hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F56A11.5
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Query:  F56A11.5  CE17120    status:Partially_confirmed TR:O44517 protein_id:AAB92074.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
MOSC_N   MOSC N-terminal beta barrel domain             202.9    4.9e-57   1
MOSC     MOSC domain                                    191.2      4e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MOSC_N     1/1      45   168 ..     1   140 []   202.9  4.9e-57
MOSC       1/1     195   338 ..     1   157 []   191.2    4e-55

Alignments of top-scoring domains:
MOSC_N: domain 1 of 1, from 45 to 168: score 202.9, E = 4.9e-57
                   *->vatvssLyvYPIKSCagfsvsraerydltaqGlrfGlarDRewmvvn
                      v++++sL++YPIKSC+g +v++++   +t++G+r+G++ DR+++v+n
    F56A11.5    45    VGRIKSLHLYPIKSCKGKEVFQYR---CTPFGPRLGEYLDRHFLVIN 88

                   edGkflTaRrePrLvlirttidKAFEDWEPledglLtltAprGmppLevp
                   +dGkf+TaR++P++vli+t i          +dg++++++p G+++++++
    F56A11.5    89 SDGKFYTARTKPQMVLIETLI----------KDGIVRVSYP-GREDAQFK 127

                   ledpssnktqrrgvsvwgdsfsgldcGDaaaaqAWfSdfLgkp<-*
                   +ed+++nk+ r g+++++++ +g+dcGD a+a+ +fS++L++p
    F56A11.5   128 IEDVKANKDLRSGFLHVDLRTDGYDCGD-AVAE-FFSNVLEEP    168

MOSC: domain 1 of 1, from 195 to 338: score 191.2, E = 4e-55
                   *->etglegDelaqadkvhhgdedravllisreSladLnarLrggrpldp
                      e++   D+       +++d  +++++ s++Sl+dLn++L  + ++
    F56A11.5   195    EVPKRIDD------TAYADL-APYMITSQASLDDLNSKL--DQNVSS 232

                   grFReNlvvsGleafaedigdrirIGdvllevsgpcsRCvlttvdpeTGe
                    +FR+++vv+ ++a++ed++  +rIGdv++++++pc+RC+lttv+peTG
    F56A11.5   233 INFRPCIVVDDCAAWDEDKWLDLRIGDVEMQCFKPCTRCILTTVNPETGT 282

                   rsaekeplktlrkfrratvh.kk.fggkglfGvylrhvlDtaVlrpGtir
                   ++++++plk+lr+fr+ +++ +++fg++++fGv+++      + + G+i+
    F56A11.5   283 KDKDMQPLKKLREFRLGPGKlRQeFGESPIFGVNAG------LVKTGYIH 326

                   vGDevevlerpe<-*
                   vG++v++ ++p+
    F56A11.5   327 VGQTVWAKYKPS    338

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