hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C01G10.10
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Query:  C01G10.10  CE20480   O-sialoglycoprotein endopeptidase status:Partially_confirmed TR:Q93170 protein_id:CAB02716.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Peptidase_M22   Glycoprotease family                    410.4   3.2e-132   1
ROK             ROK family                                6.2       0.89   1
DUF205          Domain of unknown function DUF            5.4        1.9   1
Xlink           Extracellular link domain                 4.6       0.21   1
ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal do     4.2        2.9   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
ROK               1/1      27    52 ..     1    26 [.     6.2     0.89
DUF205            1/1      73    83 ..   223   233 .]     5.4      1.9
ketoacyl-synt_C   1/1      79    98 ..    29    49 ..     4.2      2.9
Xlink             1/1     220   234 ..    54    68 ..     4.6     0.21
Peptidase_M22     1/1      24   315 ..     1   294 []   410.4 3.2e-132

Alignments of top-scoring domains:
ROK: domain 1 of 1, from 27 to 52: score 6.2, E = 0.89
                   *->giDlGgTkielalvdedgeildrerv<-*
                      gi+   +++++a+v+e++eil++er+
   C01G10.10    27    GIETSCDDTAVAIVNEKREILSSERY    52

DUF205: domain 1 of 1, from 73 to 83: score 5.4, E = 1.9
                   *->HReNIkRLlnG<-*
                      HReN+ RL+++
   C01G10.10    73    HRENLPRLIEK    83

ketoacyl-synt_C: domain 1 of 1, from 79 to 98: score 4.2, E = 2.9
                   *->rvrirrALadAgldPedVdYV<-*
                      r+ i+++L dAg +P d d V
   C01G10.10    79    RL-IEKCLNDAGTSPKDLDAV    98

Xlink: domain 1 of 1, from 220 to 234: score 4.6, E = 0.21
                   *->ADgsVRYPIvkPRen<-*
                      ADg++RYPI  P+ +
   C01G10.10   220    ADGHLRYPIFLPNVP    234

Peptidase_M22: domain 1 of 1, from 24 to 315: score 410.4, E = 3.2e-132
                   *->kvLAIETScddtgvAivrlvdegrvlasnvvysqiklhpqyGGVvPe
                      kvL+IETScddt+vAi   v+e+r+++s+++y+++++++q+GG++P
   C01G10.10    24    KVLGIETSCDDTAVAI---VNEKREILSSERYTERAIQRQQGGINPS 67

                   vaarhHserllplieraLaeagltElkdldaIAvtqGPGlftgLRvGvta
                   v+a +H+e+l++lie++L++ag++ +kdlda+Avt+ PGl+ +L +G+ a
   C01G10.10    68 VCALQHRENLPRLIEKCLNDAGTS-PKDLDAVAVTVTPGLVIALKEGISA 116

                   AktLAlaLdiPLvGVsHLeahalsarletgandpqfPfvallvsGGhtev
                   A ++A ++ +PL++V+H++ahals +l++  + ++fPf+a+l sGGh ++
   C01G10.10   117 AIGFAKKHRLPLIPVHHMRAHALSILLVD--DSVRFPFSAVLLSGGHALI 164

                   ywarylgdyrrllgetlddaaGealDkvArllg.....Ld..yPGGPaie
                    +a++++++++ +g++++++ Ge++DkvAr+lg+ ++++d+ ++G+ a+e
   C01G10.10   165 SVAEDVEKFKL-YGQSVSGSPGECIDKVARQLGdlgseFDgiHVGA-AVE 212

                   klaekgladedksikfPrpvkgspkldFSFSGLKTavlnliekllgqala
                    la +++ad  +++++P++++++pk++++F+++K+++lnl+e+l++++++
   C01G10.10   213 ILASRASAD--GHLRYPIFLPNVPKANMNFDQIKGSYLNLLERLRKNSET 260

                   eaekediAasfqetvidhlteklkraaelare.akgkkqllvaGGvaaNl
                    ++++d++as+q+tv++h+  kl+ ++e+++e++k +kql+++GGvaaN+
   C01G10.10   261 SIDIPDFCASLQNTVARHISSKLHIFFESLSEqEKLPKQLVIGGGVAANQ 310

                   yLRea<-*
                   y++ a
   C01G10.10   311 YIFGA    315

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