hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F52H3.7b
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Query:  F52H3.7b  CE29330  locus:lec-2 galactoside-binding lectin status:Confirmed TR:Q9GNP7 protein_id:CAC70097.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Gal-bind_lectin Galactoside-binding lectin              281.8    8.7e-81   2
isoamylase_N    Isoamylase N-terminal domain              4.2        5.4   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Gal-bind_lectin   1/2      10   141 ..     1   139 []    95.1  2.3e-26
isoamylase_N      1/1     237   246 ..   112   121 .]     4.2      5.4
Gal-bind_lectin   2/2     149   277 ..     1   139 []   191.4  2.5e-54

Alignments of top-scoring domains:
Gal-bind_lectin: domain 1 of 2, from 10 to 141: score 95.1, E = 2.3e-26
                   *->pglvalnlglkpGktltVkGtVapknakrFavNlgkgskE..Endlv
                      p+ + l + + pG+tl+VkG+    ++ rF vNl++ + + + nd+
    F52H3.7b    10    PYRSKLVEPFEPGQTLIVKGKTGE-DSIRFTVNLHTNTADfsGNDVP 55

                   LHfNPRFneaHGDqntvVcNSkenGDNeWGtEqReaafPFqaGqpFeisI
                   LH+ +RF+ ++      V N++ +G  eWG+E+R +++P ++G++++i+I
    F52H3.7b    56 LHVSVRFD-EG----KLVFNTFSKG--EWGKEER-KSNPYKKGDDIDIRI 97

                   sveedkfkVkvndghef.eFphRlkleavqyLgikGDikltsikf<-*
                   + + +kf+++v  + e++e+ hR +l+++  + i+GD+ + +i +
    F52H3.7b    98 RAHDSKFQIFVD-QKEVkEYEHRVPLSSITHFTIDGDVLVNYIHW    141

isoamylase_N: domain 1 of 1, from 237 to 246: score 4.2, E = 5.4
                   *->PYAkavvgrp<-*
                      PYA+av++++
    F52H3.7b   237    PYAFAVTVNG    246

Gal-bind_lectin: domain 2 of 2, from 149 to 277: score 191.4, E = 2.5e-54
                   *->pglvaln.lglkpGktltVkGtVapknakrFavNlgkgskEEndlvL
                      p++++l+++gl pGktltV+G++++ +akrF++Nl+k++   +d++L
    F52H3.7b   149    PYESGLAgEGLAPGKTLTVFGIPEK-KAKRFHINLLKKN---GDIAL 191

                   HfNPRFneaHGDqntvVcNSkenGDNeWGtEqReaafPFqaGqpFeisIs
                   H+N RF+e+H     vV+NS++n+  +WG+E+Re+++PF++ ++F++ I+
    F52H3.7b   192 HLNARFDEKH-----VVRNSLINS--AWGNEEREGKMPFEKAVGFDLEIH 234

                   veedkfkVkvndghefeFphRlkleavqyLgikGDikltsikf<-*
                   +e+++f V+vn+++ ++++hRl++ +v++L+i GD+++t+i++
    F52H3.7b   235 NEPYAFAVTVNGERFASYAHRLSPDEVNGLQIGGDVEITGIQL    277

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