hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C24F3.1a
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Query:  C24F3.1a  CE18517    status:Partially_confirmed TR:Q9U3P5 protein_id:CAA18770.1

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
LAG1      Longevity-assurance protein (LAG1)            270.1      3e-77   1
OAD_gamma Oxaloacetate decarboxylase, gamma chain         3.8        6.4   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
OAD_gamma   1/1     314   354 ..    14    66 ..     3.8      6.4
LAG1        1/1     143   368 ..     1   237 []   270.1    3e-77

Alignments of top-scoring domains:
OAD_gamma: domain 1 of 1, from 314 to 354: score 3.8, E = 6.4
                   *->GiVflfLiiLi.yairgmsklvnrkkPvkpEppaapaaspRqEEEKv
                      ++V+l L++L ++++  m+++  + +  k+E+++++a
    C24F3.1a   314    AVVLLQLFLLYsFVVFHMGRFRESNA--KKEKKKSAA---------- 348

                   aapAAvp<-*
                    a+AAvp
    C24F3.1a   349 -AAAAVP    354

LAG1: domain 1 of 1, from 143 to 368: score 270.1, E = 3e-77
                   *->lyvlyCs..epylWfsdpkscVWegwgDqYPh..qpmsfslkayYli
                      +y+++ ++ e+   fs++ks+ W g    YP+++++ms ++k+y+++
    C24F3.1a   143    FYIVS-ErlED---FSEVKSV-WLG----YPTehRVMSAAYKLYFIF 180

                   QlaFYlhQSllatLffdvr...RkDFwemlvHHiiTliLFHIvlSYvfNf
                   Q+++++hQ++ ++L+  +r++ R+++++ ++H    +++  I+++Y+fNf
    C24F3.1a   181 QISYWIHQFPEFYLQKLKRdeiRQKSVQAILH----IAF--ISIAYFFNF 224

                   tRvGlliLlLHDaSDvlLEiaKllkYagfegnsYyklyaLladalFvlFa
                   tRvGl++++L+++++ +++ia++++++g++g         l d++F lF+
    C24F3.1a   225 TRVGLALITLEYITQLIFHIARFAHFVGRKG---------LSDPAFKLFN 265

                   ivfvltRLiiyPfwIlrstltealeligaespepdpfyynfq.avirlpl
                    +fvl+RL      I+++++t++++l++aesp++d++++nf++avirl++
    C24F3.1a   266 GSFVLVRLGS----IIIAVMTFWYGLRQAESPFVDISAGNFNtAVIRLNV 311

                   FnlvLLliLqlLhiyWfylIlRFm..............ayrvltdrGelt
                   + +v+Ll+L+lL+ ++++++ R +++++ +++++++  a+++++ ++e+
    C24F3.1a   312 LLAVVLLQLFLLYSFVVFHMGR-FresnakkekkksaaAAAAVP-KKEK- 358

                   eDvRSDsEsdde<-*
                     +R+DsEsd++
    C24F3.1a   359 --KRQDSESDSK    368

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