hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F32D8.4
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Query:  F32D8.4  CE31923   lactate dehydrogenase status:Partially_confirmed TR:Q19965 protein_id:CAA98456.2

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Yip1     Yip1 domain                                    226.3    2.4e-64   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Yip1       1/1      98   244 ..     1   179 []   226.3  2.4e-64

Alignments of top-scoring domains:
Yip1: domain 1 of 1, from 98 to 244: score 226.3, E = 2.4e-64
                   *->ldvDtdqiveKlkhVLiPifPsrggvdqqilrdpDLwGPlwfcltLa
                      l++++++i+eK+++VL+P+    g +++++ +d DL+GPl+fcl+++
     F32D8.4    98    LGINFSHIKEKTIAVLNPT----GSATVEVIADQDLAGPLVFCLLFG 140

                   laLllsgklssyliqagekgtygydfrlVttAfgyifgyawfgslvlyll
                   +aLll+gkls                      fg+i+g++ +g++++y+l
     F32D8.4   141 AALLLHGKLS----------------------FGFIYGVGGLGCVGIYAL 168

                   lkLlggkqkinisffqvlsvlGYsLlPlvvlslltilfsllatligilry
                   ++L++ ++k nisf++++svlGY+LlP+++ls++t+++s++    gi++y
     F32D8.4   169 MNLMATDEK-NISFTCTASVLGYCLLPMALLSIVTAVLSFK----GIIGY 213

                   vltalallWStyaasallvsalqndqnkklLv<-*
                   ++++la+lW+++a+s+l+v al++ ++++lL+
     F32D8.4   214 IISSLAVLWCSSASSKLFVIALSM-DHQRLLM    244

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