hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/E04F6.7
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Query:  E04F6.7  CE01219  locus:dhs-7 Ribitol dehydrogenase status:Partially_confirmed TR:Q19062 protein_id:AAA68362.1

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
adh_short short chain dehydrogenase                      76.0    1.8e-20   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
adh_short   1/1      27   164 ..     1   144 [.    76.0  1.8e-20

Alignments of top-scoring domains:
adh_short: domain 1 of 1, from 27 to 164: score 76.0, E = 1.8e-20
                   *->tgKvaLvTGassGIGlaiAkrLakeGakVvvvdrreekaeqvaaelk
                      +gK+ +vTG +sGIG ++A+ L   Ga+Vv++ r++e+ e+  +++
     E04F6.7    27    AGKTFVVTGTTSGIGIETARSLSLNGAHVVMLNRNLEESEKLKKKIV 73

                   aelG.dralfiqlDvtdeeqvkaavaqaverlGdrlDvLVNNAGilgdgp
                   +e  ++++  i++D+ +  +vk+a++  + +    ++ L+ NAG+ g  +
     E04F6.7    74 EEMNdAEIDIIECDLNSLHSVKKAAEVYISKKW-SIHCLILNAGVFG--T 120

                   pfeelseedwervidvNltGvflltravlpamdhmlkrkgGrIvNisS<-
                   ++   +++  e+ +++N  + fll +++lp           rIv +sS
     E04F6.7   121 ASK-TTVDGLESHFAINHLSHFLLIQELLP---IVRQSIPSRIVLVSS   164

                   *

     E04F6.7     -   -

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