hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/B0205.9
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Query:  B0205.9  CE17323    status:Partially_confirmed TR:O61745 protein_id:AAC16995.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
SPK            Domain of unknown function (DUF545)      391.1   1.1e-113   2
Flavi_glycop_C Flavivirus glycoprotein, immunoglobuli     3.5        3.4   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Flavi_glycop_C   1/1      43    51 ..     1    10 [.     3.5      3.4
SPK              1/2       5   115 ..     1   115 []   201.6  1.2e-56
SPK              2/2     117   227 ..     1   115 []   195.8  6.6e-55

Alignments of top-scoring domains:
Flavi_glycop_C: domain 1 of 1, from 43 to 51: score 3.5, E = 3.4
                   *->sYtMCtgskF<-*
                      +Y+MC + kF
     B0205.9    43    TYSMCYD-KF    51

SPK: domain 1 of 2, from 5 to 115: score 201.6, E = 1.2e-56
                   *->aeltrfmdFLvekTKdavevkkPlpvatkvfeeFselegsglsesty
                      a+lt+ mdFLv+kTK+a e   P  + +++f e+s+l+++++++s++
     B0205.9     5    ANLTKYMDFLVKKTKNAAE---PT-TFKEIFDEYSRLDPDRSTYSMC 47

                   ykRFhrkLAPnmaklnnYSiEeRvRlMFaLsgkVeddFLerietiGtVeL
                   y++Fh+ LAP+m++ln+YSi eRvR+M  ++gkV++dFL++ie+ GtV+L
     B0205.9    48 YDKFHHRLAPIMNELNTYSIRERVRVMLTMGGKVSKDFLTTIEKLGTVQL 97

                   DekkRIckYtSnDGklkL<-*
                   Dek+RI kY+S+DGk+k
     B0205.9    98 DEKRRILKYASKDGKFKI    115

SPK: domain 2 of 2, from 117 to 227: score 195.8, E = 6.6e-55
                   *->aeltrfmdFLvekTKdavevkkPlpvatkvfeeFselegsglsesty
                         ++fmdFL+++T+dav+   P+ ++t++ +eF++  ++++s++t+
     B0205.9   117    GARSEFMDFLIQQTRDAVR---PM-TSTSIAKEFCRIKDRQVSVDTF 159

                   ykRFhrkLAPnmaklnnYSiEeRvRlMFaLsgkVeddFLerietiGtVeL
                   +k+F+r+LAPnm++++ Y + +R+R+MF+L+g+V  dFL++ie++GtV+L
     B0205.9   160 NKKFRRNLAPNMSRWSSYLLGDRIRMMFVLKGTVRTDFLAEIEKSGTVQL 209

                   DekkRIckYtSnDGklkL<-*
                   D+++RI++Y+SnDG  +L
     B0205.9   210 DDQRRIVRYASNDGMIEL    227

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