Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm2/seq/F14E5.4
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Query: F14E5.4 CE03207 acid phosphatase status:Confirmed TR:Q19461 protein_id:CAA91407.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
acid_phosphat Histidine acid phosphatase 30.4 1.4e-07 1
ANATO Anaphylotoxin-like domain 1.1 8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
acid_phosphat 1/1 29 152 .. 7 182 .. 30.4 1.4e-07
ANATO 1/1 361 365 .. 33 37 .] 1.1 8
Alignments of top-scoring domains:
acid_phosphat: domain 1 of 1, from 29 to 152: score 30.4, E = 1.4e-07
*->qmlsRHGdRyPTgSkgatdvktIdkfkesaLngsipinltfpkdpla
q+l+RHG+R+P +++ +++a
F14E5.4 29 QVLFRHGARAP------------------------SNS----LSDPA 47
flptWtddlPvekavgagqLTppYaGmlelvnlGryfrqRYvedgellnn
l + g+g+LT + G + ++lGr ++ RYv d ++ ++
F14E5.4 48 YLANFP--------RGLGELTDR--GFENSFRLGRFLKTRYV-DSKFVDG 86
stpqkevyIrstsleRtidSAeaFiaGlFPPkGvDipnhvdqqaslqtip
++ + y rs + +R + SA + +a++F +D++ h +p
F14E5.4 87 NLKPRQMYWRSVNKNRCLSSASTVGAAMF----EDPSRHL-------YVP 125
ehevpgsndllaylplnsCpafeelaekw<-*
+ + + ++ll y+ +Cp+ el +k+
F14E5.4 126 VLTEEIGENLLNYD-QANCPRELEL-IKE 152
ANATO: domain 1 of 1, from 361 to 365: score 1.1, E = 8
*->FlqCC<-*
Fl+CC
F14E5.4 361 FLDCC 365