hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C26F1.2
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Query:  C26F1.2  CE30734   cytochrome P450 status:Partially_confirmed TR:Q27472 protein_id:AAB37074.2

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
p450     Cytochrome P450                                292.0      1e-90   2
FDX-ACB  Ferredoxin-fold anticodon binding domain         5.8        4.1   1
Bcl-2    Apoptosis regulator proteins, Bcl-2 family       1.3        9.8   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
p450       1/2      93   249 ..    36   209 ..    56.0  6.7e-17
Bcl-2      1/1     251   263 ..     1    13 [.     1.3      9.8
FDX-ACB    1/1     330   349 ..    63    82 ..     5.8      4.1
p450       2/2     301   548 ..   229   494 .]   235.9  3.4e-73

Alignments of top-scoring domains:
p450: domain 1 of 2, from 93 to 249: score 56.0, E = 6.7e-17
                   *->ifrlylGsrpvvvlsgpelvkevLikkgeefsgrpdeawfatlsvpf
                      i+ l++G+ p+v+l+  e+++ vL         ++ +++ +     +
     C26F1.2    93    IMLLWIGPVPIVFLGTSECIRPVLESN-----TNISKPSQYDKMSEW 134

                   rgkgilfsdgGprWkalRrlltptfrsfgmgklkslepriqeeaddlver
                   +g g+l+s+  ++W  +R++ltptf++    + + + p++ + a++l ++
     C26F1.2   135 IGTGLLTSTH-EKWFHRRKMLTPTFHFT---IIQDYFPVFVRNAEVLADA 180

                   lrktagepgsgrviditellsravlnvIcsilFgvrfdsledeealplvk
                   ++ +++ +     +d ++++ r++l++Ic +++g++++  +  ++ ++v
     C26F1.2   181 VELHVDGD----YFDAFPYFKRCTLDIICETAMGIQVN-AQLGHNNEYVH 225

                   lvqellllvsspdhqlldlfp.lllylp<-*
                   +v+ ++++v    +++  +++ +l++++
     C26F1.2   226 AVKRISEIV----WNHMKFPWlWLKPIW    249

Bcl-2: domain 1 of 1, from 251 to 263: score 1.3, E = 9.8
                   *->LrraGdelekrve<-*
                      L+ +G+e++++v+
     C26F1.2   251    LTGLGFEFDRNVR    263

FDX-ACB: domain 1 of 1, from 330 to 349: score 5.8, E = 4.1
                   *->LvyRspeRTLtdeEvneahe<-*
                      L+++  e TL+de+++e+++
     C26F1.2   330    LTIQKEEGTLSDEDIREEVD    349

p450: domain 2 of 2, from 301 to 548: score 235.9, E = 3.4e-73
                   *->klieerretldddgeee.ekkksprdfldalllaknaemeeekdger
                      ++i+er+e l++dg   +   k+++ fld+ll  +       k+++
     C26F1.2   301    QVIQERKELLNEDG--NeASEKKRKAFLDLLLTIQ-------KEEG- 337

                   eselsdeelaatvldllfAGteTTsstlswaLylLakhPevqaklreEid
                     +lsde+++ +v++++f+G++TTss++ +++++L  +Pe q+kl++E+d
     C26F1.2   338 --TLSDEDIREEVDTFMFEGHDTTSSGIGFTILWLGFYPECQKKLQKELD 385

                   evigdhrkeisptydDlqnmPyldavIkEtLRlypvvpnlllpRvatkDt
                   ev+g      +p++dD+++  yl+ +IkE+LR++p vp  l+ R++++D+
     C26F1.2   386 EVFGFETNQ-PPSMDDIKKCSYLEKCIKESLRMFPSVP--LIARRLSEDV 432

                   eigG.....ylIPKGtlVivnlyslhrDpkvfpnPeeFdPeRFldengta
                   +i+ +++++ ++P+G    v++ ++ rDp  +p+P++++P++F+ ++
     C26F1.2   433 TINHpsgqkIVLPAGLAACVSPIAAARDPRAWPDPDTYNPDNFDIDAI-- 480

                   ivnfkrksfaflPFGaGpRnClGerlArmElflfLatlLqrFeleplpgv
                     +  r+++a++PF+aGpRnC+G+ +A +E + +L+t+ +++e+e l+
     C26F1.2   481 --AG-RDPYAYIPFSAGPRNCIGQKFALLEQKTILSTFFRKYEVESLQTE 527

                   dpppidetpiisglvlppkpyklkf<-*
                   + + + +      +++p+ + k+k+
     C26F1.2   528 ENLRPVPEL----ILRPYNGMKIKI    548

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