hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F10C2.5
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Query:  F10C2.5  CE09309   mannosyl-oligosaccharide alpha-1,2-mannosidase status:Partially_confirmed TR:P90830 protein_id:CAB04078.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
Glyco_hydro_47 Glycosyl hydrolase family 47             839.8   9.5e-249   1
TrkA-C         TrkA-C domain                              5.0        5.3   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
TrkA-C           1/1      90   112 ..    69    91 .]     5.0      5.3
Glyco_hydro_47   1/1      49   492 ..     1   515 []   839.8 9.5e-249

Alignments of top-scoring domains:
TrkA-C: domain 1 of 1, from 90 to 112: score 5.0, E = 5.3
                   *->DvLlvvGkpedlerlekllggkv<-*
                      D+Llv+G++ + +r+  l+++k
     F10C2.5    90    DTLLVMGNTTEFRRAVSLVLEKA    112

Glyco_hydro_47: domain 1 of 1, from 49 to 492: score 839.8, E = 9.5e-249
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrddPsnlhssdifGesnlg
                      MF+HA++gY+++A++ DELkPi+c+g           +d++G  +++
     F10C2.5    49    MFYHAYNGYLDHAFPLDELKPITCVG-----------QDTWG--SFS 82

                   aTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTIRv
                   ++++DaLDTL +MG+++Efr+Av++v e+ ++d   ++ +VsVFEt+IRv
     F10C2.5    83 LSLIDALDTLLVMGNTTEFRRAVSLVLEKARDD---ANVNVSVFETNIRV 129

                   lGGLLSAYaLtgdpkk.lgdvegsdydkmLLkKAvdlAdrLLpAFnTptG
                   +GGL+SA++L+g++k+ ++d+eg+++d++LLk+Av++AdrL+pAFnT+tG
     F10C2.5   130 VGGLISAHMLAGRHKDlVVDWEGYPCDSPLLKLAVKMADRLMPAFNTETG 179

                   IPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdptYek
                   +Py++vNlk+gv+k++t     ++++A++GT+l+EF++LSrLTGd++Yek
     F10C2.5   180 MPYGTVNLKYGVHKDETP----ITCTAGVGTFLIEFGTLSRLTGDDKYEK 225

                   karkardaLwklrcekpeGLypnyinpqtGqqwtqshislGAggDGSfYE
                   +a ka daLw++  ++p+GL++n+in+qtG qwt++++++GAg+D S++E
     F10C2.5   226 VALKALDALWST--RSPIGLVGNHINVQTG-QWTATDSGIGAGVD-SYFE 271

                   YLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfaelkngr
                   YL K+++l+++++l  +++++e++++i+kh+r++++      f+++++ +
     F10C2.5   272 YLAKGAYLFRRPSL--MKQFHEHATSINKHVRKGEW------FMWVSMAK 313

                   fkilehkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeiaitcHe
                                  G++++++++sl+af+pg  ++++ gd+++a++++
     F10C2.5   314 ---------------GSVSLPIFQSLEAFWPG--TLTMVGDVQDASRIML 346

                   mYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypLRPEvi
                   +Y ++++k+G+ p+++n+++e           ++ +++  a++pLRPE++
     F10C2.5   347 TYSEVIRKYGFPPEFYNIHNE-----------EPGEKR--AAFPLRPEMV 383

                   EStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgglssRy
                   ES +yLYR  aTkd++      ++e g+e+++a+e+++R+kcG      y
     F10C2.5   384 ESLMYLYR--ATKDET------WLELGAEMIDAIESSARTKCG------Y 419

                   aglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalq.....vell
                   a+++nV+++si   eDrMESFfLAET+KYLYLlFd+ n+++++++++++l
     F10C2.5   420 ATINNVKEHSI---EDRMESFFLAETTKYLYLLFDPTNFIHskgdqARIL 466

                   pldkctdevng..nwVFNTEAHPlpi<-*
                   +++k++++v+++++++FNTEAHP++
     F10C2.5   467 TSPKNLTCVIYggGYIFNTEAHPVDP    492

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