hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F41E6.2
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Query:  F41E6.2  CE10246    status:Confirmed TR:O16462 protein_id:AAB65952.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
DUF398   Domain of unknown function (DUF398)            102.2      1e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF398     1/1      25   101 ..     1    86 []   102.2    1e-26

Alignments of top-scoring domains:
DUF398: domain 1 of 1, from 25 to 101: score 102.2, E = 1e-26
                   *->sddnkCndeeLrkimeenideakaspdfgpddlseskraIqkaaeke
                      +++++C+++eL+  m+ ++           ddl  s++ Iqk ae
     F41E6.2    25    DSGFTCCNKELESAMKGAMGG---------DDLLGSADSIQKGAEGS 62

                   FggsFeVICsegdFsyvtntdgdlyCkvekdgvtClafk<-*
                   +gg+Fe++++ +dF+y+++++++++Ck+ek+g+++la++
     F41E6.2    63 LGGKFETVVALDDFAYKSHFKEGKSCKIEKNGQYALAWQ    101

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