Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm3/seq/F56C11.6
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Query: F56C11.6 CE17905 carboxylesterases status:Partially_confirmed TR:O44977 protein_id:AAB97558.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
COesterase Carboxylesterase 562.9 2.1e-165 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
COesterase 1/1 1 535 [. 1 592 [] 562.9 2.1e-165
Alignments of top-scoring domains:
COesterase: domain 1 of 1, from 1 to 535: score 562.9, E = 2.1e-165
*->mglllllllllllllavvataptspedpvVeTsyvgGkvrGlrvkvd
mg++l++ +++l ++ at+ G+++G+ ++
F56C11.6 1 MGGFLSK--HHHLTAVHDATC---------------GPIKGVGYEQE 30
ggnkpvyaFlGIPYAkPPvGeLRFkkPqPipepWtgvldATkygpaCpQ.
+g v+ FlGIPYA+PP+G LRFkkP+ + +Wt++ld+ ++gp+ pQ+
F56C11.6 31 DG-SVVEGFLGIPYAEPPIGALRFKKPVA-HRKWTEPLDCVRFGPRSPQn 78
ndlgfpgfpLAlevmgsemwnkntgvsmSEDCLYLNVytPklasenk...
++l+ ++ ++g + +E CL LNV+tPk+ s n+ ++
F56C11.6 79 DELL-------------GQFVNTVG-KSEEHCLSLNVFTPKWES-NEwpd 113
klPVmVwIHGGGFqsGsassfslddydgpdlaaekdVVVVtiNYRLGalG
++PVmV+IHGGGF + s+s ++ +++ + +kdVVVVtiNYRLG+lG
F56C11.6 114 GFPVMVFIHGGGFAVHSSS--NYGCASIARNLCTKDVVVVTINYRLGVLG 161
FLstgdselpvppGNaGLlDQvlALrWVqeNIaaFGGDPdnVTlFGeSAG
F++tgd++++ GN+GL+DQ++AL+WVqeNI +F GDPdnVT+FG+SAG
F56C11.6 162 FFTTGDEVCR---GNLGLWDQTAALEWVQENIQSFRGDPDNVTIFGQSAG 208
AaSVsllllSppqsrgLFhrAIlqSGsalspwaits.pearnrakrlAkl
+aSV+ll lS p+srgLF+rAI++ G+ +++a++ +++ + ++++A++
F56C11.6 209 GASVDLLCLS-PHSRGLFNRAIPMAGNGECDFAMRTsEQQAQLSREFARY 257
lGCpgedst..elleCLRkksaeelldaqeklllldevgffpffaFgPvv
lG++g+d+++++ll++ +++ ++ + + + ++++ F+P++
F56C11.6 258 LGWEGDDNDseDLLQFIDQQPLYKIEMGINPKRGFKHSQAGSLY-FVPNF 306
dGdtpdaflpkdPeellkegnfnkvPlliGvtsdEGllflayll.dp.es
dGd f+pk+ +l+ke ++k ++++G+t++EGl+f+a + +++
F56C11.6 307 DGD----FFPKPLNQLRKE--APKMQIMTGTTKYEGLFFIALGAlSKnP- 349
adllslldnedlflellpellpgaselltpklreeiadalkeeYtdd.dd
e + + ++ + + + ++ +++ + ++++Y+ + ++
F56C11.6 350 ---------EG-IKKFMGRIFK-ECDYG--ERADDVLQMVYDFYFKGvHP 386
.nseesrealvdllsDylFvcpilrlaaarlakggapvYlYrFdyrssfs
++ e++ ++v++++Dy ++++ ++ +a+ +++ + vY+Y+Fdy++s
F56C11.6 387 kDHEKNMHQIVKFIGDYSINYG-TYRLANIMTDLQHDVYFYQFDYHNS-- 433
fnqylinllwppwmgvsHgdelsYvFGnpls.k.lyteeeeklssrrmmr
+ +++ ++ p+ g +H++e Yv+G ++++k +++ ++k++ + m++
F56C11.6 434 -AGFGVFRWLLPFLGSTHCTEMRYVLGKGIIsKfRPNDNDKKML-HVMTT 481
ywtnFAktGnPNngessglpkWppytseeqkYyllntlltistk.lreed
y+tnFAk+GnP nge+ + +W++ +s ++++++i+ +++++ +
F56C11.6 482 YFTNFAKYGNP-NGENQETGEWQKHDSA-----HPFRHFKIDLDdSEMVE 525
pr.kvkcafw<-*
+++ + w
F56C11.6 526 DYqERRAELW 535