gene (col-118) ...    77   7e-13
gi|39585657|emb|CAE59859.1| Hypothetical protein CBG03334 [Caeno...    55   2e-06
gi|17539720|ref|NP_502372.1| COLlagen structural gene (28.8 kD) ...    55   2e-06
gi|17563992|ref|NP_505484.1| COLlagen structural gene (27.4 kD) ...    46   0.001
gi|17542824|ref|NP_501756.1| COLlagen structural gene (col-123) ...    45   0.002
gi|17563988|ref|NP_505486.1| COLlagen structural gene (27.2 kD) ...    45   0.003
gi|17567005|ref|NP_510248.1| COLlagen structural gene (col-184) ...    45   0.003
gi|39593091|emb|CAE64560.1| Hypothetical protein CBG09310 [Caeno...    44   0.004
gi|39594380|emb|CAE71958.1| Hypothetical protein CBG19027 [Caeno...    43   0.008
gi|17564310|ref|NP_504735.1| COLlagen structural gene (col-141) ...    42   0.014
gi|39594639|emb|CAE72217.1| Hypothetical protein CBG19328 [Caeno...    42   0.024
gi|39594640|emb|CAE72218.1| Hypothetical protein CBG19329 [Caeno...    42   0.024
gi|39594379|emb|CAE71957.1| Hypothetical protein CBG19026 [Caeno...    41   0.031
gi|687634|gb|AAA62504.1| collagen                                      41   0.041
gi|17560252|ref|NP_504525.1| COLlagen structural gene (col-140) ...    40   0.054
gi|17508163|ref|NP_492936.1| COLlagen structural gene (col-65) [...    40   0.054
gi|687636|gb|AAA62505.1| collagen [Caenorhabditis elegans]             40   0.054
gi|39592028|emb|CAE75248.1| Hypothetical protein CBG23205 [Caeno...    40   0.070
gi|39585781|emb|CAE59983.1| Hypothetical protein CBG03475 [Caeno...    40   0.070
gi|17543526|ref|NP_502966.1| predicted CDS, COLlagen structural ...    35   0.080
gi|17541560|ref|NP_502297.1| COLlagen structural gene (33.5 kD) ...    40   0.091
gi|32563747|ref|NP_494878.2| COLlagen structural gene (col-17) [...    40   0.091
gi|39580427|emb|CAE69309.1| Hypothetical protein CBG15367 [Caeno...    39   0.16
gi|39593890|emb|CAE62183.1| Hypothetical protein CBG06230 [Caeno...    39   0.16
gi|17564308|ref|NP_504736.1| COLlagen structural gene (col-142) ...    39   0.20
gi|17564306|ref|NP_504738.1| COLlagen structural gene (col-143) ...    38   0.27
gi|39594381|emb|CAE71959.1| Hypothetical protein CBG19029 [Caeno...    38   0.27
gi|39595633|emb|CAE67135.1| Hypothetical protein CBG12558 [Caeno...    38   0.35
gi|1236783|emb|CAA65506.1| cuticular collagen [Teladorsagia circ...    37   0.45
gi|1236781|emb|CAA65507.1| cuticular collagen [Teladorsagia circ...    37   0.45
gi|39596526|emb|CAE63145.1| Hypothetical protein CBG07447 [Caeno...    37   0.59
gi|42780655|ref|NP_977902.1| hypothetical protein BCE1580 [Bacil...    37   0.59
gi|25145834|ref|NP_501273.2| COLlagen structural gene (col-14) [...    37   0.77
gi|17539048|ref|NP_500094.1| COLlagen structural gene (col-107) ...    37   0.77
gi|32566500|ref|NP_872105.1| COLlagen structural gene (27.6 kD) ...    37   0.77
gi|39596361|emb|CAE69999.1| Hypothetical protein CBG16406 [Caeno...    37   0.77
gi|7497485|pir||T29810 hypothetical protein C46A5.3 - Caenorhabd...    37   0.77
gi|39595004|emb|CAE70872.1| Hypothetical protein CBG17662 [Caeno...    37   0.77
gi|39587940|emb|CAE67959.1| Hypothetical protein CBG13563 [Caeno...    37   0.77
gi|17532621|ref|NP_494879.1| COLlagen structural gene (col-20) [...    36   1.0
gi|39586236|emb|CAE66647.1| Hypothetical protein CBG11984 [Caeno...    36   1.0
gi|17539040|ref|NP_501123.1| COLlagen structural gene (35.6 kD) ...    36   1.3
gi|17507553|ref|NP_490679.1| COLlagen structural gene (col-45) [...    35   1.7
gi|39593522|emb|CAE61814.1| Hypothetical protein CBG05782 [Caeno...    35   1.7
gi|39595279|emb|CAE60316.1| Hypothetical protein CBG03907 [Caeno...    35   1.7
gi|84431|pir||JS0169 collagen col-14 - Caenorhabditis elegans >g...    35   1.7
gi|7508686|pir||T15143 hypothetical protein T28F2.8 - Caenorhabd...    35   1.7
gi|21703896|ref|NP_663424.1| ISG12 [Mus musculus] >gnl|BL_ORD_ID...    35   2.3
gi|42627815|tpe|CAE00399.1| TPA: putative ISG12(b2) protein [Mus...    35   2.3
gi|39593739|emb|CAE62032.1| Hypothetical protein CBG06046 [Caeno...    35   2.3
gi|39593008|emb|CAE62622.1| Hypothetical protein CBG06744 [Caeno...    35   2.9
gi|17555486|ref|NP_497131.1| COLlagen structural gene (29.1 kD) ...    35   2.9
gi|17534799|ref|NP_493702.1| COLlagen structural gene (col-69) [...    35   2.9
gi|37527923|ref|NP_931268.1| Transposase, IS630 family [Photorha...    34   3.8
gi|17540706|ref|NP_499982.1| COLlagen structural gene (33.8 kD) ...    34   3.8
gi|37524327|ref|NP_927671.1| Transposase, IS630 family [Photorha...    34   3.8
gi|39596301|emb|CAE69939.1| Hypothetical protein CBG16321 [Caeno...    34   5.0
gi|17535069|ref|NP_496535.1| COLlagen structural gene (col-84) [...    34   5.0
gi|39597161|emb|CAE59388.1| Hypothetical protein CBG02745 [Caeno...    34   5.0
gi|7507620|pir||T16841 hypothetical protein T10E10.2 - Caenorhab...    27   5.3
gi|7378657|emb|CAB85466.1| putative cuticular collagen [Ascaris ...    33   6.5
gi|17508863|ref|NP_491786.1| predicted CDS, COLlagen structural ...    33   6.5
gi|17560484|ref|NP_505709.1| COLlagen structural gene (col-152) ...    33   6.5
gi|26247122|ref|NP_753162.1| Hypothetical protein [Escherichia c...    33   8.6
gi|115410|sp|P12114|CCS1_CAEEL Cuticle collagen sqt-1 >gnl|BL_OR...    33   8.6
gi|17535735|ref|NP_496421.1| SQuaT SQT-1, ROLler: helically twis...    33   8.6
gi|26251191|ref|NP_757231.1| Hypothetical protein [Escherichia c...    33   8.6
gi|39592067|emb|CAE75287.1| Hypothetical protein CBG23255 [Caeno...    33   8.6
gi|17559154|ref|NP_505981.1| COLlagen structural gene (33.2 kD) ...    33   8.6


>gi|17570601|ref|NP_509692.1| COLlagen structural gene (28.7 kD)
           (col-176) [Caenorhabditis elegans]
 gi|7510705|pir||T27525 hypothetical protein ZC373.7 -
           Caenorhabditis elegans
 gi|3881378|emb|CAA88979.1| Hypothetical protein ZC373.7
           [Caenorhabditis elegans]
          Length = 297

 Score =  247 bits (631), Expect = 2e-64
 Identities = 131/186 (70%), Positives = 131/186 (70%)
 Frame = +1

Query: 1   MFEEKLLVSVASAFSTLAIVACLVVVPSLYATIDEIHAEVLDGVNVFRVETDSAWTEMMD 180
           MFEEKLLVSVASAFSTLAIVACLVVVPSLYATIDEIHAEVLDGVNVFRVETDSAWTEMMD
Sbjct: 1   MFEEKLLVSVASAFSTLAIVACLVVVPSLYATIDEIHAEVLDGVNVFRVETDSAWTEMMD 60

Query: 181 IQILVTPPTKPRVNPFNSVFRQKRQTFSGLPAWCQCEXXXXXXXXXXXXXXXXXXXXXXX 360
           IQILVTPPTKPRVNPFNSVFRQKRQTFSGLPAWCQCE
Sbjct: 61  IQILVTPPTKPRVNPFNSVFRQKRQTFSGLPAWCQCEPTKPTCPPGPPGPPGPAGQPGTP 120

Query: 361 XXXXXXXXDSTTTFAPINCPTAPSDCIKCXXXXXXXXXXXXXXXXXXXXXXXXQPGSAGH 540
                   DSTTTFAPINCPTAPSDCIKC                        QPGSAGH
Sbjct: 121 GAPGPKGQDSTTTFAPINCPTAPSDCIKCAPGPAGPAGSAGPAGPKGPDGRPGQPGSAGH 180

Query: 541 PGAPGQ 558
           PGAPGQ
Sbjct: 181 PGAPGQ 186



 Score = 40.0 bits (92), Expect = 0.070
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 844 YCACPPRSAVFVARRH 891
           YCACPPRSAVFVARRH
Sbjct: 282 YCACPPRSAVFVARRH 297




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