Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm1/seq/C37H5.2
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Query: C37H5.2 CE30737 status:Partially_confirmed TR:P91143 protein_id:AAB42366.2
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
abhydrolase alpha/beta hydrolase fold 85.9 2.4e-25 1
Peptidase_S9 Prolyl oligopeptidase family 6.0 1.4 1
CRAL_TRIO_N CRAL/TRIO, N-terminus 5.5 2.4 1
Esterase Putative esterase 4.7 2.8 1
LexA_DNA_bind LexA DNA binding domain 4.7 2.7 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CRAL_TRIO_N 1/1 125 143 .. 71 89 .] 5.5 2.4
Peptidase_S9 1/1 141 154 .. 68 81 .] 6.0 1.4
Esterase 1/1 145 165 .. 142 162 .. 4.7 2.8
LexA_DNA_bind 1/1 186 199 .. 1 15 [. 4.7 2.7
abhydrolase 1/1 98 332 .. 1 232 [] 85.9 2.4e-25
Alignments of top-scoring domains:
CRAL_TRIO_N: domain 1 of 1, from 125 to 143: score 5.5, E = 2.4
*->iemftktlkWRrEfGvnei<-*
+em+++++ WR ++++ +
C37H5.2 125 KEMIEAIEQWRVKMNLEKM 143
Peptidase_S9: domain 1 of 1, from 141 to 154: score 6.0, E = 1.4
*->kriaifGgSnGGlL<-*
+++ + G S GG+L
C37H5.2 141 EKMNLVGHSFGGYL 154
Esterase: domain 1 of 1, from 145 to 165: score 4.7, E = 2.8
*->laGqSmGGlgALylAlkyPer<-*
l+G+S+GG+ + +AlkyP r
C37H5.2 145 LVGHSFGGYLSTSYALKYPKR 165
LexA_DNA_bind: domain 1 of 1, from 186 to 199: score 4.7, E = 2.7
*->MkpLTeRQrevLdfI<-*
++LT+RQ+ ++ +I
C37H5.2 186 -EKLTKRQKALFWVI 199
abhydrolase: domain 1 of 1, from 98 to 332: score 85.9, E = 2.4e-25
*->frvillDlrGfGeSsp...sdlaeyrfddlaedlealldalglekpv
+ v+++Dl+GfG+Ss+++ s+++e+ +++e++e+++ + +lek
C37H5.2 98 QNVYAIDLPGFGRSSRtkfSTDPETAEKEMIEAIEQWRVKMNLEK-M 143
ilvGhSmGGaialayaakyPelrvkalvlvspplpaglssdlfprq.gnl
+lvGhS+GG +++ ya+kyP+ r+ +l+l++p +++ +++f + + +
C37H5.2 144 NLVGHSFGGYLSTSYALKYPK-RIENLILADP-WGFTDVDPSFLEKlTKR 191
eglllanfrnrlsrsveallgralkqffllgrplvsdflkqaedwlssli
++ l++ + + + l g+++ l++r + + k+ ed +++++
C37H5.2 192 QKALFWVILKFNPLAALRLVGGYG--PSLMKRLRPDLEQKYSEDVYDYIY 239
rq.geddggdgllgaavalgkllqwdls.alkd.....ikvPtlviwgtd
++ ++ g + l+ +l w++ + k+ ++ + +vP+ i+g+
C37H5.2 240 LAnSGNPTGEIIFK---SLSENLRWAKNpMSKRfheldKTVPVKFIHGGM 286
DplvpldaseklsalipnaevvviddagHlallekpeevaeli.kfl<-*
+ v++++++ + + ++e ++i++agH+++ ++ +++ el+ l
C37H5.2 287 SW-VDWKTTREMFGSMDHVESHIIEGAGHHVYADDTDRFVELViGSL 332