hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F08F3.7
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Query:  F08F3.7  CE09262   cytochrome P450 status:Partially_confirmed TR:Q27531 protein_id:AAB04873.1

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
p450         Cytochrome P450                            357.5   3.2e-111   1
Pox_H7       Late protein H7                              4.7        3.3   1
Peptidase_C9 Peptidase family C9                          3.9          2   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Pox_H7         1/1      75    83 ..   143   151 .]     4.7      3.3
Peptidase_C9   1/1     185   200 ..   194   209 .]     3.9        2
p450           1/1      27   489 ..     1   494 []   357.5 3.2e-111

Alignments of top-scoring domains:
Pox_H7: domain 1 of 1, from 75 to 83: score 4.7, E = 3.3
                   *->DYeYIKDac<-*
                      DYe IK+a+
     F08F3.7    75    DYEHIKEAF    83

Peptidase_C9: domain 1 of 1, from 185 to 200: score 3.9, E = 2
                   *->ehkekrgarveklvnk<-*
                      ++k+  ++r+ek+v+
     F08F3.7   185    HYKYEDAGRFEKFVKV    200

p450: domain 1 of 1, from 27 to 489: score 357.5, E = 3.2e-111
                   *->PpgP.plPlfGnllqlgrgkdilhsvltklrkkYGpifrlylGsrpv
                      P gP plP+fGnllq+    d+++++l kl+k+YGp+f+++  + p+
     F08F3.7    27    PKGPfPLPFFGNLLQFP--ADNIQEHLDKLSKTYGPCFTVW-TPLPA 70

                   vvlsgpelvkevLikkgeefsgrpdeawfatlsvpfrgkgilfsdgGprW
                   vvl+++e++ke+++++g+ f++r ++     ++ p+ + g++fs+g + W
     F08F3.7    71 VVLTDYEHIKEAFVTQGDAFVNRAQRLPEILFQ-PHPNTGVVFSSG-DNW 118

                   kalRrlltptfrsfgmgklkslepriqeeaddlverlrktagepgsg.rv
                   k +Rr  ++ +r+f    l     + +++++  +e+l ++   +  +++
     F08F3.7   119 KIQRRTALKILRDF---GL-GRNLMEEQVMRSVHEMLAQLEHIS--DkKN 162

                   iditellsravlnvIcsilFgvrfdsledeealplvklvqellllvsspd
                   +d++  ++++v nvI+  lFg ++   +  +++++vk v+  l++ +
     F08F3.7   163 VDMYWPIQLCVGNVINESLFGYHYKYEDAGRFEKFVKVVDRHLKIAQGNA 212

                   hqlldlfplllylpgphlrkfkearkelkdyldklieerretldddgeee
                     l+  fp+l+ lp      ++ + + +k y +++ ee+ ++l+
     F08F3.7   213 SLLVSAFPWLRHLPVIGNLGYHSIKNNIKSYQQFIEEEVTSQLKNY---- 258

                   ekkksprdfldalllaknaemeeekdgereselsdeelaatvldllfAGt
                   +  + p +f  a ++     m+++ +      l++++l a+vld+  AG+
     F08F3.7   259 DGESEPENFVHAYMQQ----MKQTGNPN----LDMTNLCASVLDFWLAGM 300

                   eTTsstlswaLylLakhPevqaklreEidevigdhrkeisptydDlqnmP
                   eT s+ l+w+L++++k+Pevq+k+r+Ei e ig +r    p+++D qnmP
     F08F3.7   301 ETASNSLRWHLAFMMKYPEVQDKVRNEIFENIGTAR---LPSMSDKQNMP 347

                   yldavIkEtLRlypvvpnlllpRvatkDteigGylIPKGtlVivnlyslh
                   y++avI+E++R +  vp +l +++ t+D+ +  ++IP Gtl +  ++s++
     F08F3.7   348 YTQAVIHEVQRCSNMVP-ILATHMNTEDVLVKEHNIPTGTLLFAQIWSVL 396

                   rDpkvfpnPeeFdPeRFldengtaivnfkrksfaflPFGaGpRnClGerl
                   +++ vf++  +F+P+R l ++g+ + n+    ++ +PF+ G+RnC+Ge+l
     F08F3.7   397 KNDPVFEENSKFNPDRYLMPDGKTL-NK-TVLERTIPFSVGKRNCVGEGL 444

                   ArmElflfLatlLqrFeleplpgvdpppidetpiisglvlppkpyklkf<
                   ArmElfl++++l+q++e+ p   vd +p++ +     ++ +p +++l
     F08F3.7   445 ARMELFLIFSALIQKYEFIPKTNVDLKPVYGG----VITVKPYLCELVP  489

                   -*

     F08F3.7     -    -

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