hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F58E6.5
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Query:  F58E6.5  CE06020    status:Partially_confirmed TR:Q20981 protein_id:CAA94775.1

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N
--------   -----------                                  -----    ------- ---
MSP_domain MSP (Major sperm protein) domain              87.7    1.8e-24   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
MSP_domain   1/1       9   123 ..     1   138 []    87.7  1.8e-24

Alignments of top-scoring domains:
MSP_domain: domain 1 of 1, from 9 to 123: score 87.7, E = 1.8e-24
                   *->elklePpvtvtvfpnnlpfdkqggtstltltNpsdkriaFKvKtTnn
                      +++++P+++vt+ p   + +   ++ +++++N+s++ +a+K+K T +
     F58E6.5     9    KVVFNPSKSVTFAPV--EKK---QAVSIEVINNSTSDVAVKFKNTGP 50

                   klYrVrPvyGileP.gesvniavtrnvvVtlqrfkglpkpddknkdKfvv
                   ++Y+ +P+ +++  ++++v  ++          fkglpk+++k +d+f+v
     F58E6.5    51 NVYKTQPPQAKIGVgEKKVFKCI----------FKGLPKEKCKTNDRFTV 90

                   qyleapsedadrqqkraareafkaaaaagvlvgerkipvvfe<-*
                    y+ a+++++        ++a+k+a++++  ++ +ki ++f+
     F58E6.5    91 VYIAASKNVV-------IEKAWKNAHKTC--TMKHKIAILFQ    123

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