hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F32A5.7
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Query:  F32A5.7  CE01277    status:Confirmed SW:Q19952 protein_id:AAC46661.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Sm       Sm protein                                      68.8    4.1e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sm         1/1       6    72 ..     1    55 []    68.8  4.1e-18

Alignments of top-scoring domains:
Sm: domain 1 of 1, from 6 to 72: score 68.8, E = 4.1e-18
                   *->sfLkklidkrVlVeLknGreirGtLkgfDqfmNlvLddveEtl....
                      s+Lk+ +++++lVeLknG++++G+Lk++D +mN++L dv+ t ++++
     F32A5.7     6    SLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSkdgd 52

                   ........liRGnnvvlisp<-*
                   +  + ++ ++RG+++++++
     F32A5.7    53 kffkmseaYVRGSTIKYLRI    72

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