hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C34F6.4
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Query:  C34F6.4  CE15673  locus:hst-2  status:Partially_confirmed TR:O17645 protein_id:CAB03945.1

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
HS2ST        Heparan sulfate 2-O-sulfotransferase (HS   348.6   6.7e-101   1
CTP_transf_1 Cytidylyltransferase family                  3.2        9.2   1
FGGY_C       FGGY family of carbohydrate kinases, C-t     3.0        9.4   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
CTP_transf_1   1/1       3    26 ..     1    24 [.     3.2      9.2
FGGY_C         1/1     241   273 ..   201   234 .]     3.0      9.4
HS2ST          1/1      30   287 ..    88   368 ..   348.6 6.7e-101

Alignments of top-scoring domains:
CTP_transf_1: domain 1 of 1, from 3 to 26: score 3.2, E = 9.2
                   *->lkkRiitaivliliflillllggl<-*
                      +kkR++  + +i++f+++lll +l
     C34F6.4     3    WKKRKVLYFAGISVFILILLLLKL    26

FGGY_C: domain 1 of 1, from 241 to 273: score 3.0, E = 9.4
                   *->aeVGvfeslaEasqalnlerkkhyPpeteveeyq<-*
                      a+ G f+sl++ +++l++++kk++P+ +  + ++
     C34F6.4   241    AL-GHFDSLDANRAHLRYTKKKIPPNDQTLSMIR    273

HS2ST: domain 1 of 1, from 30 to 287: score 348.6, E = 6.7e-101
                   *->rdlknldfeeqlvVvYNRVPKtGSttFvn.llrdLsekNkFhvlhin
                      +  ++ +  ++ +V+YNR+PKtGSttF+n +++dL + N+F vlh n
     C34F6.4    30    PKANVWPTSSK-IVIYNRIPKTGSTTFTNaIAYDLYKENGFSVLHVN 75

                   vtkNktvlsledQvqfvkEVNIStweEMKPslfhgHvaFLnFsKFglkdk
                    tkN  v+sl+dQ  fv   NI+tw E  P+++hgHvaF +F +Fg++
     C34F6.4    76 MTKNRQVMSLPDQYTFVN--NITTWTERLPAFYHGHVAFIDFQRFGIA-N 122

                   PIYINvvRDPveRlvSyYYFlRFGDyfveyraaFPdLrrPlmrkagrKkd
                   PIYIN++R P+eRl+S YYFlR GD   +yr    +L r    +ag+  +
     C34F6.4   123 PIYINIIREPLERLLSHYYFLRYGD---NYR---IGLKR---SRAGNNET 163

                   FdECVlegdpeCspkrlwlVEGiGDHRRqIPFFCGHdaECwepGseWALe
                   FdEC   g+ +C+ k++w          qIP+FCGH   C+e+G   AL
     C34F6.4   164 FDECYSRGGKDCDMKQMWI---------QIPYFCGHYHFCTEVGNPEALR 204

                   rAKfNveneYfLVGVlEeLedfllLLErfLPRfFkGvrdiYktPEHskks
                    AK Nv + Y+LVG +  + d + LLE  +P fFkG++ +       +
     C34F6.4   205 VAKQNVLEKYLLVGTTSRMRDMIALLEVTVPDFFKGALGHFDS-LDANRA 253

                   hlrvTkkKlKpPssetvkklqqrnIwrmEnEFYeF<-*
                   hlr TkkK  pP  +t   + + ++++mE EFY+F
     C34F6.4   254 HLRYTKKKI-PPNDQTLSMIRRDEVYKMEREFYDF    287

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