hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F36A2.1
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Query:  F36A2.1  CE09941    status:Partially_confirmed TR:Q9XVN9 protein_id:CAB03066.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
DUF618   Protein of unknown function, DUF618            114.3    1.2e-35   1
FlgM     Anti-sigma-28 factor, FlgM                       3.8        8.1   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF618     1/1      56   121 ..     1    71 []   114.3  1.2e-35
FlgM       1/1     143   159 ..    86   102 .]     3.8      8.1

Alignments of top-scoring domains:
DUF618: domain 1 of 1, from 56 to 121: score 114.3, E = 1.2e-35
                   *->snnRkKLlNLLYLANDViQnSKvrKgpetFvdeFapvlveAfahvie
                      ++n k+++ L+Y++NDV+Q++K +K+++t++++F+p++++A++   +
     F36A2.1    56    TDN-KRIA-LFYVMNDVVQKAK-MKHADTLIPAFQPAVLTAVG---I 96

                   .egddsvkkkikRvinIWeeRnVFs<-*
                   ++++d+vk+++kR+i+I+++RnVFs
     F36A2.1    97 gRKQDKVKAVMKRCIQIFKSRNVFS    121

FlgM: domain 1 of 1, from 143 to 159: score 3.8, E = 8.1
                   *->YkVDteklAkklldFek<-*
                      ++VD+  l+kk+ +F++
     F36A2.1   143    LEVDSDDLVKKITNFIS    159

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