hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F52A8.5
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Query:  F52A8.5  CE05912   glycine cleavage system H protein like status:Confirmed TR:Q20634 protein_id:CAA95820.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
GCV_H    Glycine cleavage H-protein                     264.4    1.5e-75   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GCV_H      1/1      22   142 ..     1   130 []   264.4  1.5e-75

Alignments of top-scoring domains:
GCV_H: domain 1 of 1, from 22 to 142: score 264.4, E = 1.5e-75
                   *->LyYtkeHEmlFvWVkvegdGtatVGITdfAqeeLGDlVfveLPEvGt
                      ++Ytk+HE    WV ve++ ++tVGITdfA+e+LGD+Vf+eLP++Gt
     F52A8.5    22    RLYTKKHE----WVLVENG-VGTVGITDFATEQLGDVVFIELPDEGT 63

                   eVskgdslgavESVKaASevYaPvsGeVvEVNekLednPelINedPYedG
                   e+skgds+gavESVKaAS++YaP+sG+V+++N kLe++ +lIN++P+e+G
     F52A8.5    64 EISKGDSTGAVESVKAASDIYAPISGTVTQKNVKLEEEAGLINKSPFEKG 113

                   WiaKvKpgeesnleeleseLmtaeqYektlkee<-*
                   W++K+K+   ++++ele+ L+++eqY+k++k+e
     F52A8.5   114 WLYKLKV---KSADELEK-LLNEEQYAKFKKDE    142

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