Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm1/seq/C47D12.1
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Query: C47D12.1 CE05429 Yeast YHP9 like status:Partially_confirmed TR:Q18667 protein_id:CAA93765.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
FAT FAT domain 731.2 4.4e-216 1
PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase 218.9 7.5e-62 1
FATC FATC domain 45.4 1.1e-13 1
DUF577 Family of unknown function (DUF577) 6.6 0.98 1
Pox_F12L Poxvirus F12L protein 5.5 0.55 1
Vps26 Vacuolar protein sorting-associated p 5.4 0.49 1
SPK Domain of unknown function (DUF545) 5.1 4.5 1
Carn_acyltransf Choline/Carnitine o-acyltransferase 1.7 8.3 1
wnt wnt family 0.6 8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Carn_acyltransf 1/1 430 446 .. 658 674 .] 1.7 8.3
wnt 1/1 587 593 .. 346 352 .] 0.6 8
SPK 1/1 673 686 .. 1 14 [. 5.1 4.5
Vps26 1/1 1425 1462 .. 1 40 [. 5.4 0.49
Pox_F12L 1/1 1851 1880 .. 586 619 .. 5.5 0.55
DUF577 1/1 2217 2247 .. 1 31 [. 6.6 0.98
FAT 1/1 2685 3296 .. 1 722 [] 731.2 4.4e-216
PI3_PI4_kinase 1/1 3592 3886 .. 1 335 [] 218.9 7.5e-62
FATC 1/1 3912 3944 .] 1 33 [] 45.4 1.1e-13
Alignments of top-scoring domains:
Carn_acyltransf: domain 1 of 1, from 430 to 446: score 1.7, E = 8.3
*->adrfakyLekaLldmrd<-*
++r+ ++L ++L+ m +
C47D12.1 430 SARLLNSLAESLCKMDS 446
wnt: domain 1 of 1, from 587 to 593: score 0.6, E = 8
*->vevhtCK<-*
+++htCK
C47D12.1 587 YIMHTCK 593
SPK: domain 1 of 1, from 673 to 686: score 5.1, E = 4.5
*->aeltrfmdFLvekT<-*
+++ mdFL+e++
C47D12.1 673 EIFEKYMDFLIERI 686
Vps26: domain 1 of 1, from 1425 to 1462: score 5.4, E = 0.49
*->FGppidIeIkldngeeRKtVev.ktedGkveknpvyedgEt<-*
++ id I+l g+e+K++e+ + + +k++ vye++E+
C47D12.1 1425 -KQYIDKGIEL--GDEHKMIEIlALRSSKITVDQVYESDES 1462
Pox_F12L: domain 1 of 1, from 1851 to 1880: score 5.5, E = 0.55
*->dlvnllerlfslllAllaelspssvlSAlfyaFA<-*
d nl++rl s + + ++ls+++v +fy ++
C47D12.1 1851 D--NLVARLTSVIDSHRNYLSDGMVI--VFYQLC 1880
DUF577: domain 1 of 1, from 2217 to 2247: score 6.6, E = 0.98
*->mreLqPLLIsCLkeegisesmfKvLgevVnh<-*
mr+Lq LI CL m + ++V++
C47D12.1 2217 MRQLQRPLIQCLNNGAQNFKMTRLVTQIVSR 2247
FAT: domain 1 of 1, from 2685 to 3296: score 731.2, E = 4.4e-216
*->llgeislkckayarallylEssirkkpgqaekektrepkva.....d
l+++is+k++++++++++lE++i+++p+q+++++ re+kva++ +d
C47D12.1 2685 LIEFISSKHECWHTGIRLLENHIWTIPKQLNNTLLREMKVApglagD 2731
istlesLqeiYnsigepDslaGvlrrrarepidmR.m.sltqkilwyEkl
i+tlesL ++Yn+i+e+D++a++++rra +p++mR m++++++++++ ++
C47D12.1 2732 IETLESLGTLYNEISEFDQFAAIWERRAVFPDTMRaMsAMQLGDMELAQS 2781
gtWedFFAlacYeeaekksdsgnTse.ektspeategeiksledlGewsq
+++++ + ++Ye+++++ +++nTs++ek++++++++e+++++++ +++
C47D12.1 2782 YLEKS--MSSTYETLAPTINPNNTSNsEKHVSPIIDKEYDHWMEM--YIT 2827
llsklqkkWdvleylrnekddelaekysigleAalaaeaaWrlgdWnvee
++s+l+ +W+++++++n+kd+++ + +++aa++++dWnv+e
C47D12.1 2828 NCSELL-QWQNVADVCNGKDMQHVR---------GLINAASHIPDWNVVE 2867
dsleqyvgsvmketsldkeaQlfraldlalrndefsetlyghiekardel
++++q++g+++++++ld++ lf+++ +++++++++ ++++h++++++++
C47D12.1 2868 ECKSQIAGCIPPSFHLDYT--LFNLM-STVMRMNEN-SSPTHMKERCKIA 2913
ineleelsaakwesypferaYkeHvslLvklqmlnELeesieiykklse.
i+e++e ++++w+++p + ++++Hv++L+ +++++E+ees++i+ +l e
C47D12.1 2914 IQECTEAHISRWRALP-SVVSYGHVKILQAMNLVREIEESTDIRIALLEa 2962
pnqnnldsqlkdiK.lllgWrkRlpgcqdddvdiwepilalRrlvlspke
p+++ ++ + d+K+l++++r+R+p+++d d+ ++++++++R++++ ++
C47D12.1 2963 PSNKVDQALMGDMKsLMKVFRNRTPTTSD-DMGFVSTWYDWRNQIHGMML 3011
qkleawlklasncrksgrkslsnavlarllgslqraspvsikakllhaae
q++e+w+k++ n+ +g n++++++++++q++ +v ak+++++
C47D12.1 3012 QRFEYWDKVGLNVAATG-----NQSIVPIHSMAQAQLAV---AKHAKNLG 3053
vhnlpevlyeqlkllwakgmkdindelnelskllrelskcagyeqgnpkl
+hnl+++l+++l+ l+a++m+d++d+++++ k+lr+++++a++e++++
C47D12.1 3054 FHNLTKDLLNKLAGLTAIPMMDAQDKVCTYGKTLRDMANSAADERVKN-- 3101
eelkvaLevvsltkaetlgsPflaetknkllkagelkkrfqsvlralste
e l++aLev++++ ++++ ++++++ + + +++ +++svl++
C47D12.1 3102 ELLCEALEVLEDV---RIDD-LQKDQV---AALLYHRANIHSVLDQA--- 3141
ekalqayyeDatqldknwassgvveykawhkwGlfnfeavsksvlpllta
e+a++++++ a+ql ++++s++++++k +++wG++++++ +
C47D12.1 3142 ENADYTFSA-ASQLVDLQNSVTTTGIKLMKNWGHHLYKR----------F 3180
fkralqeeqpkkehkgptagntsevesqessvspsldkkrnevkvklknq
f+++ ++e ++n+
C47D12.1 3181 FSTTVCKE--------------------------------------TGNN 3192
flvnAlrcfltslrlsnkvvdssklqdllrkitdLWLdkgdksdgeesgv
f ++Al+c+++++r++n+ +k++++++ki LWL+k+++++g++
C47D12.1 3193 FGRQALACYFIAARVDND----IKARKPIAKI--LWLSKHLNACGSH--- 3233
rklkfkrlesqikkllekinslvtkfitaiptynWLtvipQLisrlstkh
e++n++++k+ ++++ +nWL+++pQL+++++ +
C47D12.1 3234 ----------------EVMNRVIKKQLHSLNLFNWLYWLPQLVTDVR--Y 3265
penevvqrllmhilskialayPqallyqltaasks<-*
++n++++ +il+k+a+a+P +++y++++a++
C47D12.1 3266 KPNSNFV----LILCKMAAAHPLQVFYHIREAVSV 3296
PI3_PI4_kinase: domain 1 of 1, from 3592 to 3886: score 218.9, E = 7.5e-62
*->gyafifKgGdDlrsrqDervlQliaVFKPkDEEPyAplNPkgtkwsh
+ af++K+ ++rv Q++
C47D12.1 3592 SAAFYLKKSVQDE--PTNRVPQMF----------------------- 3613
GerlmnkllkgegldrrRnlqltaYlviplgsrsGlie............
++++++l++++++ r + ++ + l++r+G+ + + + ++
C47D12.1 3614 --KHLDHVLQTDRESAR----RHLHAPTVLQMRVGQKTtlyevasvqpya 3657
......wvpnattlaeipptyvvkksfkpfnysdfmraklkttn.qlsk.
+++ + ++a ++++++p++v++++f+ ++y+d+m+ ++++++ q+s++
C47D12.1 3658 mppdctRNYPASQIDIVHPYDVLTATFNGSYYPDDMVLHFFERFaQSSSs 3707
nakll.k.ehkdllqmapdrkqltllekvevFeealsntpkpgllqwFvk
++++l++++++d+++++p++++++++++++++++a++++p+++l++++++
C47D12.1 3708 IGQPLpTpTNQDGTVAPPRLTEAHHIKNIIYEDFARDMIPFRLLYDYLTA 3757
kfpdaapyeewfarfeeLtearknfvrScAgmsvldYiLgngDRHldNiL
++pd+ +++a ++k+ +S+A++s + Y+++++ +++d ++
C47D12.1 3758 RYPDP---VMYYA-------MKKQLLHSLAVLSTIEYHCNLTPMGPDQMM 3797
vkkdkktGklfHIDFGlcfp..hskgkrgekpervPFrLTrWPQaklpfv
+ ++ tG l + + +++s + ++++ ++vPFrLT+ +++
C47D12.1 3798 M--TMNTGVLSNPSYRFEIRggRSLHDIQHFGHEVPFRLTP------NLS 3839
eamggyiasLgpsgdeglFrelceeayralRrnlnlltnlLkqkavarGl
+ g+ +d +l++++ +++++++++++++L
C47D12.1 3840 ILV-------GVAQDGDLLWSMAAASKCLMKKEPEVIMRPL--------V 3874
lmledglpdwrs<-*
++ ++++ d+ +
C47D12.1 3875 WDEFANNTDCDK 3886
FATC: domain 1 of 1, from 3912 to 3944: score 45.4, E = 1.1e-13
*->epLsvegqvedLIqqATspeNLarmYiGWcpfl<-*
+++ +++++++LI++A++++NLarm++++++++
C47D12.1 3912 DAKLRKDDCVSLISRAKDSDNLARMPPTYHAWF 3944