hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/B0361.6
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Query:  B0361.6  CE00835    status:Partially_confirmed SW:Q10950 protein_id:AAK18867.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
DUF171   Uncharacterized ACR, COG2106                    71.4    2.3e-19   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF171     1/2      67   111 ..     1    45 [.    34.7  6.1e-09
DUF171     2/2     144   203 ..    66   129 ..    35.7  3.1e-09

Alignments of top-scoring domains:
DUF171: domain 1 of 2, from 67 to 111: score 34.7, E = 6.1e-09
                   *->kySicIPtslleecrdLkikTYKVyqIARaAslFnVeeIvIyeds<-
                        Si+ P   l +    ++ TY ++qIARaA l +V+eI+Iy+ s
     B0361.6    67    TISIAVPGQFLNNAQSAELRTYMAGQIARAATLYRVDEIIIYDES   111

                   *

     B0361.6     -   -

DUF171: domain 2 of 2, from 144 to 203: score 35.7, E = 3.1e-09
                   *->IatLLqYfeTPqYLRktvFkkpikpyLkyAgvLPPLstlPfhraktk
                      +a +L+Y+e PqYLRk  F  pi + Lk Ag+L PL    +h
     B0361.6   144    LAKILEYLECPQYLRKDLF--PIQKPLKNAGLLNPLD-AQHHLKY-D 186

                   pkeGeyREGLtikrqkk<-*
                    k+ + REG++ k  +k
     B0361.6   187 EKTLRFREGVVLKKRSK    203

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