hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/B0361.9
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Query:  B0361.9  CE00838    status:Partially_confirmed SW:Q10952 protein_id:AAK18868.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
PAN      PAN domain                                      68.6    2.3e-20   1
ATP-bind Conserved hypothetical ATP binding protein       3.3        6.3   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PAN        1/1      49   134 ..     1   103 []    68.6  2.3e-20
ATP-bind   1/1     169   184 ..   220   235 .]     3.3      6.3

Alignments of top-scoring domains:
PAN: domain 1 of 1, from 49 to 134: score 68.6, E = 2.3e-20
                   *->Csggrsfhfervpgrsl.gfdvsvvknvpsleeClalClneprsgle
                      C++g  +h +++p +++ g+ + ++ +v+  ++Cl++C++ pr
     B0361.9    49    CPQG--LHADAIPEYVYfGTMLATM-TVDEHDQCLQKCAEKPR---- 88

                   FvCrsftYnnk.....skeClLssessgslgsgstlpqrsprlkrpptSg
                     C+++++++    ++ + C+L +e + +           p+l rp
     B0361.9    89 --CKAVNFFHPfayqeKGFCELLTEGQLD----------NPSLMRP---- 122

                   sqkvdyyenksC<-*
                    +k++yye+++C
     B0361.9   123 FRKATYYEKIRC    134

ATP-bind: domain 1 of 1, from 169 to 184: score 3.3, E = 6.3
                   *->yskLneaicllledfg<-*
                      +skL+++++  +++f+
     B0361.9   169    MSKLMKKLSAKVKEFN    184

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