Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= ZK593_6
(315 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17544592|ref|NP_502034.1| u6 snRNA-associated Sm-like protein... 206 1e-52
gi|39593669|emb|CAE61961.1| Hypothetical protein CBG05961 [Caeno... 197 3e-50
gi|49522817|gb|AAH74231.1| Unknown (protein for MGC:83430) [Xeno... 130 7e-30
gi|13384714|ref|NP_079625.1| LSM7 homolog, U6 small nuclear RNA ... 129 1e-29
gi|50760908|ref|XP_418176.1| PREDICTED: similar to U6 snRNA-asso... 129 2e-29
gi|34862278|ref|XP_343158.1| similar to RIKEN cDNA 0910001B06 [R... 129 2e-29
gi|47225688|emb|CAG08031.1| unnamed protein product [Tetraodon n... 129 2e-29
gi|7706423|ref|NP_057283.1| U6 snRNA-associated Sm-like protein ... 128 3e-29
gi|48123817|ref|XP_396541.1| similar to U6 snRNA-associated Sm-l... 125 3e-28
gi|49085588|ref|XP_404904.1| hypothetical protein AN0767.2 [Aspe... 124 4e-28
gi|20129565|ref|NP_609807.1| CG13277-PA [Drosophila melanogaster... 123 1e-27
gi|34851953|ref|XP_226519.2| similar to RIKEN cDNA 0910001B06 [R... 117 4e-26
gi|15227722|ref|NP_178480.1| small nuclear ribonucleoprotein, pu... 117 8e-26
gi|49071362|ref|XP_399970.1| hypothetical protein UM02355.1 [Ust... 113 1e-24
gi|38636805|dbj|BAD03046.1| putative snRNP splicing factor -rela... 109 2e-23
gi|46130650|ref|XP_389105.1| hypothetical protein FG08929.1 [Gib... 107 6e-23
gi|23508789|ref|NP_701457.1| u6 snRNA-associated Sm-like protein... 104 4e-22
gi|38100589|gb|EAA47695.1| hypothetical protein MG02938.4 [Magna... 103 9e-22
gi|19075840|ref|NP_588340.1| putative snRNP splicing factor; wit... 103 9e-22
gi|32417284|ref|XP_329120.1| hypothetical protein [Neurospora cr... 101 3e-21
gi|31223676|ref|XP_317337.1| ENSANGP00000010565 [Anopheles gambi... 99 2e-20
gi|32401287|gb|AAP80816.1| U6 snRNA-associated Sm-like protein L... 97 8e-20
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Crypto... 91 4e-18
gi|45198571|ref|NP_985600.1| AFR053Cp [Eremothecium gossypii] >g... 91 8e-18
gi|50309941|ref|XP_454984.1| unnamed protein product [Kluyveromy... 87 6e-17
gi|3289993|gb|AAC25622.1| R30783_1 [Homo sapiens] 87 1e-16
gi|6324182|ref|NP_014252.1| Like Sm-G protein; Lsm7p [Saccharomy... 81 6e-15
gi|50291047|ref|XP_447956.1| unnamed protein product [Candida gl... 80 1e-14
gi|44890026|emb|CAF32144.1| u6 snrna-associated sm-like protein,... 75 4e-13
gi|23478213|gb|EAA15360.1| u6 snRNA-associated sm-like protein l... 74 6e-13
gi|50422331|ref|XP_459728.1| unnamed protein product [Debaryomyc... 67 9e-11
gi|49069702|ref|XP_399140.1| hypothetical protein UM01525.1 [Ust... 64 8e-10
gi|39595458|emb|CAE60496.1| Hypothetical protein CBG04114 [Caeno... 62 3e-09
gi|17510511|ref|NP_491032.1| small nuclear ribonucleoprotein pol... 60 1e-08
gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein poly... 57 9e-08
gi|18860007|ref|NP_573139.1| CG9742-PA [Drosophila melanogaster]... 56 2e-07
gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleopro... 56 2e-07
gi|41053373|ref|NP_956305.1| LSM7 homolog, U6 small nuclear RNA ... 55 4e-07
gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G, ... 55 5e-07
gi|50421915|ref|XP_459516.1| unnamed protein product [Debaryomyc... 54 6e-07
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Crypto... 54 6e-07
gi|7451052|pir||S22826 small nuclear ribonucleoprotein E homolog... 54 6e-07
gi|50422333|ref|XP_459729.1| unnamed protein product [Debaryomyc... 54 6e-07
gi|46229816|gb|EAK90634.1| hypothetical protein cgd7_3520 [Crypt... 54 6e-07
gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein G, ... 54 8e-07
gi|31206519|ref|XP_312222.1| ENSANGP00000010868 [Anopheles gambi... 54 8e-07
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon n... 54 1e-06
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprot... 52 2e-06
gi|134126|sp|P24715|RUXG_MEDSA Probable small nuclear ribonucleo... 52 3e-06
gi|32420717|ref|XP_330802.1| hypothetical protein [Neurospora cr... 51 7e-06
gi|14318502|ref|NP_116636.1| snRNP G protein (the homologue of t... 51 7e-06
gi|45331351|gb|AAS57929.1| Lsm7p [Trypanosoma brucei] 50 9e-06
gi|19113214|ref|NP_596422.1| small nuclear ribonucleoprotein [Sc... 50 1e-05
gi|11498481|ref|NP_069709.1| snRNP, putative [Archaeoglobus fulg... 50 1e-05
gi|46107748|ref|XP_380933.1| conserved hypothetical protein [Gib... 49 3e-05
gi|23612793|ref|NP_704332.1| small nuclear ribonucleoprotein, pu... 49 3e-05
gi|38099604|gb|EAA46929.1| hypothetical protein MG10740.4 [Magna... 48 6e-05
gi|15678676|ref|NP_275791.1| conserved protein [Methanothermobac... 48 6e-05
gi|23484203|gb|EAA19613.1| putative small nuclear ribonucleoprot... 48 6e-05
gi|13786869|pdb|1I81|A Chain A, Crystal Structure Of A Heptameri... 48 6e-05
gi|18312096|ref|NP_558763.1| small nuclear ribonucleoprotein hom... 47 1e-04
gi|21536707|gb|AAM61039.1| putative snRNP protein [Arabidopsis t... 47 1e-04
gi|49087384|ref|XP_405632.1| hypothetical protein AN1495.2 [Aspe... 47 1e-04
gi|34900024|ref|NP_911358.1| putative snRNP protein [Oryza sativ... 47 1e-04
gi|14192871|gb|AAK55776.1| Putative small nuclear ribonucleoprot... 47 1e-04
gi|50546088|ref|XP_500571.1| hypothetical protein [Yarrowia lipo... 46 2e-04
gi|41720360|ref|ZP_00149173.1| COG1958: Small nuclear ribonucleo... 46 2e-04
gi|20093660|ref|NP_613507.1| Small nuclear ribonucleoprotein (sn... 46 2e-04
gi|15897658|ref|NP_342263.1| Small nuclear riboprotein protein (... 46 2e-04
gi|27732753|ref|XP_232769.1| similar to small nuclear ribonucleo... 46 2e-04
gi|15223768|ref|NP_177812.1| small nuclear ribonucleoprotein, pu... 46 2e-04
gi|14600779|ref|NP_147300.1| small nuclear ribonucleoprotein [Ae... 45 3e-04
gi|15241519|ref|NP_199263.1| small nuclear ribonucleoprotein ass... 45 3e-04
gi|28828130|gb|AAO50813.1| similar to Arabidopsis thaliana (Mous... 45 3e-04
gi|29726409|pdb|1LOJ|A Chain A, Crystal Structure Of A Methanoba... 45 4e-04
gi|19115063|ref|NP_594151.1| small nuclear ribonucleoprotein ass... 45 4e-04
gi|20150503|pdb|1JRI|A Chain A, The Crystal Structure Of An Sm-L... 45 4e-04
gi|29726339|pdb|1JBM|A Chain A, Heptameric Crystal Structure Of ... 45 4e-04
gi|39587671|emb|CAE58609.1| Hypothetical protein CBG01776 [Caeno... 44 6e-04
gi|46229827|gb|EAK90645.1| U6 snRNA-associated Sm-like protein L... 44 6e-04
gi|15218164|ref|NP_173542.1| small nuclear ribonucleoprotein, pu... 44 8e-04
gi|6320994|ref|NP_011073.1| Like Sm-E protein; Lsm5p [Saccharomy... 44 8e-04
gi|17543872|ref|NP_502579.1| sm like protein, U6 snRNA-associate... 44 8e-04
gi|50306859|ref|XP_453405.1| unnamed protein product [Kluyveromy... 44 8e-04
gi|15237095|ref|NP_193777.1| small nuclear ribonucleoprotein ass... 44 8e-04
gi|48838724|ref|ZP_00295664.1| COG1958: Small nuclear ribonucleo... 44 0.001
gi|50545209|ref|XP_500142.1| hypothetical protein [Yarrowia lipo... 44 0.001
gi|17136806|ref|NP_476921.1| CG5352-PA [Drosophila melanogaster]... 44 0.001
gi|38048415|gb|AAR10110.1| similar to Drosophila melanogaster Sm... 44 0.001
gi|48475146|gb|AAT44215.1| unknown protein [Oryza sativa (japoni... 44 0.001
gi|50728156|ref|XP_416009.1| PREDICTED: similar to U6 snRNA-asso... 43 0.001
gi|24649486|ref|NP_732931.1| CG31184-PA [Drosophila melanogaster... 43 0.001
gi|25012398|gb|AAN71307.1| RE11655p [Drosophila melanogaster] 43 0.001
gi|49094304|ref|XP_408613.1| hypothetical protein AN4476.2 [Aspe... 43 0.001
gi|45199029|ref|NP_986058.1| AFR511Cp [Eremothecium gossypii] >g... 43 0.001
gi|7706425|ref|NP_057284.1| U6 snRNA-associated Sm-like protein ... 43 0.001
gi|17544148|ref|NP_500964.1| u6 snRNA-associated Sm-like protein... 43 0.001
gi|31213159|ref|XP_315523.1| ENSANGP00000007148 [Anopheles gambi... 43 0.001
gi|14277786|pdb|1I8F|A Chain A, The Crystal Structure Of A Hepta... 43 0.002
gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus ... 43 0.002
gi|20092011|ref|NP_618086.1| Sm protein [Methanosarcina acetivor... 43 0.002
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis] 43 0.002
gi|18394697|ref|NP_564072.1| small nuclear ribonucleoprotein, pu... 43 0.002
gi|42733657|gb|AAO50828.2| similar to Arabidopsis thaliana (Mous... 42 0.002
gi|15218779|ref|NP_176747.1| small nuclear ribonucleoprotein, pu... 42 0.002
gi|31242329|ref|XP_321595.1| ENSANGP00000011793 [Anopheles gambi... 42 0.002
gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana] 42 0.002
gi|16081975|ref|NP_394385.1| hypothetical protein [Thermoplasma ... 42 0.003
gi|47206420|emb|CAF94178.1| unnamed protein product [Tetraodon n... 42 0.003
gi|24655606|ref|NP_647660.1| CG2021-PA [Drosophila melanogaster]... 42 0.003
gi|23612724|ref|NP_704263.1| u6 snRNA-associated sm-like protein... 42 0.003
gi|48095264|ref|XP_394397.1| similar to CG31184-PA [Apis mellifera] 42 0.004
gi|1401208|gb|AAD05369.1| small nucleolar ribonucleoprotein E ho... 42 0.004
gi|7657315|ref|NP_055278.1| Lsm3 protein [Homo sapiens] >gnl|BL_... 42 0.004
gi|50754429|ref|XP_414380.1| PREDICTED: similar to U6 snRNA-asso... 42 0.004
gi|39584186|emb|CAE61561.1| Hypothetical protein CBG05470 [Caeno... 42 0.004
gi|50302335|ref|XP_451102.1| unnamed protein product [Kluyveromy... 41 0.005
gi|21226441|ref|NP_632363.1| putative snRNP Sm-like protein [Met... 41 0.005
gi|34858687|ref|XP_342517.1| similar to small nuclear ribonucleo... 41 0.005
gi|7208221|gb|AAF40115.1| small nuclear ribonucleoprotein B' [Ma... 41 0.007
gi|12643865|sp|Q9TU67|RSMB_ERIEU Small nuclear ribonucleoprotein... 41 0.007
gi|38150007|ref|NP_937859.1| small nuclear ribonucleoprotein pol... 41 0.007
gi|337461|gb|AAA36579.1| small nuclear ribonucleoprotein particl... 41 0.007
gi|15239727|ref|NP_199698.1| small nuclear ribonucleoprotein, pu... 41 0.007
gi|6730226|pdb|1D3B|B Chain B, Crystal Structure Of The D3b Subc... 41 0.007
gi|45708426|gb|AAH03530.1| SNRPB protein [Homo sapiens] 41 0.007
gi|5870129|gb|AAD54488.1| small nuclear ribonucleoprotein B [Hom... 41 0.007
gi|50303233|ref|XP_451558.1| unnamed protein product [Kluyveromy... 41 0.007
gi|337459|gb|AAA36578.1| small nuclear ribonucleoprotein particl... 41 0.007
gi|38080450|ref|XP_357495.1| similar to small nuclear ribonucleo... 41 0.007
gi|18312179|ref|NP_558846.1| small nuclear ribonucleoprotein hom... 41 0.007
gi|190247|gb|AAA60151.1| snRNP polypeptide B 41 0.007
gi|6678053|ref|NP_033251.1| small nuclear ribonucleoprotein B [M... 41 0.007
gi|5870130|gb|AAD54489.1| small nuclear ribonucleoprotein B' [Ho... 41 0.007
gi|4507125|ref|NP_003082.1| small nuclear ribonucleoprotein poly... 41 0.007
gi|45382973|ref|NP_989930.1| small nuclear ribonucleoprotein B [... 40 0.009
gi|10720265|sp|Q9TU66|RSMB_MONDO Small nuclear ribonucleoprotein... 40 0.009
gi|50550683|ref|XP_502814.1| hypothetical protein [Yarrowia lipo... 40 0.009
gi|25404943|pir||G96681 protein F1E22.8 [imported] - Arabidopsis... 40 0.009
gi|18400270|ref|NP_566476.1| small nuclear ribonucleoprotein, pu... 40 0.009
gi|3142634|gb|AAC78612.1| small nuclear ribonucleoprotein N [Mus... 40 0.012
gi|14324575|dbj|BAB59502.1| small nuclear ribonucleoprotein [The... 40 0.012
gi|47575712|ref|NP_001001198.1| hypothetical protein MGC76201 [X... 40 0.012
gi|50540540|ref|NP_991230.1| snRNP-associated protein [Danio rer... 40 0.012
gi|34869034|ref|XP_345547.1| similar to Small nuclear ribonucleo... 40 0.012
gi|48103537|ref|XP_392871.1| similar to ENSANGP00000007148 [Apis... 40 0.012
gi|13541187|ref|NP_110875.1| Small nuclear ribonucleoprotein (sn... 40 0.012
gi|112305|pir||A35448 small nuclear ribonucleoprotein-associated... 40 0.015
gi|4507135|ref|NP_003088.1| small nuclear ribonucleoprotein poly... 40 0.015
gi|21358059|ref|NP_648022.1| CG6610-PA [Drosophila melanogaster]... 40 0.015
gi|17509627|ref|NP_493348.1| small nuclear ribonucleoprotein, sm... 40 0.015
gi|47211209|emb|CAF90166.1| unnamed protein product [Tetraodon n... 40 0.015
gi|27371057|gb|AAH41275.1| Snrpn-prov protein [Xenopus laevis] 40 0.015
gi|50293209|ref|XP_449016.1| unnamed protein product [Candida gl... 39 0.020
gi|39582947|emb|CAE73012.1| Hypothetical protein CBG20368 [Caeno... 39 0.020
gi|32422527|ref|XP_331707.1| hypothetical protein [Neurospora cr... 39 0.020
gi|14520857|ref|NP_126332.1| snRNP, putative [Pyrococcus abyssi ... 39 0.020
gi|28948591|pdb|1M8V|A Chain A, Structure Of Pyrococcus Abyssii ... 39 0.020
gi|31240533|ref|XP_320680.1| ENSANGP00000020162 [Anopheles gambi... 39 0.020
gi|33944811|ref|XP_340553.1| small nuclear ribonucleoprotein pro... 39 0.020
gi|46108400|ref|XP_381258.1| hypothetical protein FG01082.1 [Gib... 39 0.020
gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon n... 39 0.020
gi|28279736|gb|AAH45532.1| LSM8 protein [Homo sapiens] 39 0.026
gi|14591301|ref|NP_143379.1| small nucleoprotein [Pyrococcus hor... 39 0.026
gi|6322337|ref|NP_012411.1| Like Sm protein; the finding that Ls... 39 0.026
gi|50290221|ref|XP_447542.1| unnamed protein product [Candida gl... 39 0.026
gi|16082245|ref|NP_394696.1| small nuclear ribonucleoprotein rel... 39 0.026
gi|46138721|ref|XP_391051.1| hypothetical protein FG10875.1 [Gib... 39 0.026
gi|38107284|gb|EAA53477.1| hypothetical protein MG07754.4 [Magna... 39 0.034
gi|50285713|ref|XP_445285.1| unnamed protein product [Candida gl... 39 0.034
gi|50413278|ref|XP_457238.1| unnamed protein product [Debaryomyc... 39 0.034
gi|27687269|ref|XP_212806.1| similar to small nuclear ribonucleo... 38 0.045
gi|13541906|ref|NP_111594.1| Small nuclear ribonucleoprotein (sn... 38 0.045
gi|31248054|ref|XP_316632.1| ENSANGP00000011511 [Anopheles gambi... 38 0.045
gi|46438093|gb|EAK97429.1| hypothetical protein CaO19.7290 [Cand... 38 0.059
gi|48852496|ref|ZP_00306682.1| COG1958: Small nuclear ribonucleo... 38 0.059
gi|45331353|gb|AAS57930.1| Lsm8p [Trypanosoma brucei] 38 0.059
gi|134545|sp|P17136|RSMB_RAT Small nuclear ribonucleoprotein ass... 38 0.059
gi|45198309|ref|NP_985338.1| AFL212Cp [Eremothecium gossypii] >g... 38 0.059
gi|38074190|ref|XP_357162.1| similar to LSM5 homolog, U6 small n... 38 0.059
gi|50549605|ref|XP_502273.1| hypothetical protein [Yarrowia lipo... 37 0.077
gi|18977914|ref|NP_579271.1| small nuclear ribonucleoprotein, pu... 37 0.077
gi|38082325|ref|XP_356939.1| similar to LSM5 homolog, U6 small n... 37 0.077
gi|50256061|gb|EAL18788.1| hypothetical protein CNBI0490 [Crypto... 37 0.077
gi|27667342|ref|XP_224630.1| similar to RIKEN cDNA 2310034K10 [R... 37 0.077
gi|50256455|gb|EAL19180.1| hypothetical protein CNBH2790 [Crypto... 37 0.077
gi|6912488|ref|NP_036454.1| U6 snRNA-associated Sm-like protein ... 37 0.10
gi|50732968|ref|XP_418849.1| PREDICTED: similar to LSM5 homolog,... 37 0.10
gi|48852470|ref|ZP_00306656.1| COG1958: Small nuclear ribonucleo... 37 0.10
gi|38083018|ref|XP_359370.1| similar to LSM5 homolog, U6 small n... 37 0.10
gi|34908592|ref|NP_915643.1| P0505D12.24 [Oryza sativa (japonica... 37 0.10
gi|50295347|ref|XP_444899.1| unnamed protein product [Candida gl... 37 0.10
gi|39582859|emb|CAE71635.1| Hypothetical protein CBG18602 [Caeno... 36 0.17
gi|47225103|emb|CAF98730.1| unnamed protein product [Tetraodon n... 36 0.17
gi|19173671|ref|NP_597474.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLE... 36 0.17
gi|46436659|gb|EAK96018.1| hypothetical protein CaO19.7256 [Cand... 36 0.17
gi|17560310|ref|NP_506870.1| u6 snRNA-associated Sm-like protein... 36 0.22
gi|23619425|ref|NP_705387.1| small nuclear ribonucleoprotein, pu... 36 0.22
gi|19173631|ref|NP_597434.1| SMALL NUCLEAR RIBONUCLEOPROTEIN G [... 36 0.22
gi|19076009|ref|NP_588509.1| splicing factor [Schizosaccharomyce... 36 0.22
gi|23481340|gb|EAA17647.1| small nuclear ribonucleoprotein homol... 35 0.29
gi|6320867|ref|NP_010946.1| associated with U1, U2, U4, and U5 s... 35 0.29
gi|48097428|ref|XP_393781.1| similar to LSM5 homolog, U6 small n... 35 0.38
gi|49072588|ref|XP_400583.1| hypothetical protein UM02968.1 [Ust... 35 0.38
gi|38344547|emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa (japo... 35 0.38
gi|38108467|gb|EAA54477.1| hypothetical protein MG02462.4 [Magna... 35 0.38
gi|50260704|gb|EAL23354.1| hypothetical protein CNBA0080 [Crypto... 35 0.50
gi|36495|emb|CAA34288.1| SmB /B' autoimmune antigene [Homo sapiens] 35 0.50
gi|23509633|ref|NP_702300.1| small nuclear ribonuclear protein, ... 35 0.50
gi|50426351|ref|XP_461772.1| unnamed protein product [Debaryomyc... 35 0.50
gi|50308811|ref|XP_454410.1| unnamed protein product [Kluyveromy... 34 0.65
gi|32411457|ref|XP_326209.1| hypothetical protein [Neurospora cr... 34 0.65
gi|19112312|ref|NP_595520.1| hypothetical protein [Schizosacchar... 34 0.65
gi|24581280|ref|NP_722859.1| CG31950-PA [Drosophila melanogaster... 34 0.65
gi|17533843|ref|NP_496385.1| u6 snRNA-associated Sm-like protein... 34 0.65
gi|39597338|emb|CAE59566.1| Hypothetical protein CBG02963 [Caeno... 34 0.65
gi|19112516|ref|NP_595724.1| putative small nuclear ribonucleopr... 34 0.85
gi|41053075|dbj|BAD08019.1| putative small nuclear ribonucleopro... 33 1.1
gi|28572930|ref|NP_789710.1| putative serine/threonine-protein k... 33 1.1
gi|28493745|ref|NP_787906.1| probable serine/threonine protein k... 33 1.1
gi|38076462|ref|XP_147856.2| similar to Small nuclear ribonucleo... 33 1.1
gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis ... 33 1.1
gi|31205115|ref|XP_311506.1| ENSANGP00000022836 [Anopheles gambi... 33 1.1
gi|15224217|ref|NP_179464.1| small nuclear ribonucleoprotein E, ... 33 1.4
gi|46579435|ref|YP_010243.1| SUF system FeS assembly ATPase SufC... 33 1.4
gi|16944624|emb|CAD11394.1| probable U6 SNRNA-ASSOCIATED SM-LIKE... 33 1.4
gi|41147656|ref|XP_168583.4| similar to intestinal membrane muci... 33 1.4
gi|27677454|ref|XP_218827.1| similar to small nuclear ribonucleo... 33 1.4
gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E, ... 33 1.9
gi|45191033|ref|NP_985287.1| AER432Cp [Eremothecium gossypii] >g... 33 1.9
gi|25407624|pir||F85354 small nuclear ribonucleoprotein homolog ... 33 1.9
gi|13812032|ref|NP_113163.1| small nuclear ribonucleoprotein F [... 33 1.9
gi|6324733|ref|NP_014802.1| Required for pre-mRNA splicing, cap ... 33 1.9
gi|50417210|gb|AAH78334.1| Unknown (protein for MGC:101136) [Dan... 33 1.9
gi|312005|emb|CAA46626.1| small nuclear ribonucleoprotein E [Mus... 32 2.5
gi|31241953|ref|XP_321407.1| ENSANGP00000012242 [Anopheles gambi... 32 2.5
gi|46111729|ref|XP_382922.1| hypothetical protein FG02746.1 [Gib... 32 2.5
gi|24582631|ref|NP_609162.1| CG18591-PA [Drosophila melanogaster... 32 2.5
gi|29374686|ref|NP_813838.1| PTS system, IIBC components [Entero... 32 2.5
gi|338259|gb|AAB59365.1| small nuclear ribonucleic protein 32 2.5
gi|4507129|ref|NP_003085.1| small nuclear ribonucleoprotein poly... 32 2.5
gi|27721799|ref|XP_236711.1| similar to small nuclear ribonucleo... 32 2.5
gi|50120001|ref|YP_049168.1| putative integrase [Erwinia carotov... 32 3.2
gi|27378886|ref|NP_770415.1| bll3775 [Bradyrhizobium japonicum U... 32 3.2
gi|2736182|gb|AAB94082.1| coat protein [cowpea mild mottle virus] 32 3.2
gi|41581243|emb|CAE47892.1| u6 snrna-associated sm-like protein,... 32 3.2
gi|50806596|ref|XP_424457.1| PREDICTED: similar to ERGIC-53 prot... 32 3.2
gi|14765206|ref|XP_046099.1| similar to small nuclear ribonucleo... 32 3.2
gi|49256559|gb|AAH72956.1| Unknown (protein for MGC:82471) [Xeno... 32 3.2
gi|14741936|ref|XP_034623.1| similar to small nuclear ribonucleo... 32 3.2
gi|50603823|gb|AAH77697.1| Unknown (protein for MGC:89991) [Xeno... 32 3.2
gi|20987514|gb|AAH29872.1| Unknown (protein for IMAGE:5176422) [... 32 4.2
gi|15897150|ref|NP_341755.1| Small nuclear riboprotein protein (... 32 4.2
gi|28436814|gb|AAH47081.1| LOC201191 protein [Homo sapiens] 32 4.2
gi|24656769|ref|NP_611559.1| CG4279-PA [Drosophila melanogaster]... 32 4.2
gi|46226537|gb|EAK87525.1| small nuclear ribonucleoprotein U6 [C... 32 4.2
gi|7208223|gb|AAF40116.1| truncated small nuclear ribonucleoprot... 32 4.2
gi|39589637|emb|CAE66872.1| Hypothetical protein CBG12250 [Caeno... 32 4.2
gi|13160046|emb|CAC32828.1| dJ734P14.2.3 (small nuclear ribonucl... 32 4.2
gi|15790491|ref|NP_280315.1| snRNP homolog; Snp [Halobacterium s... 32 4.2
gi|2736184|gb|AAB94083.1| coat protein [cowpea mild mottle virus] 32 4.2
gi|46310630|gb|AAS87575.1| coat protein [Maize chlorotic mottle ... 32 4.2
gi|47227397|emb|CAF96946.1| unnamed protein product [Tetraodon n... 32 4.2
gi|41055945|ref|NP_957298.1| similar to small nuclear ribonucleo... 32 4.2
gi|27707378|ref|XP_228668.1| similar to small nuclear ribonucleo... 32 4.2
gi|46105464|ref|XP_380536.1| hypothetical protein FG00360.1 [Gib... 32 4.2
gi|49078276|ref|XP_402907.1| hypothetical protein UM05292.1 [Ust... 31 5.5
gi|5870115|gb|AAD54483.1| truncated small nuclear ribonucleoprot... 31 5.5
gi|19115292|ref|NP_594380.1| small nuclear ribonucleoprotein, F-... 31 5.5
gi|50425873|ref|XP_461533.1| unnamed protein product [Debaryomyc... 31 5.5
gi|23619460|ref|NP_705422.1| proteasome subunit, putative [Plasm... 31 5.5
gi|44889881|gb|AAS48468.1| attachment glycoprotein [Human metapn... 31 5.5
gi|44889919|gb|AAS48487.1| attachment glycoprotein [Human metapn... 31 5.5
gi|50417358|ref|XP_457687.1| unnamed protein product [Debaryomyc... 31 5.5
gi|47219887|emb|CAF97157.1| unnamed protein product [Tetraodon n... 31 7.2
gi|41690560|ref|ZP_00147092.1| COG0008: Glutamyl- and glutaminyl... 31 7.2
gi|34879178|ref|XP_344537.1| similar to U6 snRNA-associated Sm-l... 31 7.2
gi|20177947|sp|Q8VC85|LSM1_MOUSE U6 snRNA-associated Sm-like pro... 31 7.2
gi|7657313|ref|NP_055277.1| Lsm1 protein [Homo sapiens] >gnl|BL_... 31 7.2
gi|33243418|gb|AAQ01371.1| glycoprotein [Human metapneumovirus] 31 7.2
gi|49073276|ref|XP_400869.1| hypothetical protein UM03254.1 [Ust... 31 7.2
gi|28870256|ref|NP_792875.1| transcriptional regulator, LysR fam... 31 7.2
gi|8778287|gb|AAF79296.1| F14D16.28 [Arabidopsis thaliana] 30 9.4
gi|49903346|gb|AAH76684.1| Unknown (protein for MGC:79683) [Xeno... 30 9.4
gi|38048537|gb|AAR10171.1| similar to Drosophila melanogaster Pr... 30 9.4
gi|48731202|ref|ZP_00264948.1| COG3501: Uncharacterized protein ... 30 9.4
gi|46126751|ref|XP_387929.1| hypothetical protein FG07753.1 [Gib... 30 9.4
gi|45198700|ref|NP_985729.1| AFR182Cp [Eremothecium gossypii] >g... 30 9.4
gi|50422737|ref|XP_459945.1| unnamed protein product [Debaryomyc... 30 9.4
gi|32417590|ref|XP_329273.1| hypothetical protein [Neurospora cr... 30 9.4
gi|50309253|ref|XP_454633.1| unnamed protein product [Kluyveromy... 30 9.4
gi|45185777|ref|NP_983493.1| ACR091Wp [Eremothecium gossypii] >g... 30 9.4
gi|48782829|ref|ZP_00279309.1| COG0583: Transcriptional regulato... 30 9.4
>gi|17544592|ref|NP_502034.1| u6 snRNA-associated Sm-like protein
(lsm-6) [Caenorhabditis elegans]
gi|7511226|pir||T27926 hypothetical protein ZK593.7 -
Caenorhabditis elegans
gi|3881724|emb|CAA93428.1| Hypothetical protein ZK593.7
[Caenorhabditis elegans]
Length = 104
Score = 206 bits (524), Expect = 1e-52
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = +1
Query: 1 MSKDEGKRKKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQ 180
MSKDEGKRKKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQ
Sbjct: 1 MSKDEGKRKKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQ 60
Query: 181 NPSVVGDETRQLGLIVARGTAITVVSPADGLEQIANPFATQEEE 312
NPSVVGDETRQLGLIVARGTAITVVSPADGLEQIANPFATQEEE
Sbjct: 61 NPSVVGDETRQLGLIVARGTAITVVSPADGLEQIANPFATQEEE 104