hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F59F3.6
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Query:  F59F3.6  CE31019    status:Confirmed TN:CAD36494 protein_id:CAD36494.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
K_tetra  K+ channel tetramerisation domain               27.1    1.9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
K_tetra    1/1       9    72 ..     1    73 [.    27.1  1.9e-06

Alignments of top-scoring domains:
K_tetra: domain 1 of 1, from 9 to 72: score 27.1, E = 1.9e-06
                   *->ErvrLNVGGkrFeTsks.TLtrfkpdTlLgrllktdsdvhearlrlc
                      +++++NVGGk++ +++++ L   +p + L + +k          +l
     F59F3.6     9    DILNINVGGKKYTVRRTdMLA--DPRSKLAEWFKPG--------TLK 45

                   dfyddetgEyFFDRsPkhFetILnfYR<-*
                   +  +d+ g y+ DR+ k F++IL ++R
     F59F3.6    46 PIATDKGGNYYLDRDAKCFRHILAYLR    72

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