Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= ZK1290_2
(1434 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17538109|ref|NP_495577.1| RiboNuclease H (2H817) [Caenorhabdi... 536 e-151
gi|32564468|ref|NP_871976.1| RiboNuclease H (2H817) [Caenorhabdi... 463 e-129
gi|38176087|gb|AAB93313.3| Hypothetical protein ZK1290.6 [Caenor... 463 e-129
gi|7510969|pir||T34502 hypothetical protein ZK1290.6 - Caenorhab... 377 e-103
gi|39596026|emb|CAE67529.1| Hypothetical protein CBG13051 [Caeno... 300 6e-80
gi|2935442|gb|AAC78563.1| ribonuclease H1 [Homo sapiens] >gnl|BL... 63 2e-08
gi|21359816|ref|NP_002927.2| ribonuclease H1; RNase H1 [Homo sap... 63 2e-08
gi|3043447|emb|CAA11835.1| RNase HII [Homo sapiens] 63 2e-08
gi|49456597|emb|CAG46619.1| RNASEH1 [Homo sapiens] 62 3e-08
gi|45384532|ref|NP_990329.1| hypothetical protein LOC395848 [Gal... 60 1e-07
gi|18044436|gb|AAH19411.1| Ribonuclease H1 [Mus musculus] 57 8e-07
gi|6755334|ref|NP_035405.1| ribonuclease H1 [Mus musculus] >gnl|... 57 8e-07
gi|26352958|dbj|BAC40109.1| unnamed protein product [Mus musculus] 57 8e-07
gi|34863249|ref|XP_216670.2| similar to Ribonuclease H1 [Rattus ... 57 1e-06
gi|45552509|ref|NP_995777.1| CG8729-PB [Drosophila melanogaster]... 55 3e-06
gi|7512023|pir||JC5787 ribonuclease H (EC 3.1.26.4) 1 - fruit fl... 55 3e-06
gi|17137476|ref|NP_477315.1| CG8729-PA [Drosophila melanogaster]... 55 3e-06
gi|6323890|ref|NP_013961.1| Ribonuclease H1, removes RNA primers... 51 8e-05
gi|4357|emb|CAA40448.1| ribonuclease H [Saccharomyces cerevisiae] 51 8e-05
gi|46249528|gb|AAH68735.1| MGC81203 protein [Xenopus laevis] 50 1e-04
gi|49080866|ref|XP_403904.1| hypothetical protein UM06289.1 [Ust... 50 1e-04
gi|49095728|ref|XP_409325.1| hypothetical protein AN5188.2 [Aspe... 50 1e-04
gi|47214632|emb|CAG01473.1| unnamed protein product [Tetraodon n... 49 2e-04
gi|19112918|ref|NP_596126.1| ribonuclease h1 [Schizosaccharomyce... 49 4e-04
gi|31223900|ref|XP_317369.1| ENSANGP00000011612 [Anopheles gambi... 47 9e-04
gi|11359302|pir||T43641 ribonuclease H1 - fission yeast (Schizos... 47 0.001
gi|48103399|ref|XP_395566.1| similar to ENSANGP00000011612 [Apis... 47 0.001
gi|50543288|ref|XP_499810.1| hypothetical protein [Yarrowia lipo... 47 0.001
gi|50290915|ref|XP_447890.1| unnamed protein product [Candida gl... 47 0.001
gi|17534557|ref|NP_494920.1| RiboNuclease H (2F287ANDrnh-1) [Cae... 46 0.002
gi|29570460|gb|AAO91712.1| Hypothetical protein F59A6.9 [Caenorh... 46 0.002
gi|50543600|ref|XP_499966.1| hypothetical protein [Yarrowia lipo... 46 0.003
gi|50540386|ref|NP_001002659.1| zgc:91971 [Danio rerio] >gnl|BL_... 45 0.003
gi|50543708|ref|XP_500020.1| hypothetical protein [Yarrowia lipo... 45 0.003
gi|39590890|emb|CAE65264.1| Hypothetical protein CBG10155 [Caeno... 45 0.004
gi|39593762|emb|CAE62055.1| Hypothetical protein CBG06073 [Caeno... 45 0.006
gi|50543514|ref|XP_499923.1| hypothetical protein [Yarrowia lipo... 44 0.010
gi|48854541|ref|ZP_00308703.1| COG0328: Ribonuclease HI [Cytopha... 44 0.012
gi|32410249|ref|XP_325605.1| hypothetical protein [Neurospora cr... 43 0.016
gi|50545063|ref|XP_500083.1| hypothetical protein [Yarrowia lipo... 42 0.036
gi|38100979|gb|EAA48021.1| hypothetical protein (T30528 reverse ... 41 0.081
gi|50304317|ref|XP_452108.1| unnamed protein product [Kluyveromy... 41 0.081
gi|50552764|ref|XP_503792.1| hypothetical protein [Yarrowia lipo... 40 0.11
gi|33594118|ref|NP_881762.1| ribonuclease HI [Bordetella pertuss... 40 0.14
gi|33598343|ref|NP_885986.1| ribonuclease HI [Bordetella paraper... 40 0.14
gi|23128536|ref|ZP_00110381.1| COG0328: Ribonuclease HI [Nostoc ... 40 0.18
gi|50543706|ref|XP_500019.1| hypothetical protein [Yarrowia lipo... 40 0.18
gi|31239235|ref|XP_320031.1| ENSANGP00000010505 [Anopheles gambi... 39 0.24
gi|85020|pir||B26330 hypothetical protein 2 - fruit fly (Drosoph... 39 0.24
gi|903726|gb|AAA70222.1| I factor 39 0.24
gi|38103867|gb|EAA50511.1| hypothetical protein MG04270.4 [Magna... 39 0.40
gi|28493206|ref|NP_787367.1| ribonuclease H [Tropheryma whipplei... 38 0.52
gi|38110565|gb|EAA56261.1| hypothetical protein MG06232.4 [Magna... 38 0.52
gi|46913494|emb|CAG20280.1| hypothetical ribonuclease HI [Photob... 38 0.52
gi|38111749|gb|EAA57275.1| hypothetical protein MG08244.4 [Magna... 38 0.52
gi|50261036|gb|EAL23686.1| hypothetical protein CNBA3330 [Crypto... 38 0.68
gi|38101176|gb|EAA48179.1| hypothetical protein MG10242.4 [Magna... 38 0.68
gi|42560875|ref|NP_975326.1| ribonuclease H-related protein [Myc... 38 0.68
gi|23099909|ref|NP_693375.1| hypothetical protein OB2454 [Oceano... 38 0.68
gi|38103184|gb|EAA49918.1| hypothetical protein MG10082.4 [Magna... 38 0.68
gi|38107212|gb|EAA53417.1| hypothetical protein MG07694.4 [Magna... 38 0.68
gi|38100163|gb|EAA47333.1| hypothetical protein MG02576.4 [Magna... 38 0.68
gi|38099645|gb|EAA46964.1| hypothetical protein MG10775.4 [Magna... 38 0.68
gi|38100836|gb|EAA47912.1| hypothetical protein MG09042.4 [Magna... 37 0.89
gi|7493956|pir||T30528 reverse transcriptase - rice blast fungus... 37 0.89
gi|38108850|gb|EAA54803.1| hypothetical protein MG05594.4 [Magna... 37 0.89
gi|38101413|gb|EAA48379.1| hypothetical protein MG00037.4 [Magna... 37 0.89
gi|38110545|gb|EAA56247.1| hypothetical protein MG01899.4 [Magna... 37 0.89
gi|38103161|gb|EAA49899.1| hypothetical protein (T30528 reverse ... 37 0.89
gi|46320601|ref|ZP_00220987.1| COG0328: Ribonuclease HI [Burkhol... 37 1.2
gi|38107832|gb|EAA53953.1| hypothetical protein (T30528 reverse ... 37 1.2
gi|50545157|ref|XP_500116.1| hypothetical protein [Yarrowia lipo... 37 1.2
gi|46130351|ref|ZP_00165181.2| COG0328: Ribonuclease HI [Synecho... 37 1.2
gi|38109233|gb|EAA55135.1| hypothetical protein MG06792.4 [Magna... 37 1.5
gi|42780791|ref|NP_978038.1| conserved domain protein [Bacillus ... 37 1.5
gi|47566076|ref|ZP_00237114.1| ribonuclease H [Bacillus cereus G... 37 1.5
gi|46440980|gb|EAL00281.1| hypothetical protein CaO19.5614 [Cand... 36 2.0
gi|32041887|ref|ZP_00139470.1| COG0328: Ribonuclease HI [Pseudom... 36 2.0
gi|15597012|ref|NP_250506.1| ribonuclease H [Pseudomonas aerugin... 36 2.0
gi|30019747|ref|NP_831378.1| Ribonuclease H [Bacillus cereus ATC... 36 2.0
gi|585901|sp|Q07762|RNH1_CRIFA Ribonuclease H (RNase H) >gnl|BL_... 36 2.0
gi|46441100|gb|EAL00400.1| hypothetical protein CaO19.13057 [Can... 36 2.6
gi|46316452|ref|ZP_00217031.1| COG0328: Ribonuclease HI [Burkhol... 36 2.6
gi|30261696|ref|NP_844073.1| conserved domain protein [Bacillus ... 36 2.6
gi|21399518|ref|NP_655503.1| rnaseH, RNase H [Bacillus anthracis... 36 2.6
gi|49184525|ref|YP_027777.1| conserved domain protein [Bacillus ... 36 2.6
gi|2736044|gb|AAB94039.1| reverse transcriptase [Dugesiella sp.] 35 3.4
gi|38103883|gb|EAA50525.1| hypothetical protein MG04284.4 [Magna... 35 3.4
gi|38099615|gb|EAA46938.1| hypothetical protein MG10749.4 [Magna... 35 3.4
gi|50545205|ref|XP_500140.1| hypothetical protein [Yarrowia lipo... 35 3.4
gi|45358400|ref|NP_987957.1| RNase HI related protein [Methanoco... 35 4.4
gi|38100001|gb|EAA47224.1| hypothetical protein MG11049.4 [Magna... 35 5.8
gi|17227638|ref|NP_484186.1| ribonuclease H [Nostoc sp. PCC 7120... 35 5.8
gi|49095512|ref|XP_409217.1| hypothetical protein AN5080.2 [Aspe... 35 5.8
gi|50552380|ref|XP_503600.1| hypothetical protein [Yarrowia lipo... 35 5.8
gi|49090674|ref|XP_406798.1| hypothetical protein AN2661.2 [Aspe... 35 5.8
gi|49480969|ref|YP_035814.1| possible ribonuclease H [Bacillus t... 35 5.8
gi|32812829|emb|CAD67562.1| polymerase [Simian foamy virus-orang... 34 7.6
gi|50546104|ref|XP_500579.1| hypothetical protein [Yarrowia lipo... 34 7.6
gi|38101843|gb|EAA48746.1| hypothetical protein MG00404.4 [Magna... 34 7.6
gi|38108373|gb|EAA54403.1| hypothetical protein MG02388.4 [Magna... 34 7.6
gi|15897395|ref|NP_342000.1| Conserved hypothetical protein [Sul... 34 9.9
gi|38111717|gb|EAA57252.1| hypothetical protein MG08221.4 [Magna... 34 9.9
gi|38106451|gb|EAA52754.1| hypothetical protein MG05882.4 [Magna... 34 9.9
gi|11323019|emb|CAC16871.1| pol [Drosophila melanogaster] 34 9.9
gi|38107081|gb|EAA53304.1| hypothetical protein MG07581.4 [Magna... 34 9.9
gi|38103340|gb|EAA50045.1| hypothetical protein MG03804.4 [Magna... 34 9.9
gi|38099431|gb|EAA46778.1| hypothetical protein MG10472.4 [Magna... 34 9.9
gi|38102725|gb|EAA49529.1| hypothetical protein MG08444.4 [Magna... 34 9.9
gi|38108728|gb|EAA54703.1| hypothetical protein MG05495.4 [Magna... 34 9.9
gi|38099226|gb|EAA46599.1| hypothetical protein MG08942.4 [Magna... 34 9.9
>gi|17538109|ref|NP_495577.1| RiboNuclease H (2H817) [Caenorhabditis
elegans]
Length = 477
Score = 536 bits (1380), Expect = e-151
Identities = 282/465 (60%), Positives = 282/465 (60%)
Frame = +1
Query: 1 MIRWFRNFGALFKKPRGAGLMKNEQTHNLQRVVQNDITCPEEQRXXXXXXXXXXXXXXXX 180
MIRWFRNFGALFKKPRGAGLMKNEQTHNLQRVVQNDITCPEEQR
Sbjct: 1 MIRWFRNFGALFKKPRGAGLMKNEQTHNLQRVVQNDITCPEEQRSTGGKGGGGGSHGGHG 60
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRXXXXXX 360
PR
Sbjct: 61 GSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLSSGSTNTSYSKSTPRTNSGYS 120
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASRRQLRSVSSKPQKKYVA 540
IASRRQLRSVSSKPQKKYVA
Sbjct: 121 TGKTTKTASSSRNYSNTSSTRSTTKPSKSSYSKRSTKSTKIASRRQLRSVSSKPQKKYVA 180
Query: 541 TDMPXXXXXXXXXXXXXXXXXXXXADVXXXXXXXXXXXXXXXXXXXXXXXXXXXIEKSTR 720
TDMP ADV IEKSTR
Sbjct: 181 TDMPSTVSTGRSRGRSVYRRNNVNADVSQRQSRSMSVSRGRSRNRSQNRERSPSIEKSTR 240
Query: 721 SQHVSRKDAFNSHDVLSPTNRSGSVHRSHSAHHERTFEERHKTPNGVWNEMFPKGTLVMY 900
SQHVSRKDAFNSHDVLSPTNRSGSVHRSHSAHHERTFEERHKTPNGVWNEMFPKGTLVMY
Sbjct: 241 SQHVSRKDAFNSHDVLSPTNRSGSVHRSHSAHHERTFEERHKTPNGVWNEMFPKGTLVMY 300
Query: 901 TDGSYLKRPPTSGIGIFVGPGHELNRSQRIRGPIQDNNYAEFIAVRTALQNALKNENYRD 1080
TDGSYLKRPPTSGIGIFVGPGHELNRSQRIRGPIQDNNYAEFIAVRTALQNALKNENYRD
Sbjct: 301 TDGSYLKRPPTSGIGIFVGPGHELNRSQRIRGPIQDNNYAEFIAVRTALQNALKNENYRD 360
Query: 1081 QKVVIRTDCLNVIEALQGTRPTAFVDVKSQVEFLSKQFPKGVHFQHVYAHAGDPGNEMAD 1260
QKVVIRTDCLNVIEALQGTRPTAFVDVKSQVEFLSKQFPKGVHFQHVYAHAGDPGNEMAD
Sbjct: 361 QKVVIRTDCLNVIEALQGTRPTAFVDVKSQVEFLSKQFPKGVHFQHVYAHAGDPGNEMAD 420
Query: 1261 LFAGQASSKSQNSFGGGQXXXXXXXXXXXXXXXXXXXXXXNDPSF 1395
LFAGQASSKSQNSFGGGQ NDPSF
Sbjct: 421 LFAGQASSKSQNSFGGGQRTRSASTARGRSRERNRLRSKSNDPSF 465