hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F41B5.3
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Query:  F41B5.3  CE27379   cytochrome P450 status:Partially_confirmed TR:O16671 protein_id:AAG24101.2

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
p450     Cytochrome P450                                314.1    1.2e-97   1
Astacin  Astacin (Peptidase family M12A)                  3.5        3.9   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Astacin    1/1      63    78 ..     1    21 [.     3.5      3.9
p450       1/1      26   490 ..     1   494 []   314.1  1.2e-97

Alignments of top-scoring domains:
Astacin: domain 1 of 1, from 63 to 78: score 3.5, E = 3.9
                   *->rrWpngsGiVvIPYvisssys<-*
                      ++W ++     IPYvi +sy+
     F41B5.3    63    TFWMGN-----IPYVIIGSYD    78

p450: domain 1 of 1, from 26 to 490: score 314.1, E = 1.2e-97
                   *->PpgP.plPlfGnllqlgrgkdilhsvltklrkkYGpifrlylGsrpv
                      PpgP+plP++Gn l     +++ ++ ++++ k +G ++++++G  p
     F41B5.3    26    PPGPtPLPFMGNTLAMLL-EKPGYECFRRWTKQFGGVYTFWMGNIPY 71

                   vvlsgpelvkevLikkgeefsgrpdeawfatlsvpfrgkgilfsdgGprW
                   v++++++l ke ++++g+  ++ ++ +  ++l+ + + +gi+ s+g ++W
     F41B5.3    72 VIIGSYDLLKETFVRDGDTYKDKYPQPFNEKLR-GGM-YGIVESNG-HMW 118

                   kalRrlltptfrsfgmgklkslepriqeeaddlverlrktagepgsgrvi
                   + +Rr+ ++t+r+fg gk   + + i  e +d  ++   + g+
     F41B5.3   119 STHRRFALSTLRDFGLGKD-LMQEKILIEVEDIFRKYDAQLGKE-----Q 162

                   ditellsravlnvIcsilFgvrfdsledeealplvklvqellllvsspdh
                   di   l+ a  nvI+ ++Fg rfd  ++ee++++  lv+   + +  ++
     F41B5.3   163 DIQVVLNNAIANVINQTIFGYRFDETNQEEFERMRHLVEYQEKQF-ATVK 211

                   qlldlfp..lllylpgphl.rkfkearkelkdyldklieerretldddge
                    ++  f +++ ++lpg+ l++++ + r+ ++ ++d  ie +r+++d d
     F41B5.3   212 VYVEAFVptIGKFLPGKSLdQLLDDWRNSFYTFFDTQIENHRKKIDFD-- 259

                   eeekkksprdfldalllaknaemeeekdge.reselsdeelaatvldllf
                        +   d++ a l  +    ++e  ge +   +s+++   t+ldl
     F41B5.3   260 ----SEESQDYAEAYLKEQ---KKQEALGEfE--LFSNTQFSNTCLDLWL 300

                   AGteTTsstlswaLylLakhPevqaklreEidevigdhrkeisptydDlq
                   AG+ TT +t  w++ + + hP+v++k+ eE d+v+g++r    +t+ D +
     F41B5.3   301 AGVSTTNTTVNWTICYVLNHPDVLQKMNEEFDQVVGSDR---LVTMGDKN 347

                   nmPyldavIkEtLRlypvvpnlllpRvatkDteigGylIPKGtlVivnly
                   n+Py +av++E++R   +vp ++l++++tkDt+i+Gy ++KGt Vi  ++
     F41B5.3   348 NLPYFNAVLNESQRCANIVP-INLFHATTKDTVINGYPVKKGTGVIAQIS 396

                   slhrDpkvfpnPeeFdPeRFldengtaivnfkrksfaflPFGaGpRnClG
                    +++D+k+fp+P +F+P+RF deng     +++k +  +PF+ G+R+C+G
     F41B5.3   397 TVMLDEKIFPEPYKFNPDRFIDENG-----KPIKIEQLIPFSIGKRQCPG 441

                   erlArmElflfLatlLqrFeleplpgvdpppidetpiisglvlppkpykl
                   e+lArmE+flfLa +  r++ +p + +  p+ d++   +  v+p  ++ +
     F41B5.3   442 EGLARMEIFLFLANFFNRYKISP-SSKVFPNLDKKD--NVGVFPKDLHAI 488

                   kf<-*
                   +
     F41B5.3   489 LN    490

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