hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/B0361.5
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Query:  B0361.5  CE00834   Phosphatidylserine decarboxylase status:Partially_confirmed SW:Q10949 protein_id:AAK18866.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
PS_Dcarbxylase Phosphatidylserine decarboxylase         173.4    3.9e-48   1
Glypican       Glypican                                   1.7        6.5   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Glypican         1/1     204   227 ..   606   631 .]     1.7      6.5
PS_Dcarbxylase   1/1     112   330 ..     1   244 []   173.4  3.9e-48

Alignments of top-scoring domains:
Glypican: domain 1 of 1, from 204 to 227: score 1.7, E = 6.5
                   *->tagvppalllltsmlilvVqrlFslw<-*
                      ++ vp++ll+   +l+++V++l  ++
     B0361.5   204    CRHVPGLLLSVRPTLLSHVPHL--FC    227

PS_Dcarbxylase: domain 1 of 1, from 112 to 330: score 173.4, E = 3.9e-48
                   *->lneFfvRklkpearRpilkgedilisPaDGrilvvpiideekreifq
                      + +Ff Rklk+ + Rpi+  +  l+sPaDG++l +++++++k  i+
     B0361.5   112    FAAFFNRKLKEST-RPISASP--LVSPADGTVLHFGKVEDNK--IEY 153

                   vKGkiysieellgpdkelsldynnGgFCEPHDElsfVsifLSPfDyHrfH
                   vKG++y  +++lg d +l   +  +       +l+ V+i+L+P+DyH fH
     B0361.5   154 VKGHDYDVDKFLG-DVDLPQKDE-L-------DLYQVVIYLAPGDYHAFH 194

                   aPcdGkilklryvpGrlfsvnplflrknpnLFseNeRvivlikteqGgkv
                   +P+ ++    r+vpG l+sv+p  l+++p LF+ NeRv++ +++ +G ++
     B0361.5   195 SPARWVANQCRHVPGLLLSVRPTLLSHVPHLFCLNERVVLNGSWRHG-FF 243

                   lvvqvGAlnvgsIvqtfkegevvn..........prhrivqtwtynAsei
                   ++ +v+A+nvg Iv ++++   +n  ++++++    ++++ + +
     B0361.5   244 SMSAVAATNVGDIVVDAEPSLRTNivrrktqkimNTETEIHAPYV----- 288

                   nggvkLlkGqelGmFrFGGStvvllfl.PnafrfdvdlgknSsegveerv
                          +G++ G Fr+G St+vl+f+ P  ++f  + g        ++
     B0361.5   289 -------SGERVGEFRLG-STIVLVFQaPPTIKFAIKAG--------DPL 322

                   kaGetlga<-*
                   + G++l+a
     B0361.5   323 RYGQSLVA    330

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