Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= ZC376_5
         (876 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17566654|ref|NP_506512.1| putative nuclear protein, with 2 co...   209   6e-53
gi|17507413|ref|NP_491273.1| predicted CDS, putative nuclear pro...   172   9e-42
gi|17507411|ref|NP_491272.1| putative nuclear protein family mem...   172   9e-42
gi|17542214|ref|NP_502074.1| putative nuclear protein family mem...   168   1e-40
gi|39591524|emb|CAE71100.1| Hypothetical protein CBG17952 [Caeno...   163   5e-39
gi|39583634|emb|CAE65738.1| Hypothetical protein CBG10823 [Caeno...   162   9e-39
gi|39579752|emb|CAE56703.1| Hypothetical protein CBG24488 [Caeno...    49   2e-04
gi|17539276|ref|NP_501795.1| putative protein family member, wit...    49   2e-04
gi|39595138|emb|CAE60175.1| Hypothetical protein CBG03730 [Caeno...    48   3e-04
gi|39595140|emb|CAE60177.1| Hypothetical protein CBG03732 [Caeno...    48   3e-04
gi|17507303|ref|NP_492538.1| putative protein family member (1K1...    47   4e-04
gi|17505923|ref|NP_492537.1| putative protein family member (1K1...    47   6e-04
gi|17505476|ref|NP_492578.1| predicted CDS, putative protein fam...    45   0.002
gi|17508115|ref|NP_492545.1| putative protein family member (28....    45   0.002
gi|17562958|ref|NP_506634.1| putative protein family member (5P1...    44   0.005
gi|39595137|emb|CAE60174.1| Hypothetical protein CBG03729 [Caeno...    40   0.052
gi|39584447|emb|CAE72585.1| Hypothetical protein CBG19773 [Caeno...    40   0.068
gi|39584389|emb|CAE72527.1| Hypothetical protein CBG19707 [Caeno...    39   0.15
gi|39589688|emb|CAE66923.1| Hypothetical protein CBG12311 [Caeno...    39   0.20
gi|7499988|pir||T29525 hypothetical protein F27C1.3 - Caenorhabd...    39   0.20
gi|17506909|ref|NP_491592.1| putative protein family member (26....    39   0.20
gi|17509711|ref|NP_491211.1| predicted CDS, putative protein fam...    38   0.26
gi|47211783|emb|CAF93751.1| unnamed protein product [Tetraodon n...    36   0.98
gi|39598271|emb|CAE68963.1| Hypothetical protein CBG14943 [Caeno...    33   6.3


>gi|17566654|ref|NP_506512.1| putative nuclear protein, with 2
           coiled coil-4 domains (5O661) [Caenorhabditis elegans]
 gi|7510715|pir||T27534 hypothetical protein ZC376.8 -
           Caenorhabditis elegans
 gi|3881414|emb|CAB00885.1| Hypothetical protein ZC376.8
           [Caenorhabditis elegans]
          Length = 291

 Score =  209 bits (532), Expect = 6e-53
 Identities = 104/124 (83%), Positives = 104/124 (83%)
 Frame = +1

Query: 430 DTFKKPVDESAVAPKKDPNYQVISDGGQEVLGLVTLCGLNNDLFGPDKNPKKQFKAPTKV 609
           DTFKKPVDESAVAPKKDPNYQVISDGGQEVLGLVTLCGLNNDLFGPDKNPKKQFKAPTKV
Sbjct: 144 DTFKKPVDESAVAPKKDPNYQVISDGGQEVLGLVTLCGLNNDLFGPDKNPKKQFKAPTKV 203

Query: 610 EKADVKDPQYETLNGLXXXXXXXXXXXXXXXXXXXXQPDKVQKADAKDPQYETLNEVDKG 789
           EKADVKDPQYETLNGL                    QPDKVQKADAKDPQYETLNEVDKG
Sbjct: 204 EKADVKDPQYETLNGLGEEMFKDEKKDDEGKKKEFKQPDKVQKADAKDPQYETLNEVDKG 263

Query: 790 IFNN 801
           IFNN
Sbjct: 264 IFNN 267



 Score = 99.4 bits (246), Expect = 9e-20
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 1   MAFAFWQIVDWNHVAFHLWSLLGLVSIAMTVFVCGKPKKKKDVSG 135
           MAFAFWQIVDWNHVAFHLWSLLGLVSIAMTVFVCGKPKKKKDVSG
Sbjct: 1   MAFAFWQIVDWNHVAFHLWSLLGLVSIAMTVFVCGKPKKKKDVSG 45




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