Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm1/seq/C01G12.8
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Query: C01G12.8 CE15577 sodium\/potasssium transporting ATPase status:Partially_confirmed TR:O45240 protein_id:CAB07586.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
E1-E2_ATPase E1-E2 ATPase 321.2 1.3e-96 1
Cation_ATPase_C Cation transporting ATPase, C-terminu 202.5 2.5e-60 1
Cation_ATPase_N Cation transporter/ATPase, N-terminus 105.7 9.6e-29 1
Hydrolase haloacid dehalogenase-like hydrolase 68.6 2.8e-17 3
YceI YceI like family 3.3 8.3 1
ANATO Anaphylotoxin-like domain 1.3 6.5 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Cation_ATPase_N 1/1 49 132 .. 1 87 [] 105.7 9.6e-29
YceI 1/1 353 369 .. 163 179 .] 3.3 8.3
E1-E2_ATPase 1/1 153 384 .. 1 245 [] 321.2 1.3e-96
Hydrolase 1/3 388 407 .. 1 21 [. 6.6 1.6
Hydrolase 2/3 602 669 .. 64 136 .. 26.9 5.2e-06
Hydrolase 3/3 714 764 .. 130 184 .] 34.9 3.5e-08
ANATO 1/1 937 944 .. 30 37 .] 1.3 6.5
Cation_ATPase_C 1/1 860 1038 .. 1 196 [] 202.5 2.5e-60
Alignments of top-scoring domains:
Cation_ATPase_N: domain 1 of 1, from 49 to 132: score 105.7, E = 9.6e-29
*->eelkkevdldahkltvEevlerLktdpeeGLsseeaaeRlkkyGpNe
e+lkk+v +d+h+++++ +++r+ t++++G s++ea++Rl ++GpN+
C01G12.8 49 EDLKKDVVIDDHEIPLDALFKRYTTSEKNGISEAEATNRLNRDGPNA 95
LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlyg<-*
L+p+k+ts w+k+ + ++++++lL++AA S +v yg
C01G12.8 96 LTPPKQTSKWIKLAGSIFGGFNFLLWCAASAS---AVGYG 132
YceI: domain 1 of 1, from 353 to 369: score 3.3, E = 8.3
*->mvgdeVkveidleavkq<-*
++ ++V+v+++l+avk+
C01G12.8 353 GIVPTVTVSLTLTAVKM 369
E1-E2_ATPase: domain 1 of 1, from 153 to 384: score 321.2, E = 1.3e-96
*->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei
+++++v++++++ fyq +++++ +++++++ pp++ V+RdG + ei
C01G12.8 153 ILATVVTVTGLFDFYQNRKSGNLMDSFANMIPPKTLVVRDG-ATREI 198
paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs
++++Lv+GD+V+++ GdrVPAD+rv+ +++ LkVD+S+LTGES+P+++
C01G12.8 199 EVKDLVVGDLVRFRGGDRVPADLRVTLARG-LKVDNSSLTGESEPQTR-N 246
dvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeAq
+++t n+le++n+++++T v++Gs++g++++tGd+Tf+g+Ia+L+ +++
C01G12.8 247 MNCTSKNALETKNLCMFSTSVLEGSGEGIIIGTGDRTFVGRIAALTTQVD 296
ssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegll
++tPl +++++f ki++ v++++++++fi++l+ + +++l
C01G12.8 297 PGPTPLAKEINHFIKIISIVAFTVGIAFFILALV------YEYPPLK--- 337
yalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt<-
a+ f ++++Va++Peg++ +vtv+l+l++ +m kk +LVK+l AvEt
C01G12.8 338 -AIVFFMGIVVANVPEGIVPTVTVSLTLTAVKMRKKFCLVKKLQAVET 384
*
C01G12.8 - -
Hydrolase: domain 1 of 3, from 388 to 407: score 6.6, E = 1.6
*->ikavvFDkDGTLtdgkeppia<-*
+ +++ Dk+GTLt+ + ++
C01G12.8 388 TSTICSDKTGTLTQN-RMTVT 407
Hydrolase: domain 2 of 3, from 602 to 669: score 26.9, E = 5.2e-06
*->d.evlglial.dklypgarealkaLkerGikvailTngdr.naeall
+ ++lgli d+++pg++ea++ ++ +Gi+v+++T++++ +a+a
C01G12.8 602 NlRFLGLISMiDPPRPGVPEAVRVCQNAGIRVVMVTGDHPiTARA-- 646
ealgla.lfdaiidsddvggvgpivvgKPk<-*
+a+ + +i+ +v+ +iv++ Pk
C01G12.8 647 ----IAnQVHIIEENVQVT---EIVNADPK 669
Hydrolase: domain 3 of 3, from 714 to 764: score 34.9, E = 3.5e-08
*->ivvgKPkpeifllalerlgvkpeevgpevlmvGDginDapalaaAGv
iv+++ +p +l+++e+++ + v + GDg+nDapal++A++
C01G12.8 714 IVFARTSPAQKLQIVEAFQSVGNIV----GVTGDGVNDAPALRKADI 756
gvamgngg<-*
g+amg +g
C01G12.8 757 GIAMGITG 764
ANATO: domain 1 of 1, from 937 to 944: score 1.3, E = 6.5
*->rkaFlqCC<-*
rka ++CC
C01G12.8 937 RKALESCC 944
Cation_ATPase_C: domain 1 of 1, from 860 to 1038: score 202.5, E = 2.5e-60
*->RpPRnpkkDeliftgllffrylviGvivavatlaaFvwwfygggenG
R PRnp +D+l++++l++f+y++iG+i+a+a+ F+++f+ + nG
C01G12.8 860 RAPRNPLYDKLVNKRLVMFSYMQIGAIQACAG---FTTYFVLMMSNG 903
edfgPhllygqlshwescgan..tdsfkgqewCeifrkglearaqTmaFt
++P++l++++++w++++ ++ +ds+ gq+w+++ rk le+ ++ ++F+
C01G12.8 904 --WFPQDLLNISEQWDNKYIDdlEDSY-GQQWSYESRKALESCCYGTFFF 950
vlVviqmfNAWEalncrsefFmhpldrnSlfqmgpgLfrNkwLllAvvls
++Vv q+ + +++++++ nSl+ +g ++N++L+ +v+++
C01G12.8 951 TIVVTQWSD---LFASKTR-------KNSLVMQG---MENHVLNTSVIFT 987
lalqllivYvPglqtiFgthpllslqeW.vvigfsflvfildElrKfikR
+ l+++++ +P+++ ++g ++ ++l+ ++++f+f + ++dE+r++++R
C01G12.8 988 CFLAIFVLNTPFVNEVLG-VQGFRLEIGfLALPFAFFIGLYDEVRRYFIR 1036
rr<-*
+
C01G12.8 1037 TY 1038