Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm1/seq/C16C2.3
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Query: C16C2.3 CE17405 inositol-1,4,5-triphosphate 5-phosphatase status:Partially_confirmed TR:O17590 protein_id:CAB02743.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Exo_endo_phos Endonuclease/Exonuclease/phosphatase fa 149.4 6.1e-41 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Exo_endo_phos 1/1 97 410 .. 1 189 [] 149.4 6.1e-41
Alignments of top-scoring domains:
Exo_endo_phos: domain 1 of 1, from 97 to 410: score 149.4, E = 6.1e-41
*->lkvltwNvnglra.l.l....llellr.edpDvlgLQEvkls.e.ll
++v t+Nvng ++ + +++ ++ + ++ +gLQE++ls ++ +
C16C2.3 97 ICVSTFNVNGRSPlSvFptwfSQKPEDiAEFYAVGLQEMDLSvGtYI 143
l.l.ll.gyy........................................
+++++ +++ + + + +++++ + ++ + + +++ +
C16C2.3 144 IdNtKKmEGWvdaihcslpggrtqfnvvgsmrlvgifvivfqavnskvrv 193
.............gfgg.gggkgGvailsklpllsvilgidlirvistsg
++ + ++ ++ ++ +++ g+kgG+a+ +k++ +
C16C2.3 194 sdvnvkyvatgisVLVNkLGNKGGTAVSMKMN-----------------D 226
t.fvvvntHlpag....deRlaqlaelldflsf.................
t +++vn+H++ag+++ ++R+++++++++++ f +++++++ ++++ + +
C16C2.3 227 TwVCFVNAHFAAGnnelERRNQDFRDIYNDMVFyprsqqeglrdrplevp 276
.....ksdpvillGDfNarpdewds.lle.igk.................
++d v+++GD+N+r++ + ++ ++ ++ ++++ + ++ +
C16C2.3 277 imclyDHDVVFWFGDLNYRLNTDMYgISNdEVRriassdkfadllqhcql 326
..................igfppTywsyrgs.....sekkrtpsrlDril
+++ +++ ++ +++++ +f+pTy+++ g+++ ++sek+r+p+++Dril
C16C2.3 327 reqmargtvfkdfeepstLPFRPTYKYDCGTntwdtSEKGRVPAWTDRIL 376
vsg.ll.rvvsl.ille....vlgSDHrPvlatl<-*
+ ++ + + + ++ +++++SDH+Pv+a +
C16C2.3 377 TFKkYPqVGLESiRPMVsidtITISDHKPVRAMF 410