hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/C54C8.4
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Query:  C54C8.4  CE08967   glycosyltransferase status:Partially_confirmed TR:O02232 protein_id:CAB05466.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
DUF273          Protein of unknown function, DUF273     542.8   5.8e-172   1
Pyridox_oxidase Pyridoxamine 5'-phosphate oxidase         1.3        7.4   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Pyridox_oxidase   1/1     291   299 ..   230   238 .]     1.3      7.4
DUF273            1/1      89   310 ..     1   238 []   542.8 5.8e-172

Alignments of top-scoring domains:
Pyridox_oxidase: domain 1 of 1, from 291 to 299: score 1.3, E = 7.4
                   *->gWklkRLaP<-*
                      gWk + LaP
     C54C8.4   291    GWKMRQLAP    299

DUF273: domain 1 of 1, from 89 to 310: score 542.8, E = 5.8e-172
                   *->VrCYaKihnYefvlavlDtdkrvkfeCqqkDklfFRRHCivAkiLpd
                      V+CYaK+h+Yefvl++ D++    f+C+++++++FRRHC++AkiL+d
     C54C8.4    89    VECYAKAHGYEFVLTN-DSN----FGCDHIKINIFRRHCVLAKILVD 130

                   yDntavLfLDADiGVVNPkRkIEEFldeDqgvDIiFydRFyNWEIaaGsY
                   y+  av+++D+D+G+VNPkR+I+E+++e  ++DI+FydR++++E+a+ +Y
     C54C8.4   131 YE--AVVHIDGDMGIVNPKRRIQEYMTE--SSDIVFYDRHFAPEVAM-CY 175

                   lvRNTeyAinlLneFAdYEskLPnSFhGtDNGALHiflaeklfPqasiei
                   +v+NTeyAi+lLneFA+YE+kLPnS+hG++NGALHiflaeklfP+++i+i
     C54C8.4   176 IVKNTEYAITLLNEFAEYERKLPNSSHGSENGALHIFLAEKLFPHNQIDI 225

                   dlCrkayekLeFnSknyedlfTYEaCIrallGastdFPgKvRILkKvGTG
                   d+Cr+a+e    nS+n++d+f+Y++CIra++Gas+dF +K+RIL+K GTG
     C54C8.4   226 DVCRIAWE----NSWNIVDQFAYTHCIRAIFGASIDF-DKIRILRK-GTG 269

                   WARDGWLTssvWhpeiDFMLHGWKtnqLretPngilrpkem<-*
                   +ARD+W+T++vW+pe+DFMLHGWK++qL++tP+g++++++m
     C54C8.4   270 FARDDWITGGVWSPERDFMLHGWKMRQLAPTPAGVVKAGAM    310

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