Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm3/seq/F45H10.1
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Query: F45H10.1 CE10542 succinate semi-aldehyde dehydrogenase status:Partially_confirmed TR:O02266 protein_id:CAB04383.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
aldedh Aldehyde dehydrogenase family 576.5 1.7e-169 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
aldedh 1/1 25 485 .. 1 484 [. 576.5 1.7e-169
Alignments of top-scoring domains:
aldedh: domain 1 of 1, from 25 to 485: score 576.5, E = 1.7e-169
*->ewvdsasgktfevvNPankgevigrvpeataeDvdaAVkAAkeAfks
+w++s++g+ f+v NP+n +ev+ r+++ t +D+++AV +A e f
F45H10.1 25 KWTASETGNSFDVLNPFN-NEVVDRATNCTVKDAEKAVHSALEGFDK 70
GpwWa.kvpaseRariLrkladlieeredeLaaletlDlGKplaeAkgDt
Wa++ +a +R++iL+k+ +++ +re eLa l+t+++GKplaeA g
F45H10.1 71 ---WAhTYSAKQRGAILHKWFEILVQRETELATLLTKEQGKPLAEARG-- 115
evgraideiryyagwarklmgerrvipslatdgdeelnytrrePlGVvgv
e+++ + ++++yag+ar+++g v+ps + +l ++ reP+GVv+
F45H10.1 116 EIQYSAAYFDWYAGEARRVYG--QVVPSAVVN---RLHLHTREPIGVVAL 160
IsPWNFPlllalwklapALAaGNTVVlKPSEqTPltalllaelieeaGan
I+PWNFP +++++k+a+AL G+++V+KPS TPl+al+la eeaG
F45H10.1 161 IAPWNFPTAMIARKAAAALSVGCSAVVKPSGDTPLSALALAQTAEEAG-- 208
nlPkGVvnvvpGfG...aevGqaLlshpdidkisFTGSteVGklimeaAA
+P+GV+nv++ + +++ae+ +L++ d+ +isFTGSt+VGkl++++ A
F45H10.1 209 -IPAGVFNVITADHsntAEISKYLCESTDVSAISFTGSTPVGKLLLAQSA 257
aknlkkVtLELGGKsPvIVfdDADLdkAverivfgaFgnaGQvCiApsRl
+ +k+V+LELGG+ P IVfdDADLd+Av++++ +F+ +GQ+C+ + R+
F45H10.1 258 ST-VKRVCLELGGNAPLIVFDDADLDVAVNGTMATKFRCSGQTCVSANRI 306
lVhesiydeFveklkervk.klkliGdpldsdtniyGPlIseqqfdrvls
+Vhe+i+d+++ kl +++k+kl+ Gd+l + t++ GPl++++++d+++
F45H10.1 307 YVHEKIHDQYISKLAAAMKeKLV-LGDGLNPKTTQ-GPLVNQKAVDKCEL 354
yIedgkeeGAkvlcGGerdeskeylggGyyvqPTiftdVtpdMkImkEEI
++ d+ +G++++cGG+r e+ G ++PT++t+V+ + I++ EI
F45H10.1 355 LLSDALGKGSELICGGKRGEH------GTSYEPTLITNVQSNTNIAHTEI 398
FGPVlpiikfkdldEAIelaNdteYGLAayvFTkdilarafrvakaleaG
FGP+ ++ kf+d+ E++e aN+ GLA+yvF +d +r rva++le+G
F45H10.1 399 FGPIASVQKFRDEQEVLEAANNCRVGLAGYVFGRD-QSRLQRVARKLEVG 447
iVwvNDvcvhaaepqlPFGGvKqSSGiGrehgGkygleeYte<-*
+V+vN ++ + ++FGGvK+ SGiGre+ G +g++e+t+
F45H10.1 448 MVGVN--EGLISCAEAAFGGVKE-SGIGREG-GAQGIDEFTN 485