hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F15B9.8
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Query:  F15B9.8  CE20686   Thrombospondin type 1 domain status:Confirmed TR:Q9XVU5 protein_id:CAB01426.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
tsp_1    Thrombospondin type 1 domain                    27.2    1.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
tsp_1      1/1      98   141 ..     1    48 [.    27.2  1.2e-06

Alignments of top-scoring domains:
tsp_1: domain 1 of 1, from 98 to 141: score 27.2, E = 1.2e-06
                   *->spWseWSpCSVTCGkGirtRqRtcnspaPqkkggkpCtgdaqeEtea
                      ++W+eW++ S  C +G r+R+Rtc+s++P  +    C gda+e  e+
     F15B9.8    98    GEWTEWTSWS-MCQNGERSRVRTCVSRKP--ALRVVCHGDAIE-IEK 140

                   C<-*
                   C
     F15B9.8   141 C    141

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