hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C18E9.2
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Query:  C18E9.2  CE05294   Drosophila translocation protein 1 like status:Partially_confirmed TR:Q18093 protein_id:CAA93853.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Sec62    Translocation protein Sec62                    520.1   1.6e-152   1
IL15     Interleukin 15                                   4.7        1.3   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IL15       1/1     153   172 ..   120   140 .]     4.7      1.3
Sec62      1/1      85   318 ..     1   251 []   520.1 1.6e-152

Alignments of top-scoring domains:
IL15: domain 1 of 1, from 153 to 172: score 4.7, E = 1.3
                   *->EeknikeFlqsFvHivqmFin<-*
                      Eek +k+     vH+vq F+
     C18E9.2   153    EEKKKKKVK-LLVHEVQAFVD    172

Sec62: domain 1 of 1, from 85 to 318: score 520.1, E = 1.6e-152
                   *->lkkqfFFRaKkvvraLeeekykkkkdKgkeessKEEDkkvkKepins
                      ++kq+FFRaKk+v++++e+k+k      +++ss    ++v+K+p+++
     C18E9.2    85    NSKQLFFRAKKLVAKKKENKDK------GNDSS----AEVTKSPKGV 121

                   rekaiekaKeekkdtmaervdKeGDGGlpkqeekkekkKkkkKkvkLqvh
                   +ek+++kaKee+++t+ae+++Ke     +k++ekk+++Kk kKkvkL+vh
     C18E9.2   122 VEKRNKKAKEEETATEAEGDEKE-----VKKDEKKDEEKK-KKKVKLLVH 165

                   pnQaFlDgdevYVWiYdPvPlmtyiiGvllRKFSLFDLLFPALEmiqvla
                   ++QaF+D+++vYVW++dP+Plm++iiGvl+RKFSLFDLLFPALEmiq+++
     C18E9.2   166 EVQAFVDDKDVYVWVFDPTPLMKKIIGVLMRKFSLFDLLFPALEMIQFVG 215

                   vlAlvLFPLWPvflRkGVYYLSvGalGflalifvlAIlRlILFvIiwavt
                   +++++LFPLWPv+lR+GVYY+S++++G++a+i+v+AIlR+ILF+Ii+avt
     C18E9.2   216 TIVGCLFPLWPVWLRQGVYYVSITGIGCFAAIIVTAILRTILFGIIYAVT 265

                   gGkhgfWiFPNLteDVGFldSFkPLYtweykgddekseaKKdkKsKkkkk
                   +Gkh++W++PNLteD+G+l+SF+P+Yt+ey+gd ek+eaKKdkK+Kk+kk
     C18E9.2   266 FGKHKLWVLPNLTEDCGVLESFQPWYTYEYVGD-EKKEAKKDKKDKKSKK 314

                   KKes<-*
                   +K+s
     C18E9.2   315 EKDS    318

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